BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019070
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   121   5e-26
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   121   5e-26
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   121   5e-26
ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...   121   7e-26
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              120   9e-26

>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
           sativus]
          Length = 1959

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/73 (78%), Positives = 67/73 (91%)
 Frame = +1

Query: 1   LICGPLGADFDGDCIHIFYPQSLAARAEVLELFSVEQQLLSSHTGSLNLQLANDALLSLK 180
           LICGPL ADFDGDCIH+FYPQS+AA+AEVL LFSVE+QLLSSH+G+LNLQLAND+LLSLK
Sbjct: 441 LICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLK 500

Query: 181 IMFKNFFFDKATA 219
           +MF+ +F  KA A
Sbjct: 501 MMFRKYFLGKAAA 513


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
           subunit 1-like [Cucumis sativus]
          Length = 2019

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/73 (78%), Positives = 67/73 (91%)
 Frame = +1

Query: 1   LICGPLGADFDGDCIHIFYPQSLAARAEVLELFSVEQQLLSSHTGSLNLQLANDALLSLK 180
           LICGPL ADFDGDCIH+FYPQS+AA+AEVL LFSVE+QLLSSH+G+LNLQLAND+LLSLK
Sbjct: 471 LICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLK 530

Query: 181 IMFKNFFFDKATA 219
           +MF+ +F  KA A
Sbjct: 531 MMFRKYFLGKAAA 543


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 991

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/73 (78%), Positives = 66/73 (90%)
 Frame = +1

Query: 1   LICGPLGADFDGDCIHIFYPQSLAARAEVLELFSVEQQLLSSHTGSLNLQLANDALLSLK 180
           LICGPL ADFDGDCIH+FYPQSLAA+AEVLELFSVE+QLLSSH+G+LNLQL +D+LLSLK
Sbjct: 443 LICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLTSDSLLSLK 502

Query: 181 IMFKNFFFDKATA 219
            MF  +F D+A A
Sbjct: 503 TMFNTYFLDRAAA 515


>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine
           max]
          Length = 2098

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/73 (76%), Positives = 67/73 (91%)
 Frame = +1

Query: 1   LICGPLGADFDGDCIHIFYPQSLAARAEVLELFSVEQQLLSSHTGSLNLQLANDALLSLK 180
           LICGPLGADFDGDC+H+FYPQSLAA+AEV+ELFSVE QLLSSH+G+LNLQL+ D+LLSLK
Sbjct: 445 LICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSHSGNLNLQLSTDSLLSLK 504

Query: 181 IMFKNFFFDKATA 219
           ++ K  FFD+A A
Sbjct: 505 MLVKRCFFDRAAA 517


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/73 (75%), Positives = 67/73 (91%)
 Frame = +1

Query: 1   LICGPLGADFDGDCIHIFYPQSLAARAEVLELFSVEQQLLSSHTGSLNLQLANDALLSLK 180
           LICGPL ADFDGDC+H+FYPQSL A+AEVLELFSVE+QLLSSH+G+LNLQLA D+LLSLK
Sbjct: 501 LICGPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSLK 560

Query: 181 IMFKNFFFDKATA 219
           ++F+ +F +KA A
Sbjct: 561 VLFERYFLNKAAA 573