BLASTX nr result
ID: Coptis24_contig00019113
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019113 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003529941.1| PREDICTED: BUD13 homolog [Glycine max] 86 4e-15 ref|XP_002532943.1| conserved hypothetical protein [Ricinus comm... 82 3e-14 ref|XP_002329534.1| predicted protein [Populus trichocarpa] gi|2... 82 3e-14 ref|XP_002278878.1| PREDICTED: BUD13 homolog [Vitis vinifera] gi... 82 3e-14 gb|EEE68144.1| hypothetical protein OsJ_26249 [Oryza sativa Japo... 77 1e-12 >ref|XP_003529941.1| PREDICTED: BUD13 homolog [Glycine max] Length = 568 Score = 85.5 bits (210), Expect = 4e-15 Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 24/117 (20%) Frame = +1 Query: 43 KPQVNEDIEVRRMKRMEMIRSRRPYHAISEDGSGWIAVS----NSVNHHGNQSPVQELQG 210 KP ++EDIEV+RMKR+E +R+RRPYHAISEDGSGW+++S N +N + SP ++ +G Sbjct: 68 KPLIDEDIEVKRMKRLEQVRARRPYHAISEDGSGWVSLSSNSENPINSINDMSPPRKRKG 127 Query: 211 K--------KRLNSISPD------NDLSPMRRSHSQTNERSD------SPDLSPPRR 321 KR ++ SPD D+SP RR + D + DLSPPR+ Sbjct: 128 ADLSPHQQLKRNDTPSPDYGTSDLQDISPPRRRGRHDSPSQDALHGSVASDLSPPRK 184 >ref|XP_002532943.1| conserved hypothetical protein [Ricinus communis] gi|223527294|gb|EEF29447.1| conserved hypothetical protein [Ricinus communis] Length = 570 Score = 82.4 bits (202), Expect = 3e-14 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 12/114 (10%) Frame = +1 Query: 43 KPQVNEDIEVRRMKRMEMIRSRRPYHAISEDGSGWIAVSNSVNHHGNQSPVQELQGKKRL 222 KPQV+EDIEV+RMKR+E +R RR Y+ I+EDGSGW++++++ + G+ SP + + + Sbjct: 69 KPQVDEDIEVKRMKRLEHLRLRRGYNVIAEDGSGWVSLASNGENVGDISPPRRRRARNDT 128 Query: 223 NSISPDN----------DLSP--MRRSHSQTNERSDSPDLSPPRRNRISSQLSS 348 S P DLSP RR H +T +PD SPPR+ + + S Sbjct: 129 PSPEPGERDFDAGRKHADLSPPRQRRRHHRTQSPDANPDSSPPRKQKARNDTPS 182 >ref|XP_002329534.1| predicted protein [Populus trichocarpa] gi|222870243|gb|EEF07374.1| predicted protein [Populus trichocarpa] Length = 549 Score = 82.4 bits (202), Expect = 3e-14 Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 20/121 (16%) Frame = +1 Query: 46 PQVNEDIEVRRMKRMEMIRSRRPYHAISEDGSGWIAV----SNSVNHHGNQSPVQELQGK 213 PQV+EDIEV+RMKR+E+IR+RR Y+AI+EDGSGW+ + +NS + + + SP+ + + + Sbjct: 71 PQVDEDIEVKRMKRLELIRARRAYNAIAEDGSGWVILPPNHANSADPYPDMSPLHKRKVR 130 Query: 214 ----------KRLNSISPDNDLSPMRRSHSQTNERSDSP------DLSPPRRNRISSQLS 345 K L++ D DLSP R+ Q + S +P DLSPPR R + Sbjct: 131 NDTPSPEHEGKPLHNGGDDADLSPPRQQQRQHHSPSPAPDTNLNSDLSPPRNRRYRNDTP 190 Query: 346 S 348 S Sbjct: 191 S 191 >ref|XP_002278878.1| PREDICTED: BUD13 homolog [Vitis vinifera] gi|297742135|emb|CBI33922.3| unnamed protein product [Vitis vinifera] Length = 480 Score = 82.4 bits (202), Expect = 3e-14 Identities = 42/101 (41%), Positives = 61/101 (60%) Frame = +1 Query: 43 KPQVNEDIEVRRMKRMEMIRSRRPYHAISEDGSGWIAVSNSVNHHGNQSPVQELQGKKRL 222 KPQ++EDIEV+RMKR+E +RS+RPYHA+SEDGSGW+++S + H Sbjct: 66 KPQIDEDIEVKRMKRLEQLRSKRPYHALSEDGSGWVSISAAPTHS--------------- 110 Query: 223 NSISPDNDLSPMRRSHSQTNERSDSPDLSPPRRNRISSQLS 345 +S ++D+SP RR ++ + S P+ P R S LS Sbjct: 111 DSGDQNSDVSPPRRQRARYDTPSPEPEPRPSDSGREGSDLS 151 >gb|EEE68144.1| hypothetical protein OsJ_26249 [Oryza sativa Japonica Group] Length = 582 Score = 77.4 bits (189), Expect = 1e-12 Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 12/107 (11%) Frame = +1 Query: 43 KPQVNEDIEVRRMKRMEMIRSRRPYHAISEDGSGWIAVSNSVNHHGNQSPVQELQGKKRL 222 +P V+EDIEV+RM+R+E IR+ RPY+AI+EDGSGW+ V+ + G L G++R Sbjct: 77 RPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVTVAAPEDSDGG------LTGRRRR 130 Query: 223 NSI-SPD------NDLSPMRRSHSQTNERSD-----SPDLSPPRRNR 327 N SP+ DLSP RR Q D DLSPPR+ R Sbjct: 131 NDTPSPERGGAGRKDLSPPRRRQRQDTPSPDPRDAAGKDLSPPRQRR 177