BLASTX nr result
ID: Coptis24_contig00018993
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00018993
(948 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI52904.1| terpene synthase 4 [Populus trichocarpa] 270 3e-70
ref|XP_002334138.1| predicted protein [Populus trichocarpa] gi|2... 268 2e-69
ref|XP_002309850.1| predicted protein [Populus trichocarpa] gi|2... 266 7e-69
gb|AEJ91554.1| trans-ocimene synthase [Litsea cubeba] 264 2e-68
emb|CAN62153.1| hypothetical protein VITISV_032405 [Vitis vinifera] 259 7e-67
>gb|AEI52904.1| terpene synthase 4 [Populus trichocarpa]
Length = 543
Score = 270 bits (691), Expect = 3e-70
Identities = 127/213 (59%), Positives = 165/213 (77%), Gaps = 2/213 (0%)
Frame = -1
Query: 948 CYLAMFNFANMITHDIQRDQGICVLPYIVKEWISLCKSYLVEARWFYNGYTPTLEEYLGN 769
CYLA+FNF N + +D+ RD G+ VLPY+V+EW +LC SYLVEARWF + Y+PTL EYL N
Sbjct: 329 CYLALFNFVNEMAYDVMRDHGLFVLPYLVEEWANLCGSYLVEARWFSSKYSPTLSEYLEN 388
Query: 768 AWTSVGGPGAMVHAYILLGETITTESL-DCLQNGPE-LVYWASVITRINDDLGTSTAEMK 595
A TS+G P A+ HAY+LLG I SL DC ++G + L+YW+S+ITR++DDLGT TAE +
Sbjct: 389 ARTSIGSPAALAHAYMLLGSPIAQSSLMDCFKHGSDQLIYWSSLITRLSDDLGTYTAESE 448
Query: 594 RGDIPKSIQCFKNEKGVTEEEATEHIKSFRSNCWKKLNQECMKTSLPKSVVNLAVNMART 415
RGD+ KSIQC+ EKG +E+E+ EHIK + WK+LN+E K SLPK +VNL++NMART
Sbjct: 449 RGDVTKSIQCYMIEKGASEKESKEHIKGLINQAWKELNKENSKCSLPKPLVNLSLNMART 508
Query: 414 SHCIFEHGDGIGTSHGVTKDRAVSLFIEPIEIK 316
+ CIF+ GDGIGTS GVT+DR SL +EPI +K
Sbjct: 509 AQCIFQFGDGIGTSTGVTRDRLTSLIVEPIPVK 541
>ref|XP_002334138.1| predicted protein [Populus trichocarpa] gi|222869723|gb|EEF06854.1|
predicted protein [Populus trichocarpa]
Length = 482
Score = 268 bits (684), Expect = 2e-69
Identities = 125/213 (58%), Positives = 164/213 (76%), Gaps = 2/213 (0%)
Frame = -1
Query: 948 CYLAMFNFANMITHDIQRDQGICVLPYIVKEWISLCKSYLVEARWFYNGYTPTLEEYLGN 769
CYLA+FNF N + +D+ RD G+ VLPY+V+EW +LC SYLVEARWF N Y+PTL EYL N
Sbjct: 268 CYLALFNFVNEMAYDVMRDHGLFVLPYLVEEWANLCGSYLVEARWFSNKYSPTLSEYLEN 327
Query: 768 AWTSVGGPGAMVHAYILLGETITTESL-DCLQNG-PELVYWASVITRINDDLGTSTAEMK 595
A TS+G P A+ HA +LLG + SL DC ++G +L+YW+S+ITR++DDLGT TAE +
Sbjct: 328 ARTSIGSPAALAHACMLLGSPVAQSSLMDCFKHGNDQLIYWSSLITRLSDDLGTYTAESE 387
Query: 594 RGDIPKSIQCFKNEKGVTEEEATEHIKSFRSNCWKKLNQECMKTSLPKSVVNLAVNMART 415
RGD+ KSIQC+ EKG +E+E+ EHIK + WK+LN+E K SLPK +VN+++NMART
Sbjct: 388 RGDVTKSIQCYMIEKGASEKESKEHIKGLINQAWKELNKENSKCSLPKPLVNMSLNMART 447
Query: 414 SHCIFEHGDGIGTSHGVTKDRAVSLFIEPIEIK 316
+ CIF+ GDGIGTS GVT+DR SL +EPI +K
Sbjct: 448 AQCIFQFGDGIGTSTGVTRDRLTSLIVEPIPVK 480
>ref|XP_002309850.1| predicted protein [Populus trichocarpa] gi|222852753|gb|EEE90300.1|
predicted protein [Populus trichocarpa]
Length = 542
Score = 266 bits (679), Expect = 7e-69
