BLASTX nr result
ID: Coptis24_contig00018864
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00018864
(1016 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311359.1| predicted protein [Populus trichocarpa] gi|2... 107 4e-64
ref|XP_002876207.1| ATPDR9/PDR9 [Arabidopsis lyrata subsp. lyrat... 100 2e-61
ref|XP_002512482.1| ATP-binding cassette transporter, putative [... 101 6e-61
ref|XP_002321371.1| predicted protein [Populus trichocarpa] gi|2... 100 5e-60
ref|NP_190916.1| ABC transporter G family member 37 [Arabidopsis... 102 2e-59
>ref|XP_002311359.1| predicted protein [Populus trichocarpa] gi|222851179|gb|EEE88726.1|
predicted protein [Populus trichocarpa]
Length = 1476
Score = 107 bits (267), Expect(4) = 4e-64
Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Frame = -2
Query: 640 GNTSIGMQTLTNRGLNFDASNYWISLVAIFGLSILFDIGYTLALTFIK--GTS*TIVSRE 467
GNT+IG QTL +RGLNF YWIS+ A+ GL++LF+IG+TLALTF+K G S I+S E
Sbjct: 772 GNTTIGQQTLESRGLNFHGYFYWISVGALMGLALLFNIGFTLALTFLKPPGNSRAIISYE 831
Query: 466 YLSHLVEIEDQKSTGLDDKYPTGSMITAVGERDSGRMSLPFEPLMITFQDVQYFVDTPKV 287
L +D +DK + ++ G + GRM LPFEPL++TF+DVQY+VDTP
Sbjct: 832 RYYQLQGRKDDVDGFDEDKKLHSANESSPGPK-KGRMVLPFEPLVMTFKDVQYYVDTPLE 890
Query: 286 IR 281
+R
Sbjct: 891 MR 892
Score = 97.8 bits (242), Expect(4) = 4e-64
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = -3
Query: 189 KTGGTMEGVIRIRGYPKVQKTYARISGYCEQSDIHSPNITIEESVIYSAWLCLPPEVDST 10
KTGGT EG IRI GYPKVQ T+ARISGYCEQ+DIHSP ITIEESV++SAWL LP +D
Sbjct: 938 KTGGTTEGEIRIGGYPKVQDTFARISGYCEQADIHSPQITIEESVVFSAWLRLPSVIDPK 997
Query: 9 IK 4
K
Sbjct: 998 TK 999
Score = 67.4 bits (163), Expect(4) = 4e-64
Identities = 33/83 (39%), Positives = 42/83 (50%)
Frame = -3
Query: 945 AGSTAQIAMFLFSGFIIPRRMSILGFMTFKLKNNINNLT*CSYWISIAGSSPAWLKWGFW 766
AGS A + LF GF+IP+ S PAWL+WGFW
Sbjct: 715 AGSIAIMGCLLFGGFVIPKP-----------------------------SMPAWLQWGFW 745
Query: 765 ISPLAYAEMGISANEFLAPKWNK 697
ISP+ Y E+G++ NEFLAP+W K
Sbjct: 746 ISPITYGEIGLTTNEFLAPRWEK 768
Score = 41.6 bits (96), Expect(4) = 4e-64
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = -1
Query: 278 MKEQGDGPKRLQLLRDITGAFRPGILTA 195
M+++G K+LQLL DITGAFRPGILTA
Sbjct: 891 MRKRGVLQKKLQLLSDITGAFRPGILTA 918
>ref|XP_002876207.1| ATPDR9/PDR9 [Arabidopsis lyrata subsp. lyrata]
gi|297322045|gb|EFH52466.1| ATPDR9/PDR9 [Arabidopsis
lyrata subsp. lyrata]
