BLASTX nr result

ID: Coptis24_contig00019113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019113
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529941.1| PREDICTED: BUD13 homolog [Glycine max]             86   4e-15
ref|XP_002532943.1| conserved hypothetical protein [Ricinus comm...    82   3e-14
ref|XP_002329534.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002278878.1| PREDICTED: BUD13 homolog [Vitis vinifera] gi...    82   3e-14
gb|EEE68144.1| hypothetical protein OsJ_26249 [Oryza sativa Japo...    77   1e-12

>ref|XP_003529941.1| PREDICTED: BUD13 homolog [Glycine max]
          Length = 568

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 24/117 (20%)
 Frame = +1

Query: 43  KPQVNEDIEVRRMKRMEMIRSRRPYHAISEDGSGWIAVS----NSVNHHGNQSPVQELQG 210
           KP ++EDIEV+RMKR+E +R+RRPYHAISEDGSGW+++S    N +N   + SP ++ +G
Sbjct: 68  KPLIDEDIEVKRMKRLEQVRARRPYHAISEDGSGWVSLSSNSENPINSINDMSPPRKRKG 127

Query: 211 K--------KRLNSISPD------NDLSPMRRSHSQTNERSD------SPDLSPPRR 321
                    KR ++ SPD       D+SP RR     +   D      + DLSPPR+
Sbjct: 128 ADLSPHQQLKRNDTPSPDYGTSDLQDISPPRRRGRHDSPSQDALHGSVASDLSPPRK 184


>ref|XP_002532943.1| conserved hypothetical protein [Ricinus communis]
           gi|223527294|gb|EEF29447.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 570

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 12/114 (10%)
 Frame = +1

Query: 43  KPQVNEDIEVRRMKRMEMIRSRRPYHAISEDGSGWIAVSNSVNHHGNQSPVQELQGKKRL 222
           KPQV+EDIEV+RMKR+E +R RR Y+ I+EDGSGW++++++  + G+ SP +  + +   
Sbjct: 69  KPQVDEDIEVKRMKRLEHLRLRRGYNVIAEDGSGWVSLASNGENVGDISPPRRRRARNDT 128

Query: 223 NSISPDN----------DLSP--MRRSHSQTNERSDSPDLSPPRRNRISSQLSS 348
            S  P            DLSP   RR H +T     +PD SPPR+ +  +   S
Sbjct: 129 PSPEPGERDFDAGRKHADLSPPRQRRRHHRTQSPDANPDSSPPRKQKARNDTPS 182


>ref|XP_002329534.1| predicted protein [Populus trichocarpa] gi|222870243|gb|EEF07374.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 20/121 (16%)
 Frame = +1

Query: 46  PQVNEDIEVRRMKRMEMIRSRRPYHAISEDGSGWIAV----SNSVNHHGNQSPVQELQGK 213
           PQV+EDIEV+RMKR+E+IR+RR Y+AI+EDGSGW+ +    +NS + + + SP+ + + +
Sbjct: 71  PQVDEDIEVKRMKRLELIRARRAYNAIAEDGSGWVILPPNHANSADPYPDMSPLHKRKVR 130

Query: 214 ----------KRLNSISPDNDLSPMRRSHSQTNERSDSP------DLSPPRRNRISSQLS 345
                     K L++   D DLSP R+   Q +  S +P      DLSPPR  R  +   
Sbjct: 131 NDTPSPEHEGKPLHNGGDDADLSPPRQQQRQHHSPSPAPDTNLNSDLSPPRNRRYRNDTP 190

Query: 346 S 348
           S
Sbjct: 191 S 191


>ref|XP_002278878.1| PREDICTED: BUD13 homolog [Vitis vinifera]
           gi|297742135|emb|CBI33922.3| unnamed protein product
           [Vitis vinifera]
          Length = 480

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/101 (41%), Positives = 61/101 (60%)
 Frame = +1

Query: 43  KPQVNEDIEVRRMKRMEMIRSRRPYHAISEDGSGWIAVSNSVNHHGNQSPVQELQGKKRL 222
           KPQ++EDIEV+RMKR+E +RS+RPYHA+SEDGSGW+++S +  H                
Sbjct: 66  KPQIDEDIEVKRMKRLEQLRSKRPYHALSEDGSGWVSISAAPTHS--------------- 110

Query: 223 NSISPDNDLSPMRRSHSQTNERSDSPDLSPPRRNRISSQLS 345
           +S   ++D+SP RR  ++ +  S  P+  P    R  S LS
Sbjct: 111 DSGDQNSDVSPPRRQRARYDTPSPEPEPRPSDSGREGSDLS 151


>gb|EEE68144.1| hypothetical protein OsJ_26249 [Oryza sativa Japonica Group]
          Length = 582

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 12/107 (11%)
 Frame = +1

Query: 43  KPQVNEDIEVRRMKRMEMIRSRRPYHAISEDGSGWIAVSNSVNHHGNQSPVQELQGKKRL 222
           +P V+EDIEV+RM+R+E IR+ RPY+AI+EDGSGW+ V+   +  G       L G++R 
Sbjct: 77  RPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVTVAAPEDSDGG------LTGRRRR 130

Query: 223 NSI-SPD------NDLSPMRRSHSQTNERSD-----SPDLSPPRRNR 327
           N   SP+       DLSP RR   Q     D       DLSPPR+ R
Sbjct: 131 NDTPSPERGGAGRKDLSPPRRRQRQDTPSPDPRDAAGKDLSPPRQRR 177


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