BLASTX nr result

ID: Coptis24_contig00018719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018719
         (1751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543222.1| PREDICTED: uncharacterized protein LOC100809...   415   e-113
ref|XP_002272134.1| PREDICTED: uncharacterized protein LOC100243...   413   e-113
ref|XP_003634635.1| PREDICTED: uncharacterized protein LOC100264...   403   e-110
ref|NP_001042378.1| Os01g0212400 [Oryza sativa Japonica Group] g...   400   e-109
gb|ACY66874.1| P20Sh095F0 [Saccharum hybrid cultivar R570]            396   e-107

>ref|XP_003543222.1| PREDICTED: uncharacterized protein LOC100809896 [Glycine max]
          Length = 579

 Score =  415 bits (1067), Expect = e-113
 Identities = 222/524 (42%), Positives = 325/524 (62%), Gaps = 15/524 (2%)
 Frame = -2

Query: 1729 TSYVTCEPLYGVLPCAKXXXXXXXXXXXXXXXXXXXXXXVAVGSEIILSQLGPGIVGASA 1550
            T    CE  YG LPC                        ++ GSE++L  LGPGIVG   
Sbjct: 57   TGESVCEQTYGFLPCTTTVLGNLFLIIVYGFLMFKAATFLSGGSELLLEILGPGIVGGLF 116

Query: 1549 FRILGALPGATLAFASGVFGSKETAQAQVVSGVRIFVGSTVLLLSLLWGICIVAGRVDLS 1370
              ILGALP A L   SG+ GSKE AQ+QV  G+ +  GST LLL+++WG C++ G+ D+ 
Sbjct: 117  LPILGALPDAMLILVSGLSGSKEVAQSQVSVGMGLLAGSTTLLLTIIWGTCVIVGKCDIE 176

Query: 1369 VTLKLFDTKAEKSMKFLGSGLTTDLETRYFARIMTMSTIPFIIVQLSHVFGTSSGGRVAQ 1190
             ++ + D++  +     GSG++TD+ T Y ARIM +S +PF+IVQL  +  ++SG  +A 
Sbjct: 177  GSIAI-DSRDTRGFSLTGSGVSTDIWTSYAARIMVISVLPFVIVQLPQILNSTSGRHLAV 235

Query: 1189 LIALIVSLTFLCLFIFYQVFEPDIQNRGLEYVMHKFV--------QNKLLQKLVSNDGEP 1034
            LIALIVSL  L  +  YQ+F+P IQ R LE++ HK V        + + L +L+  +GEP
Sbjct: 236  LIALIVSLGLLIAYCLYQIFQPWIQRRKLEFIKHKHVILGLLTHLKKRALGRLLKENGEP 295

Query: 1033 DVPSIKKLFQTMDQNGDANISSDELKRLILGIQF--VFVMEEDFVELVLNEIDASGDGQI 860
            D   I+KLFQT+D+N D N++ +EL+ L++GIQF  + +  +D V+ ++++ D SG+ ++
Sbjct: 296  DKEVIRKLFQTIDENQDDNLTHNELRALVIGIQFEEIDLDHDDAVKRIMDDFDTSGNERV 355

Query: 859  HEKEFVEGISKWLIDSKKLKDTKFK---QRQKLCYDSSKETGTGQNLLS--NQENQNAHF 695
              +EFV G+S+WL  +++ +           K   D   ET    +LL    Q N+ A  
Sbjct: 356  DREEFVNGVSRWLQRAQRARVASGDAGPHTMKFLSDFHTETKREHDLLDVGGQVNEEAEG 415

Query: 694  VKNIFWKYLKAASLLLLGTSIIAVFSTPLIKSVVGFSSAANIPSMFISYTMVPIAVNYRR 515
            ++N  W  +KA  LLLLGT I A F+ PL+ +V  FS A +IP+ FIS+  +P+A N   
Sbjct: 416  IENAKWISIKAVLLLLLGTIIAAAFADPLVDAVDNFSEATSIPAFFISFIFLPLATNSSE 475

Query: 514  AISAITSIRQKKQKSASLTLSEIYAAVFMNNIIGMSVFLGIVYARGLDWDFSAEVLVVLI 335
            A+SAI    + K+++ASLT SE+Y AV MNN++ +SVFL +VYARGL WDFS+EVLV+L+
Sbjct: 476  AVSAIIFASRDKRQTASLTFSELYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILV 535