Identities = 124/213 (58%), Positives = 163/213 (76%), Gaps = 2/213 (0%)
Frame = -1
Query: 948 CYLAMFNFANMITHDIQRDQGICVLPYIVKEWISLCKSYLVEARWFYNGYTPTLEEYLGN 769
CYLA+FNF N + +D+ RD G+ VLPY+V+EW +LC SYLVEARWF N Y+PTL EYL N
Sbjct: 328 CYLALFNFVNEMAYDVMRDHGLFVLPYLVEEWANLCGSYLVEARWFSNKYSPTLSEYLEN 387
Query: 768 AWTSVGGPGAMVHAYILLGETITTESL-DCLQNG-PELVYWASVITRINDDLGTSTAEMK 595
A TS+G P A+ HA +LLG + SL DC ++G +L+YW+S+ITR++DD GT TAE +
Sbjct: 388 ARTSIGSPAALAHACMLLGSPVAQSSLMDCFKHGNDQLIYWSSLITRLSDDXGTYTAESE 447
Query: 594 RGDIPKSIQCFKNEKGVTEEEATEHIKSFRSNCWKKLNQECMKTSLPKSVVNLAVNMART 415
RGD+ KSIQC+ EKG +E+E+ EHIK + WK+LN+E K SLPK +VN+++NMART
Sbjct: 448 RGDVTKSIQCYMIEKGASEKESKEHIKGLINQAWKELNKENSKCSLPKPLVNMSLNMART 507
Query: 414 SHCIFEHGDGIGTSHGVTKDRAVSLFIEPIEIK 316
+ CIF+ GDGIGTS GVT+DR SL +EPI +K
Sbjct: 508 AQCIFQFGDGIGTSTGVTRDRLTSLIVEPIPVK 540
>gb|AEJ91554.1| trans-ocimene synthase [Litsea cubeba]
Length = 582
Score = 264 bits (675), Expect = 2e-68
Identities = 118/208 (56%), Positives = 155/208 (74%)
Frame = -1
Query: 948 CYLAMFNFANMITHDIQRDQGICVLPYIVKEWISLCKSYLVEARWFYNGYTPTLEEYLGN 769
CYLA+FNF + +++D +D G +LP+I +EW LC SYLVEA WF NG P L+EYL N
Sbjct: 370 CYLALFNFVHEVSYDTLKDYGWNILPFIREEWERLCMSYLVEAEWFGNGNKPALDEYLRN 429
Query: 768 AWTSVGGPGAMVHAYILLGETITTESLDCLQNGPELVYWASVITRINDDLGTSTAEMKRG 589
W SVGGP AMVHAY L G I +S++ L +G EL+YW+SV TR+NDDLGTS AEMKRG
Sbjct: 430 GWISVGGPVAMVHAYFLQGRPIRKDSINFLDHGSELIYWSSVATRLNDDLGTSKAEMKRG 489
Query: 588 DIPKSIQCFKNEKGVTEEEATEHIKSFRSNCWKKLNQECMKTSLPKSVVNLAVNMARTSH 409
D+PK+++C+ + G + E+A EHI+ +CWKK+N+EC+K LPKS V +NM RT+
Sbjct: 490 DVPKAVECYMIQTGESYEDAREHIQGLVRDCWKKMNEECLKCCLPKSYVETVLNMVRTAQ 549
Query: 408 CIFEHGDGIGTSHGVTKDRAVSLFIEPI 325
CI++HGDGIGTS GVT+DR +SL EP+
Sbjct: 550 CIYQHGDGIGTSTGVTQDRVISLICEPV 577
>emb|CAN62153.1| hypothetical protein VITISV_032405 [Vitis vinifera]
Length = 619
Score = 259 bits (662), Expect = 7e-67
Identities = 116/214 (54%), Positives = 160/214 (74%)
Frame = -1
Query: 948 CYLAMFNFANMITHDIQRDQGICVLPYIVKEWISLCKSYLVEARWFYNGYTPTLEEYLGN 769
CYLAM+NFAN + +D RD + +LPY+ +W++LC SY +EA+WFYNGY P+++EYL N
Sbjct: 393 CYLAMYNFANEMAYDALRDHDLYILPYLKSQWLNLCTSYSMEAQWFYNGYKPSIDEYLSN 452
Query: 768 AWTSVGGPGAMVHAYILLGETITTESLDCLQNGPELVYWASVITRINDDLGTSTAEMKRG 589
AWTSVGGP AMVHAY L+G +CL N L+YW+S+ITR++DDLGTS+AE+ RG
Sbjct: 453 AWTSVGGPAAMVHAYFLMGCATKGNLNNCLDNASNLLYWSSLITRLSDDLGTSSAEIARG 512
Query: 588 DIPKSIQCFKNEKGVTEEEATEHIKSFRSNCWKKLNQECMKTSLPKSVVNLAVNMARTSH 409
D+ KSIQC+ E+ ++EE+A + ++ WKKLN+ +SLPKS++N ++NMAR++
Sbjct: 513 DVAKSIQCYMXEERISEEQARDQVEKLIGYSWKKLNEASXDSSLPKSMINSSLNMARSAQ 572
Query: 408 CIFEHGDGIGTSHGVTKDRAVSLFIEPIEIKFSS 307
CIF+ GDGIGTS GVTKDR S I+PI I+ S+
Sbjct: 573 CIFQFGDGIGTSIGVTKDRLTSFIIKPIXIEPST 606