BLASTX nr result

ID: Coptis24_contig00019060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019060
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2...    80   5e-13
ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2...    73   8e-11
ref|XP_002517992.1| conserved hypothetical protein [Ricinus comm...    70   9e-10
gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]         64   4e-08
ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264...    64   4e-08

>ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 53/118 (44%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
 Frame = +3

Query: 546 SLPGNDKCD--KKRSSVGKTCVFLPEIGCNTENQVDTSNEALTYKI-LTHNNPHSGMNVA 716
           SLP N+K D  K+R+S G       E G   + + +  +E + YK      +P +   V 
Sbjct: 326 SLPDNEKEDVNKRRASRGNGVSQRAESG-RVKKRWEIPSEVVVYKDDAEEESPQAVSVVT 384

Query: 717 DVLPKIRTIRNRYESP*DSGPAKKVAELVGKKSYFGE-EERAMETSVCQTLSFDHEED 887
           D+LP I+T+R+  E+P DSGPAK+VA+LVG+KSYF   EE A   SVCQ LSF  EED
Sbjct: 385 DMLPNIKTVRSVAETPRDSGPAKRVADLVGRKSYFPPVEETAAGDSVCQALSFAEEED 442


>ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 51/116 (43%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
 Frame = +3

Query: 546 SLPGNDKCD--KKRSSVGKTCVFLPEIGCNTENQVDTSNEALTYKILTHN-NPHSGMNVA 716
           SLP N+K D  K+R+S G       + G   + + +   E + YK      +P +   VA
Sbjct: 326 SLPDNEKEDVNKRRASRGNGACQRMDSG-RVKKKWEIPIEVVVYKGDDEGESPPTVSTVA 384

Query: 717 DVLPKIRTIRNRYESP*DSGPAKKVAELVGKKSYFGEEERAMETSVCQTLSFDHEE 884
           DVLPKIRT+R   E+P DSG AK+VA+LVGKK +F  EE     SVCQ LSF  E+
Sbjct: 385 DVLPKIRTVRCVAETPRDSGAAKRVADLVGKKPFFCIEEAEAGDSVCQALSFAGED 440


>ref|XP_002517992.1| conserved hypothetical protein [Ricinus communis]
           gi|223542974|gb|EEF44510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 443

 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 48/121 (39%), Positives = 67/121 (55%), Gaps = 7/121 (5%)
 Frame = +3

Query: 546 SLPGNDKCD--KKRSSVGKTCVFLPEIGCNTENQVDTSNEALTYK---ILTHNNPHSGMN 710
           SLP +DK D  K+R+S         E     + + +  +E + +K    +   +      
Sbjct: 321 SLPDSDKEDANKRRASRENGANQRIESSSKAKKKWEIPSELVMFKSDDAIVGESLKVKSP 380

Query: 711 VADVLPKIRTIRNRYESP*DSGPAKKVAELVGKKSYF--GEEERAMETSVCQTLSFDHEE 884
           VADVLPKI+T R+  E+P DSG AK+VA+LVGKKS+F   E E     S+CQ L FD EE
Sbjct: 381 VADVLPKIKTFRSVNETPRDSGAAKRVADLVGKKSFFSINEGEETAGDSICQALRFDFEE 440

Query: 885 D 887
           +
Sbjct: 441 E 441


>gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 458

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 48/123 (39%), Positives = 67/123 (54%), Gaps = 8/123 (6%)
 Frame = +3

Query: 546 SLPGNDK------CDKKRSSVGKTCVFLPEIGCNTENQVDTSNEALTYKI-LTHNNPHSG 704
           SLPGN K       DK+RSS   +    P+     + + D  NE +  +  +      S 
Sbjct: 340 SLPGNCKDDGSSRYDKRRSSSDLSQSKAPQ--SRVKKRWDIPNEIMILQQEMEETCLESV 397

Query: 705 MNVADVLPKIRTIRNRYESP*DSGPAKKVAELVGKK-SYFGEEERAMETSVCQTLSFDHE 881
             V D LP+IRT R    SP DSGPAK+V+EL+G K S+F +EE  ME  +CQ L+F  +
Sbjct: 398 SKVGDKLPRIRTTRCANMSPRDSGPAKRVSELIGSKTSFFADEE--MEALICQKLNFAED 455

Query: 882 EDK 890
           E++
Sbjct: 456 EEE 458


>ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera]
          Length = 466

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 15/124 (12%)
 Frame = +3

Query: 546 SLPGND----KCDKKR-SSVGKTCVFLPEIGCNTEN-QVDTSNEALTYKILTHNN----- 692
           SLP N+    +CDK+R SS+ K      E G N +  +V    E  +  ++ H +     
Sbjct: 331 SLPENEDNGKRCDKRRNSSLEKPGGIFQENGENLDKGRVKKKWEIPSEVVVVHKSLENDE 390

Query: 693 ----PHSGMNVADVLPKIRTIRNRYESP*DSGPAKKVAELVGKKSYFGEEERAMETSVCQ 860
               P S   + D+LP IRT R   ESP +SGPAK+VAEL+G+KSYF  +E   + SV  
Sbjct: 391 SPPSPRSITKMPDILPMIRTDRCINESPRNSGPAKRVAELIGRKSYFCADEDGEDHSVSL 450

Query: 861 TLSF 872
           +L F
Sbjct: 451 SLDF 454


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