Length = 1450
Score = 100 bits (250), Expect(4) = 2e-61
Identities = 45/62 (72%), Positives = 54/62 (87%)
Frame = -3
Query: 189 KTGGTMEGVIRIRGYPKVQKTYARISGYCEQSDIHSPNITIEESVIYSAWLCLPPEVDST 10
KT G +EG IRI G+PK+Q+T+AR+SGYCEQ+DIHSPNIT+EESVIYSAWL L PE+DS
Sbjct: 912 KTSGYIEGDIRISGFPKIQETFARVSGYCEQTDIHSPNITVEESVIYSAWLRLAPEIDSA 971
Query: 9 IK 4
K
Sbjct: 972 TK 973
Score = 90.5 bits (223), Expect(4) = 2e-61
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Frame = -2
Query: 652 QASYGNTSIGMQTLTNRGLNFDASNYWISLVAIFGLSILFDIGYTLALTFIKG--TS*TI 479
Q N ++G L RG+++D YW+SL A+ G ++LF+I +TLALTF+K +S +
Sbjct: 744 QMQPNNVTLGRTILQTRGMDYDGYMYWVSLYALLGFTVLFNIIFTLALTFLKSPTSSRAM 803
Query: 478 VSREYLSHLVEIEDQKSTGLDDKYPTGSMITAVGERDSGRMSLPFEPLMITFQDVQYFVD 299
+S++ LS L E+ K T S V + G M LPF+PL +TFQD++YFVD
Sbjct: 804 ISQDKLSELQGTENSTDDSSVKKKTTDS---PVKTEEEGNMVLPFKPLTVTFQDLKYFVD 860
Query: 298 TPKVIR 281
P +R
Sbjct: 861 MPVEMR 866
Score = 68.9 bits (167), Expect(4) = 2e-61
Identities = 34/87 (39%), Positives = 46/87 (52%)
Frame = -3
Query: 945 AGSTAQIAMFLFSGFIIPRRMSILGFMTFKLKNNINNLT*CSYWISIAGSSPAWLKWGFW 766
AGS + F+F+GF+IP S PAWLKWGFW
Sbjct: 691 AGSFGILFTFVFAGFVIP-----------------------------PPSMPAWLKWGFW 721
Query: 765 ISPLAYAEMGISANEFLAPKWNKGKLN 685
++PL+Y E+G+S NEFLAP+WN+ + N
Sbjct: 722 VNPLSYGEIGLSVNEFLAPRWNQMQPN 748
Score = 44.7 bits (104), Expect(4) = 2e-61
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -1
Query: 278 MKEQGDGPKRLQLLRDITGAFRPGILTA 195
M++QG K+LQLL DITGAFRPGILTA
Sbjct: 865 MRDQGYDQKKLQLLSDITGAFRPGILTA 892
>ref|XP_002512482.1| ATP-binding cassette transporter, putative [Ricinus communis]
gi|223548443|gb|EEF49934.1| ATP-binding cassette
transporter, putative [Ricinus communis]
Length = 1458
Score = 101 bits (251), Expect(5) = 6e-61
Identities = 59/126 (46%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Frame = -2
Query: 637 NTSIGMQTLTNRGLNFDASNYWISLVAIFGLSILFDIGYTLALTFIK--GTS*TIVSREY 464
NT+IG QTL +RGL++D YWIS+ A+ G ++LF+IG+TLALT++K G + I+S E
Sbjct: 737 NTTIGQQTLESRGLHYDGYFYWISVGALLGFTVLFNIGFTLALTYLKPPGRTHAIISYEK 796
Query: 463 LSHLVEIED-----QKSTGLDDKYPTGSMITAVGERDSGRMSLPFEPLMITFQDVQYFVD 299
+ L E D K+ L D Y T ++GRM LPFEPL ITFQD+QY+VD
Sbjct: 797 YNQLQEKVDDNNHVDKNNRLADAYFMPDTRT-----ETGRMVLPFEPLTITFQDLQYYVD 851
Query: 298 TPKVIR 281
P +R
Sbjct: 852 APLEMR 857
