BLASTX nr result

ID: Coptis24_contig00019189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019189
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518104.1| transcription factor, putative [Ricinus comm...    69   5e-10
ref|XP_002300173.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CCA29095.1| putative MYB transcription factor [Rosa rugosa] ...    64   1e-08
gb|ABK94861.1| unknown [Populus trichocarpa]                           64   1e-08
ref|XP_002268698.2| PREDICTED: uncharacterized protein LOC100250...    64   2e-08

>ref|XP_002518104.1| transcription factor, putative [Ricinus communis]
           gi|223542700|gb|EEF44237.1| transcription factor,
           putative [Ricinus communis]
          Length = 303

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -1

Query: 463 ARIGDCS-DSCLTSTGSPLSPLGVGLQSAAIKKRQRPMFASGESLTWE 323
           ARIGDCS +SCLTSTGSP+SP+GVG  +A+IKKR RP+F +G+SL  E
Sbjct: 241 ARIGDCSVESCLTSTGSPVSPMGVGSHTASIKKRPRPIFGNGDSLPLE 288


>ref|XP_002300173.1| predicted protein [Populus trichocarpa] gi|222847431|gb|EEE84978.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/45 (68%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
 Frame = -1

Query: 463 ARIGDCS-DSCLTSTGSPLSPLGVGLQSAAIKKRQRPMFASGESL 332
           AR+GDCS +SCLTSTGSP+SP+GVG Q A+ KKR RP+F +G+SL
Sbjct: 241 ARVGDCSVESCLTSTGSPVSPMGVGAQVASTKKRSRPVFGNGDSL 285


>emb|CCA29095.1| putative MYB transcription factor [Rosa rugosa]
           gi|327412625|emb|CCA29101.1| putative MYB transcription
           factor [Rosa rugosa]
          Length = 307

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/48 (66%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
 Frame = -1

Query: 463 ARIGDCS-DSCLTSTGSPLSPLGVGLQSAAIKKRQRPMFASGESLTWE 323
           ARIG+CS DSCLTSTGSP SP+G+   +AA+KKRQRP F++G+SL  E
Sbjct: 245 ARIGNCSVDSCLTSTGSPGSPMGMSSLAAAMKKRQRPFFSNGDSLPLE 292


>gb|ABK94861.1| unknown [Populus trichocarpa]
          Length = 309

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = -1

Query: 463 ARIGDCS-DSCLTSTGSPLSPLGVGLQSAAIKKRQRPMFASGESLTWE 323
           ARIGDCS +SCLTST SP+SP+GVG Q A+ KKR RP+  +G+SL +E
Sbjct: 245 ARIGDCSVESCLTSTSSPVSPMGVGSQVASTKKRSRPVLGNGDSLPFE 292


>ref|XP_002268698.2| PREDICTED: uncharacterized protein LOC100250267 [Vitis vinifera]
          Length = 307

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/48 (62%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = -1

Query: 463 ARIGDCS-DSCLTSTGSPLSPLGVGLQSAAIKKRQRPMFASGESLTWE 323
           ARIGDCS DSCLTS+GSP+SP+G   + A +KKR RP+F  G SL  E
Sbjct: 245 ARIGDCSVDSCLTSSGSPISPMGASSRGAVMKKRSRPLFTGGSSLALE 292


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