Query: 334  ICLGMGLFTSFCKTFPLWTCFVACLLYFFSLMLLYVLTYIYHWA 203
            +C+ +G+F SF   FPLWT  +A LLY FSL L+YVL Y++ W+
Sbjct: 536  VCIVVGVFASFRTVFPLWTAILAILLYPFSLALVYVLDYVFGWS 579


>ref|XP_002272134.1| PREDICTED: uncharacterized protein LOC100243523 [Vitis vinifera]
            gi|297740469|emb|CBI30651.3| unnamed protein product
            [Vitis vinifera]
          Length = 559

 Score =  413 bits (1062), Expect = e-113
 Identities = 224/518 (43%), Positives = 323/518 (62%), Gaps = 5/518 (0%)
 Frame = -2

Query: 1741 LNPTTSYVTCEPLYGVLPCAKXXXXXXXXXXXXXXXXXXXXXXVAVGSEIILSQLGPGIV 1562
            L  + S VTCEP YG LPC                        V+ GS++     G GI 
Sbjct: 45   LELSASTVTCEPTYGFLPCTTVVWGELFLIVVYEFLLSLGEQYVSAGSDLFFQIFGTGIF 104

Query: 1561 GASAFRILGALPGATLAFASGVFGSKETAQAQVVSGVRIFVGSTVLLLSLLWGICIVAGR 1382
            GAS F ILG++P   +   +G+ GS +TA++     + +  GS V+ L+++WG C+  G 
Sbjct: 105  GASLFHILGSIPEVAMILVTGLSGSTDTAESMATMSMAMLAGSAVMQLTVIWGSCVFFGN 164

Query: 1381 VDLS---VTLKLFDTKAEKSMKFLGSGLTTDLETRYFARIMTMSTIPFIIVQLSHVFGTS 1211
             D+S    +  L + K  K     G G+ TD  TRY ARIM +S IPF+I+QL+ +  +S
Sbjct: 165  YDISDSSTSSALENNK--KPFSLTGYGVRTDDATRYTARIMILSMIPFLILQLAKLINSS 222

Query: 1210 SGGRVAQLIALIVSLTFLCLFIFYQVFEPDIQNRGLEYVMHKFVQNKLLQKLVSNDGEPD 1031
            SG RV  LI+L+V+L FL L+ FYQVF+P IQ R L YV+  FV+N L+  L++  GEPD
Sbjct: 223  SGIRVVILISLLVTLVFLFLYCFYQVFQPWIQERRLAYVLRNFVKNNLVASLLTAAGEPD 282

Query: 1030 VPSIKKLFQTMDQNGDANISSDELKRLILGIQF--VFVMEEDFVELVLNEIDASGDGQIH 857
               I+++F  +DQN DA+IS  EL+  +LGI+     +  EDFVE V+ + DASG+ QI 
Sbjct: 283  ESRIREVFHEIDQNKDASISDAELRAFLLGIKLEEAGLRNEDFVEKVMEDFDASGNAQID 342

Query: 856  EKEFVEGISKWLIDSKKLKDTKFKQRQKLCYDSSKETGTGQNLLSNQENQNAHFVKNIFW 677
            E EF  GISKWL ++    + ++ +R KL +  S ++   Q+LL+ +  Q +   +N ++
Sbjct: 343  ETEFHRGISKWLYEANHPDNNQYDERPKL-FSRSAQSEEQQSLLAKKAKQQSQTAQNSWF 401

Query: 676  KYLKAASLLLLGTSIIAVFSTPLIKSVVGFSSAANIPSMFISYTMVPIAVNYRRAISAIT 497
             Y KAA LL++GT+++++ + PLI+++  FSSA NIPS  ISY ++P+A++YR  + AI 
Sbjct: 402  NYFKAAFLLIIGTAVMSLLAQPLIQTINEFSSAVNIPSFIISYVIIPVAMSYRETLGAIK 461

Query: 496  SIRQKKQKSASLTLSEIYAAVFMNNIIGMSVFLGIVYARGLDWDFSAEVLVVLIICLGMG 317
            S R K +++ SLT SEIY AVFMNN++G+++FL +VY R L WD SAE+LVVLIIC  MG
Sbjct: 462  SARLKTKQAISLTFSEIYNAVFMNNMMGLAMFLLLVYIRDLSWDVSAEILVVLIICTLMG 521

