BLASTX nr result

ID: Coptis24_contig00019202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019202
         (1543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26181.3| unnamed protein product [Vitis vinifera]              464   e-128
ref|XP_002280269.1| PREDICTED: UPF0613 protein PB24D3.06c [Vitis...   464   e-128
ref|XP_002311828.1| predicted protein [Populus trichocarpa] gi|2...   461   e-127
ref|XP_002517152.1| catalytic, putative [Ricinus communis] gi|22...   447   e-123
ref|XP_004169893.1| PREDICTED: UPF0613 protein PB24D3.06c-like [...   443   e-122

>emb|CBI26181.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score =  464 bits (1193), Expect = e-128
 Identities = 233/298 (78%), Positives = 253/298 (84%)
 Frame = -2

Query: 1215 DVSSGGGSVNPKKNQFRGLLFKYGPKSIQVAFKTGDFKQQVIFLGGLTDGFLATEYLEPL 1036
            D S  GG VN +KNQF G+LFKYGPK +QVAFKTG++KQQVIF+GGLTDG LATEYLEPL
Sbjct: 9    DPSGSGGPVN-RKNQFHGVLFKYGPKPVQVAFKTGNYKQQVIFIGGLTDGLLATEYLEPL 67

Query: 1035 SVALEKEKWSLVQFXXXXXXXXXXXXXLKQDAMELDQLISYLINKEDSEGVVLVGHSTGC 856
            ++ALE EKWSLVQ              LKQDA+ELDQLISYLINKEDSEGVVL+GHSTGC
Sbjct: 68   AMALENEKWSLVQLLLSSSYSGYGISSLKQDAVELDQLISYLINKEDSEGVVLLGHSTGC 127

Query: 855  QVIVHYMSTNAACSRAVRAAILQAPVSDREYRATLPETASMIDLASTMIGEGRGMDLMPR 676
            Q IVHYM TNAACSRAVRAAILQAPVSDREYRATLP+TA+MIDLASTMI EGRG++LMPR
Sbjct: 128  QDIVHYMRTNAACSRAVRAAILQAPVSDREYRATLPQTAAMIDLASTMISEGRGLELMPR 187

Query: 675  EADPEAPMTAYRYHSLCAYMGXXXXXXXXXXXDQLRTRLGHMSSTPCQVIFSMADEYVPE 496
            EAD  AP+TAYRYHSLCAYMG           DQLR RLGHMS TPCQVIFSMADEYVPE
Sbjct: 188  EADEGAPITAYRYHSLCAYMGDDDMFSSDLSDDQLRMRLGHMSQTPCQVIFSMADEYVPE 247

Query: 495  YVDKKALVERLCRALGGAEKVEIEWGNHSLSNRVEEAVKVIVNFIKTEGPKGWDDPWS 322
            YVDKKALVERLCRALGGAEKVEIEWGNHSLSNRV EAV+ I++F+  EGPKGWDDPW+
Sbjct: 248  YVDKKALVERLCRALGGAEKVEIEWGNHSLSNRVAEAVQAIIDFVIREGPKGWDDPWN 305


>ref|XP_002280269.1| PREDICTED: UPF0613 protein PB24D3.06c [Vitis vinifera]
          Length = 347

 Score =  464 bits (1193), Expect = e-128
 Identities = 233/298 (78%), Positives = 253/298 (84%)
 Frame = -2

Query: 1215 DVSSGGGSVNPKKNQFRGLLFKYGPKSIQVAFKTGDFKQQVIFLGGLTDGFLATEYLEPL 1036
            D S  GG VN +KNQF G+LFKYGPK +QVAFKTG++KQQVIF+GGLTDG LATEYLEPL
Sbjct: 51   DPSGSGGPVN-RKNQFHGVLFKYGPKPVQVAFKTGNYKQQVIFIGGLTDGLLATEYLEPL 109

Query: 1035 SVALEKEKWSLVQFXXXXXXXXXXXXXLKQDAMELDQLISYLINKEDSEGVVLVGHSTGC 856
            ++ALE EKWSLVQ              LKQDA+ELDQLISYLINKEDSEGVVL+GHSTGC
Sbjct: 110  AMALENEKWSLVQLLLSSSYSGYGISSLKQDAVELDQLISYLINKEDSEGVVLLGHSTGC 169

Query: 855  QVIVHYMSTNAACSRAVRAAILQAPVSDREYRATLPETASMIDLASTMIGEGRGMDLMPR 676
            Q IVHYM TNAACSRAVRAAILQAPVSDREYRATLP+TA+MIDLASTMI EGRG++LMPR
Sbjct: 170  QDIVHYMRTNAACSRAVRAAILQAPVSDREYRATLPQTAAMIDLASTMISEGRGLELMPR 229

