BLASTX nr result

ID: Coptis24_contig00018785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018785
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77042.1| hypothetical protein VITISV_036004 [Vitis vinifera]    85   1e-14

>emb|CAN77042.1| hypothetical protein VITISV_036004 [Vitis vinifera]
          Length = 524

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
 Frame = +1

Query: 133 MWHQKQNNEMFSSRVMGPLQYNDPHDGNSKLPAPSGVSDRDFLAESSRKRKAEAMDYAGN 312
           MWH+KQ N     +V  P +    H  N  L A SG SD +FL+ESSRKRK+EA+D    
Sbjct: 1   MWHKKQQNVGLPGQVRHPERIEGVHLENKILLAQSGSSDTNFLSESSRKRKSEALD---- 56

Query: 313 ATPGVIYQSVIENCWPNESNQPHRFGDFARMNEPGNAMRRFSNQTPSSESGVKVFQSERD 492
              G++ +SV++  +  ESN  H+ G    MN   NA   FS   P S   ++  QSE+ 
Sbjct: 57  -QQGIVSESVLKYNFFGESNLQHKAGSLFGMNVQSNASVLFS---PQSTEPIR-HQSEKR 111

Query: 493 QSQGVNSYSLNLQ---INDEK----MIDSHSSTQPQAFHQIGHSALLRPPVRMIPTLSGP 651
           Q  G N  ++  Q   +ND K     I S+S + P       HS+  + P  +I  L+G 
Sbjct: 112 QFHGQNDLAVTRQVKNVNDHKPGIEKISSYSVSVPP------HSSCQKVPSTLIEMLNGE 165

Query: 652 QSISYNIFSQIEAHMHPYRDPNDTSVEKA 738
                N  SQ  + ++      +TS EKA
Sbjct: 166 TLKVPNWQSQARSFLNSC----NTSTEKA 190


Top