Query: 316  LFTSFCKTFPLWTCFVACLLYFFSLMLLYVLTYIYHWA 203
            L TS    FP+WT  +A L+Y  SL LLYVLT +  W+
Sbjct: 522  LLTSCSTKFPIWTAIIAYLMYPISLGLLYVLTEVLGWS 559


>ref|XP_003634635.1| PREDICTED: uncharacterized protein LOC100264164 [Vitis vinifera]
            gi|302142926|emb|CBI20221.3| unnamed protein product
            [Vitis vinifera]
          Length = 580

 Score =  403 bits (1036), Expect = e-110
 Identities = 227/519 (43%), Positives = 316/519 (60%), Gaps = 14/519 (2%)
 Frame = -2

Query: 1717 TCEPLYGVLPCAKXXXXXXXXXXXXXXXXXXXXXXVAVGSEIILSQLGPGIVGASAFRIL 1538
            +C+  YG +PC                        ++ GSE++L  LGPG+VG     IL
Sbjct: 63   SCDQTYGFMPCTTTTVGNLFLILVYGYLMFLAATYLSSGSELLLELLGPGLVGGLLLPIL 122

Query: 1537 GALPGATLAFASGVFGSKETAQAQVVSGVRIFVGSTVLLLSLLWGICIVAGRVDLSVTLK 1358
            GALP A L   SG+ GS ETAQ+QV  G+ +  GSTV+LL+++WG C++ G+ DL  ++ 
Sbjct: 123  GALPDAMLILVSGLSGSTETAQSQVSVGMGLLAGSTVMLLTIIWGTCVIVGKCDLQDSVA 182

Query: 1357 LFDTKAEKSMKFLGSGLTTDLETRYFARIMTMSTIPFIIVQLSHVFGTSSGGRVAQLIAL 1178
              D++  K     GSG++TD+ T Y A IM +S IPFIIVQL  V  ++S  R+A LIAL
Sbjct: 183  K-DSQDTKGFSLTGSGVSTDIWTSYAAIIMVISVIPFIIVQLPQVLHSTSARRLAVLIAL 241

Query: 1177 IVSLTFLCLFIFYQVFEPDIQNRGLEYVMHKFVQNKLLQ--------KLVSNDGEPDVPS 1022
            IVSL  L  +  YQVF P IQ R L Y  HK V + LL+        KL++ +GEP+   
Sbjct: 242  IVSLILLITYCLYQVFVPWIQKRRLAYAKHKHVISGLLKHLRKRALGKLLTEEGEPNEEI 301

Query: 1021 IKKLFQTMDQNGDANISSDELKRLILGIQF--VFVMEEDFVELVLNEIDASGDGQIHEKE 848
            I+KLF T+D+N D N+S  EL+ LI+GIQF  + + + + V+ V+++ D S D  + E E
Sbjct: 302  IRKLFHTIDENHDGNLSKAELRALIVGIQFEEIDLDKNEAVDKVMSDFDTSNDQFVDEGE 361

Query: 847  FVEGISKWLIDSKKL----KDTKFKQRQKLCYDSSKETGTGQNLLSNQENQNAHFVKNIF 680
            FV+GIS+WL+++K+      D        L             L  +Q ++    V+N  
Sbjct: 362  FVKGISRWLMEAKRYGGSGPDAGPNSSSVLDAFHRGTKREHHRLGGDQSDEVVEAVENPK 421

Query: 679  WKYLKAASLLLLGTSIIAVFSTPLIKSVVGFSSAANIPSMFISYTMVPIAVNYRRAISAI 500
            W   KA  +LLLGT I AVF+ PL+ +V  FS A +IP+ FIS+  +P+A N   A+SAI
Sbjct: 422  WITFKAVMMLLLGTLIAAVFADPLVDAVDNFSDATSIPTFFISFIALPLATNSSEAVSAI 481

Query: 499  TSIRQKKQKSASLTLSEIYAAVFMNNIIGMSVFLGIVYARGLDWDFSAEVLVVLIICLGM 320
                +KK ++ SLT SE+Y AV MNN++ +SVFL +VY RGL WDFS+EVLV++I+C+ M
Sbjct: 482  IFASRKKNRTTSLTFSELYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVIVIVCVVM 541

Query: 319  GLFTSFCKTFPLWTCFVACLLYFFSLMLLYVLTYIYHWA 203
            G+F SF  TFPLWT FVA LLY FSL L+YVL Y+  W+
Sbjct: 542  GVFASFRTTFPLWTSFVALLLYPFSLALVYVLDYVLGWS 580