Score = 94.0 bits (232), Expect(5) = 6e-61
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = -3
Query: 189 KTGGTMEGVIRIRGYPKVQKTYARISGYCEQSDIHSPNITIEESVIYSAWLCLPPEVDST 10
KTGGT++G IRI GYPKVQ +ARISGY EQ+DIHSP IT+EES+IYSAWL LP E+D
Sbjct: 903 KTGGTIKGDIRIGGYPKVQHLFARISGYVEQTDIHSPQITVEESLIYSAWLRLPSEIDPK 962
Query: 9 IKA 1
K+
Sbjct: 963 TKS 965
Score = 60.1 bits (144), Expect(5) = 6e-61
Identities = 31/82 (37%), Positives = 37/82 (45%)
Frame = -3
Query: 942 GSTAQIAMFLFSGFIIPRRMSILGFMTFKLKNNINNLT*CSYWISIAGSSPAWLKWGFWI 763
GS + LF GFIIP+ S P WL WGFWI
Sbjct: 680 GSLFILTSLLFGGFIIPKP-----------------------------SMPPWLDWGFWI 710
Query: 762 SPLAYAEMGISANEFLAPKWNK 697
+PL Y E+G+ NEFLAP+W K
Sbjct: 711 NPLTYGEIGMCVNEFLAPRWQK 732
Score = 40.8 bits (94), Expect(5) = 6e-61
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = -1
Query: 278 MKEQGDGPKRLQLLRDITGAFRPGILTA 195
M+++G K LQLL DITG FRPGILTA
Sbjct: 856 MRKRGFAQKNLQLLTDITGTFRPGILTA 883
Score = 27.7 bits (60), Expect(5) = 6e-61
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 1013 TFTSLFRFVASVSKNPVAAVSFG 945
T S+FRF+AS+ + VA+ +FG
Sbjct: 658 TSISMFRFIASICQTTVASTTFG 680
>ref|XP_002321371.1| predicted protein [Populus trichocarpa] gi|222868367|gb|EEF05498.1|
predicted protein [Populus trichocarpa]
Length = 1250
Score = 100 bits (249), Expect(4) = 5e-60
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
Frame = -2
Query: 640 GNTSIGMQTLTNRGLNFDASNYWISLVAIFGLSILFDIGYTLALTFIK--GTS*TIVSRE 467
G TSIG QTL +RGL+F YWIS+ A+ G+++L +IG+T+ALTF+K G S +SRE
Sbjct: 547 GYTSIGQQTLESRGLDFHGYFYWISVGALIGMTVLLNIGFTMALTFLKPPGNSRAFISRE 606
Query: 466 YLSHLVEIEDQKSTGLDDKYPTGSMITAVGERDSGRMSLPFEPLMITFQDVQYFVDTPKV 287
+ L + + D T + + E GRM LPFEPL +TF DVQY+VDTP
Sbjct: 607 KYNQLQGKINDRDFFDKDMTLTAAPAKSSTETKKGRMVLPFEPLTMTFTDVQYYVDTPLE 666
Query: 286 IR 281
+R
Sbjct: 667 MR 668
Score = 97.8 bits (242), Expect(4) = 5e-60
Identities = 44/62 (70%), Positives = 54/62 (87%)
Frame = -3
Query: 189 KTGGTMEGVIRIRGYPKVQKTYARISGYCEQSDIHSPNITIEESVIYSAWLCLPPEVDST 10
KTGGT+EG IRI GY KVQ ++ARISGYCEQ+DIHSP IT+EES++YSAWL LPPE+++
Sbjct: 714 KTGGTIEGEIRIGGYLKVQDSFARISGYCEQTDIHSPQITVEESLVYSAWLRLPPEINAR 773
Query: 9 IK 4
K
Sbjct: 774 TK 775
Score = 60.8 bits (146), Expect(4) = 5e-60
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -3
Query: 792 PAWLKWGFWISPLAYAEMGISANEFLAPKWNK 697
P WL WGFWISPL Y E+G++ NEFLAP+W K