Query: 675  EADPEAPMTAYRYHSLCAYMGXXXXXXXXXXXDQLRTRLGHMSSTPCQVIFSMADEYVPE 496
            EAD  AP+TAYRYHSLCAYMG           DQLR RLGHMS TPCQVIFSMADEYVPE
Sbjct: 230  EADEGAPITAYRYHSLCAYMGDDDMFSSDLSDDQLRMRLGHMSQTPCQVIFSMADEYVPE 289

Query: 495  YVDKKALVERLCRALGGAEKVEIEWGNHSLSNRVEEAVKVIVNFIKTEGPKGWDDPWS 322
            YVDKKALVERLCRALGGAEKVEIEWGNHSLSNRV EAV+ I++F+  EGPKGWDDPW+
Sbjct: 290  YVDKKALVERLCRALGGAEKVEIEWGNHSLSNRVAEAVQAIIDFVIREGPKGWDDPWN 347


>ref|XP_002311828.1| predicted protein [Populus trichocarpa] gi|222851648|gb|EEE89195.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  461 bits (1187), Expect = e-127
 Identities = 229/286 (80%), Positives = 248/286 (86%)
 Frame = -2

Query: 1179 KNQFRGLLFKYGPKSIQVAFKTGDFKQQVIFLGGLTDGFLATEYLEPLSVALEKEKWSLV 1000
            KNQFRG+LFKYGPK IQVAFKTGD+KQQVIF+GGLTDGFLATEYLEPL++AL+KEKWSLV
Sbjct: 1    KNQFRGVLFKYGPKPIQVAFKTGDYKQQVIFIGGLTDGFLATEYLEPLAIALDKEKWSLV 60

Query: 999  QFXXXXXXXXXXXXXLKQDAMELDQLISYLINKEDSEGVVLVGHSTGCQVIVHYMSTNAA 820
            Q              LKQDA ELDQL+SYLINKEDSEGVVL+GHSTGCQ IVHYM TNAA
Sbjct: 61   QLLMSSSYTGYGTTSLKQDASELDQLVSYLINKEDSEGVVLLGHSTGCQDIVHYMRTNAA 120

Query: 819  CSRAVRAAILQAPVSDREYRATLPETASMIDLASTMIGEGRGMDLMPREADPEAPMTAYR 640
            CSRAVRAAILQAPVSDREYRATLPETASMIDLASTMI EGR  +LMP+EADP AP+TAYR
Sbjct: 121  CSRAVRAAILQAPVSDREYRATLPETASMIDLASTMIAEGRSSELMPKEADPSAPITAYR 180

Query: 639  YHSLCAYMGXXXXXXXXXXXDQLRTRLGHMSSTPCQVIFSMADEYVPEYVDKKALVERLC 460
            YHSLCAYMG           DQLR RLGHMS+TPCQVIFSMADEYVPEYVDKKALVERLC
Sbjct: 181  YHSLCAYMGDDDLFSSDLSDDQLRMRLGHMSNTPCQVIFSMADEYVPEYVDKKALVERLC 240

Query: 459  RALGGAEKVEIEWGNHSLSNRVEEAVKVIVNFIKTEGPKGWDDPWS 322
            R +GGAEKVEIE GNHSLSNRV+EAV+ IV+F+K +GPKGWDDPW+
Sbjct: 241  RVMGGAEKVEIEHGNHSLSNRVQEAVQAIVDFVKRDGPKGWDDPWN 286


>ref|XP_002517152.1| catalytic, putative [Ricinus communis] gi|223543787|gb|EEF45315.1|
            catalytic, putative [Ricinus communis]
          Length = 351

 Score =  447 bits (1149), Expect = e-123
 Identities = 223/298 (74%), Positives = 251/298 (84%), Gaps = 2/298 (0%)
 Frame = -2

Query: 1209 SSGGGSVNP--KKNQFRGLLFKYGPKSIQVAFKTGDFKQQVIFLGGLTDGFLATEYLEPL 1036
            SS   ++ P   KNQFRG+LFKYGPK+IQVAFKTG+ KQQV+F+GGLTDGFLATEYLEPL
Sbjct: 54   SSSSDNLGPIKAKNQFRGVLFKYGPKAIQVAFKTGEHKQQVVFIGGLTDGFLATEYLEPL 113