>ref|NP_001042378.1| Os01g0212400 [Oryza sativa Japonica Group]
            gi|56201517|dbj|BAD73036.1| unknown protein [Oryza sativa
            Japonica Group] gi|113531909|dbj|BAF04292.1| Os01g0212400
            [Oryza sativa Japonica Group]
            gi|215694792|dbj|BAG89983.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218187733|gb|EEC70160.1|
            hypothetical protein OsI_00872 [Oryza sativa Indica
            Group] gi|222617970|gb|EEE54102.1| hypothetical protein
            OsJ_00857 [Oryza sativa Japonica Group]
          Length = 584

 Score =  400 bits (1027), Expect = e-109
 Identities = 213/514 (41%), Positives = 307/514 (59%), Gaps = 10/514 (1%)
 Frame = -2

Query: 1714 CEPLYGVLPCAKXXXXXXXXXXXXXXXXXXXXXXVAVGSEIILSQLGPGIVGASAFRILG 1535
            CE  YG LPC                        ++ GSE++L  +GPG+VG     ILG
Sbjct: 71   CEQSYGFLPCTTTVLGNLFLVLAYGFLMYKAATFLSAGSELLLEIMGPGLVGGLLLPILG 130

Query: 1534 ALPGATLAFASGVFGSKETAQAQVVSGVRIFVGSTVLLLSLLWGICIVAGRVDLSVTLKL 1355
            ALP A L   SG+ GS+ETAQ+QV+ G+ +  GSTV LL+LLWG C+V G+ D+      
Sbjct: 131  ALPDALLVLVSGLSGSRETAQSQVLIGMGLLAGSTVFLLTLLWGTCVVVGKCDIGPNGVA 190

Query: 1354 FDTKAEKSMKFLGSGLTTDLETRYFARIMTMSTIPFIIVQLSHVFGTSSGGRVAQLIALI 1175
             D +  K     G+G++TD++T Y ARIM +S IPFII Q   +  T  G R+A L+ALI
Sbjct: 191  VDLQNNKGFSLTGTGISTDVQTSYAARIMGISVIPFIIAQFPKMLKTHHGQRLAVLLALI 250

Query: 1174 VSLTFLCLFIFYQVFEPDIQNRGLEYVMHKFV--------QNKLLQKLVSNDGEPDVPSI 1019
            VS + +  +  YQVF+P IQ R L Y  HK V        Q + L +L++ DG P+   I
Sbjct: 251  VSFSLVLAYCLYQVFQPWIQKRKLAYAKHKHVISGILRHAQMEALGRLLNEDGTPNEDVI 310

Query: 1018 KKLFQTMDQNGDANISSDELKRLILGIQF--VFVMEEDFVELVLNEIDASGDGQIHEKEF 845
            KKLF  +D +    +S  EL  LI+GI F  V   + D V+ ++++ D SG+  + E EF
Sbjct: 311  KKLFHKIDMDESQTLSRAELHALIIGINFEEVDFDKNDAVDKIMDDFDTSGNDIVEEAEF 370

Query: 844  VEGISKWLIDSKKLKDTKFKQRQKLCYDSSKETGTGQNLLSNQENQNAHFVKNIFWKYLK 665
            V G+ +WL ++K+   T      K   D    T    +LL ++ ++    V+N  W   K
Sbjct: 371  VSGMKRWLNEAKRSVPTSGAYSNKFITDYHARTRQEHDLLVDRSDETVESVENPGWCITK 430

Query: 664  AASLLLLGTSIIAVFSTPLIKSVVGFSSAANIPSMFISYTMVPIAVNYRRAISAITSIRQ 485
            A  LLLLG++I A F+ PL+ +V  FS+A++IPS FIS+  +P+A N   A+SAI    +
Sbjct: 431  AVGLLLLGSAIAAAFADPLVDAVHNFSNASHIPSFFISFIALPLATNSSEAVSAIIFASR 490

Query: 484  KKQKSASLTLSEIYAAVFMNNIIGMSVFLGIVYARGLDWDFSAEVLVVLIICLGMGLFTS 305
            KK +++SLT SE+Y  V MNN + + VFL ++Y R L WDFS+EVL++L++C+ MGLFTS
Sbjct: 491  KKLRTSSLTFSEVYGGVTMNNTLCLGVFLALIYIRNLTWDFSSEVLIILLVCVIMGLFTS 550