Sbjct: 512 PVWLAWGFWISPLTYGEIGLTVNEFLAPRWEK 543
Score = 41.2 bits (95), Expect(4) = 5e-60
Identities = 18/28 (64%), Positives = 25/28 (89%)
Frame = -1
Query: 278 MKEQGDGPKRLQLLRDITGAFRPGILTA 195
M+++G+ K+L+LL DITGAF+PGILTA
Sbjct: 667 MRKRGNQQKKLRLLSDITGAFKPGILTA 694
>ref|NP_190916.1| ABC transporter G family member 37 [Arabidopsis thaliana]
gi|75334941|sp|Q9LFH0.1|AB37G_ARATH RecName: Full=ABC
transporter G family member 37; Short=ABC transporter
ABCG.37; Short=AtABCG37; AltName: Full=Probable
pleiotropic drug resistance protein 9
gi|6729499|emb|CAB67655.1| ABC transporter-like protein
[Arabidopsis thaliana] gi|28144337|tpg|DAA00877.1|
TPA_exp: PDR9 ABC transporter [Arabidopsis thaliana]
gi|332645574|gb|AEE79095.1| ABC transporter G family
member 37 [Arabidopsis thaliana]
Length = 1450
Score = 102 bits (253), Expect(4) = 2e-59
Identities = 46/62 (74%), Positives = 55/62 (88%)
Frame = -3
Query: 189 KTGGTMEGVIRIRGYPKVQKTYARISGYCEQSDIHSPNITIEESVIYSAWLCLPPEVDST 10
KT G +EG IRI G+PKVQ+T+AR+SGYCEQ+DIHSPNIT+EESVIYSAWL L PE+D+T
Sbjct: 912 KTSGYIEGDIRISGFPKVQETFARVSGYCEQTDIHSPNITVEESVIYSAWLRLAPEIDAT 971
Query: 9 IK 4
K
Sbjct: 972 TK 973
Score = 84.3 bits (207), Expect(4) = 2e-59
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Frame = -2
Query: 652 QASYGNTSIGMQTLTNRGLNFDASNYWISLVAIFGLSILFDIGYTLALTFIKG--TS*TI 479
Q N ++G L RG++++ YW+SL A+ G ++LF+I +TLALTF+K +S +
Sbjct: 744 QMQPNNFTLGRTILQTRGMDYNGYMYWVSLCALLGFTVLFNIIFTLALTFLKSPTSSRAM 803
Query: 478 VSREYLSHLVEIEDQKSTGLDDKYPTGSMITAVGERDSGRMSLPFEPLMITFQDVQYFVD 299
+S++ LS L E K T S V + +M LPF+PL +TFQD+ YFVD
Sbjct: 804 ISQDKLSELQGTEKSTEDSSVRKKTTDS---PVKTEEEDKMVLPFKPLTVTFQDLNYFVD 860
Query: 298 TPKVIR 281
P +R
Sbjct: 861 MPVEMR 866
Score = 67.4 bits (163), Expect(4) = 2e-59
Identities = 34/87 (39%), Positives = 45/87 (51%)
Frame = -3
Query: 945 AGSTAQIAMFLFSGFIIPRRMSILGFMTFKLKNNINNLT*CSYWISIAGSSPAWLKWGFW 766
AGS + F+F+GF+IP S PAWLKWGFW
Sbjct: 691 AGSFGILFTFVFAGFVIP-----------------------------PPSMPAWLKWGFW 721
Query: 765 ISPLAYAEMGISANEFLAPKWNKGKLN 685
+PL+Y E+G+S NEFLAP+WN+ + N
Sbjct: 722 ANPLSYGEIGLSVNEFLAPRWNQMQPN 748
Score = 44.7 bits (104), Expect(4) = 2e-59
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -1
Query: 278 MKEQGDGPKRLQLLRDITGAFRPGILTA 195
M++QG K+LQLL DITGAFRPGILTA
Sbjct: 865 MRDQGYDQKKLQLLSDITGAFRPGILTA 892