Query: 1035 SVALEKEKWSLVQFXXXXXXXXXXXXXLKQDAMELDQLISYLINKEDSEGVVLVGHSTGC 856
            ++AL+KEKWSLVQ              L+QDAME+DQLISYLINKE+SEGVVL+GHSTGC
Sbjct: 114  AIALDKEKWSLVQLLMSSSYSGYGTSSLQQDAMEIDQLISYLINKENSEGVVLLGHSTGC 173

Query: 855  QVIVHYMSTNAACSRAVRAAILQAPVSDREYRATLPETASMIDLASTMIGEGRGMDLMPR 676
            Q IVHYM TNAACSRAVRAAILQAPVSDREY ATLP+TA+MIDLASTMI EGRG +LMPR
Sbjct: 174  QDIVHYMRTNAACSRAVRAAILQAPVSDREYNATLPKTAAMIDLASTMIAEGRGSELMPR 233

Query: 675  EADPEAPMTAYRYHSLCAYMGXXXXXXXXXXXDQLRTRLGHMSSTPCQVIFSMADEYVPE 496
            EADP +P+TA RYHSLCAYMG           DQLR RLGHM +TPCQVIFSMADEY+PE
Sbjct: 234  EADPSSPITASRYHSLCAYMGDDDMFSSDLTDDQLRMRLGHMCNTPCQVIFSMADEYIPE 293

Query: 495  YVDKKALVERLCRALGGAEKVEIEWGNHSLSNRVEEAVKVIVNFIKTEGPKGWDDPWS 322
            YVDKKALVERLCRA+GGAEKVEIE GNHS+SNRV EAV+ I++F+K EGP GWDDPW+
Sbjct: 294  YVDKKALVERLCRAMGGAEKVEIEHGNHSVSNRVGEAVQAIMDFVKREGPSGWDDPWN 351


>ref|XP_004169893.1| PREDICTED: UPF0613 protein PB24D3.06c-like [Cucumis sativus]
          Length = 361

 Score =  443 bits (1140), Expect = e-122
 Identities = 223/302 (73%), Positives = 251/302 (83%), Gaps = 5/302 (1%)
 Frame = -2

Query: 1215 DVSSG---GGSVNP--KKNQFRGLLFKYGPKSIQVAFKTGDFKQQVIFLGGLTDGFLATE 1051
            + SSG   G S  P  KKN FRG LFKYGPK IQVAFKTGD+KQQVIF+GGLTDGF+ATE
Sbjct: 59   NTSSGSPVGDSPGPVVKKNHFRGFLFKYGPKPIQVAFKTGDYKQQVIFIGGLTDGFMATE 118

Query: 1050 YLEPLSVALEKEKWSLVQFXXXXXXXXXXXXXLKQDAMELDQLISYLINKEDSEGVVLVG 871
            YLE L++AL+KEKWSLVQ              L+QDA ELDQL+SYLINKEDSEGVVL+G
Sbjct: 119  YLESLAIALDKEKWSLVQILLSSSYSGYGTSSLQQDAKELDQLVSYLINKEDSEGVVLLG 178

Query: 870  HSTGCQVIVHYMSTNAACSRAVRAAILQAPVSDREYRATLPETASMIDLASTMIGEGRGM 691
            HSTGCQ IVHYM TNAACSRAVR AILQAPVSDREYRATLPETA+MIDLASTMI EGRG+
Sbjct: 179  HSTGCQDIVHYMRTNAACSRAVRGAILQAPVSDREYRATLPETAAMIDLASTMISEGRGL 238

Query: 690  DLMPREADPEAPMTAYRYHSLCAYMGXXXXXXXXXXXDQLRTRLGHMSSTPCQVIFSMAD 511
            DLMPREADP +P+TA RY+SLC+YMG           DQL+ R+GHM++TPCQVIFSM D
Sbjct: 239  DLMPREADPSSPITATRYYSLCSYMGDDDMFSSDLSDDQLKLRVGHMANTPCQVIFSMGD 298

Query: 510  EYVPEYVDKKALVERLCRALGGAEKVEIEWGNHSLSNRVEEAVKVIVNFIKTEGPKGWDD 331
            EYVP+YVDKK+LV RLC+A+GGAEKVEIE GNHSLSNRV EAV+VIV+F++ EGPKGWDD
Sbjct: 299  EYVPDYVDKKSLVNRLCKAMGGAEKVEIEHGNHSLSNRVNEAVEVIVDFVRREGPKGWDD 358

Query: 330  PW 325
            PW
Sbjct: 359  PW 360


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