Query: 304  FCKTFPLWTCFVACLLYFFSLMLLYVLTYIYHWA 203
            F  TFPLWTC VA +LY  SL+++Y+L +++ W+
Sbjct: 551  FRTTFPLWTCLVAYMLYPLSLVVVYILDFVFGWS 584


>gb|ACY66874.1| P20Sh095F0 [Saccharum hybrid cultivar R570]
          Length = 573

 Score =  396 bits (1017), Expect = e-107
 Identities = 216/512 (42%), Positives = 307/512 (59%), Gaps = 8/512 (1%)
 Frame = -2

Query: 1714 CEPLYGVLPCAKXXXXXXXXXXXXXXXXXXXXXXVAVGSEIILSQLGPGIVGASAFRILG 1535
            CE  YG LPC                        ++ GSE++L  +GPG+VG     ILG
Sbjct: 63   CEQSYGFLPCTTTVLGNLFLVLTYGFLMYKAATYLSTGSELLLEIMGPGLVGGLLLPILG 122

Query: 1534 ALPGATLAFASGVFGSKETAQAQVVSGVRIFVGSTVLLLSLLWGICIVAGRVDLSVTLKL 1355
            ALP A L   SG+ GSKE AQ+QV+ G+ +  GSTV LL+LLWG C+V G+ DL  T + 
Sbjct: 123  ALPDALLVLVSGLSGSKEEAQSQVLIGMGLLAGSTVFLLTLLWGTCVVVGKCDLGPTREA 182

Query: 1354 FDTKAEKSMKFLGSGLTTDLETRYFARIMTMSTIPFIIVQLSHVFGTSSGGRVAQLIALI 1175
             D    K     G+G+TTD++T Y ARIM +S IPFII Q   +  T  G R+A L+ALI
Sbjct: 183  VDLTDTKGFSLTGTGITTDVQTSYAARIMGLSVIPFIIAQFPKMLKTHHGQRLAMLLALI 242

Query: 1174 VSLTFLCLFIFYQVFEPDIQNRGLEYVMHKFVQNKLLQ------KLVSNDGEPDVPSIKK 1013
            VS   +  +  YQVF+P IQ R L Y  HK V + +L+      +L+++DG P+   I+K
Sbjct: 243  VSFLLVFSYCLYQVFQPWIQRRKLAYAKHKHVISGILKHAQALGRLLNDDGTPNEDVIRK 302

Query: 1012 LFQTMDQNGDANISSDELKRLILGIQF--VFVMEEDFVELVLNEIDASGDGQIHEKEFVE 839
            LF  +D +   ++S  EL  LI+GI F  V     D V+ V+ + D S +  + E+EFV+
Sbjct: 303  LFHKIDMDESRSLSRAELHALIVGINFNEVEFDRTDAVDKVMADFDTSRNDIVEEEEFVQ 362

Query: 838  GISKWLIDSKKLKDTKFKQRQKLCYDSSKETGTGQNLLSNQENQNAHFVKNIFWKYLKAA 659
            G+ KWL ++K+          KL  +  + T    N L ++ ++    V+N  W   KA 
Sbjct: 363  GMKKWLNEAKRHMPVGGAFSNKL-NEYHERTRQEHNELVDRSDEAVETVENPGWCITKAV 421

Query: 658  SLLLLGTSIIAVFSTPLIKSVVGFSSAANIPSMFISYTMVPIAVNYRRAISAITSIRQKK 479
            +LLLLG +I A F+ PL+ +V  FS+A +IPS FIS+  +P+A N   A+SAI    +KK
Sbjct: 422  ALLLLGAAIAAAFADPLVDAVHNFSNATHIPSFFISFIALPLATNSSEAVSAIIFASRKK 481

Query: 478  QKSASLTLSEIYAAVFMNNIIGMSVFLGIVYARGLDWDFSAEVLVVLIICLGMGLFTSFC 299
            Q++ SLT SE+Y  V MNN + + VFL ++Y R L WDFS+EVL++L++C+ M LFTSF 
Sbjct: 482  QRTCSLTFSEVYGGVTMNNTLCLGVFLALIYFRNLTWDFSSEVLIILLVCVVMALFTSFR 541

Query: 298  KTFPLWTCFVACLLYFFSLMLLYVLTYIYHWA 203
             TFPLWTC VA +LY FSL+++Y+L Y++ W+
Sbjct: 542  TTFPLWTCLVAYMLYPFSLVIVYILDYVFGWS 573


Top