BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018642
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   179   1e-42
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   160   5e-37
gb|ABK92768.1| unknown [Populus trichocarpa]                          160   5e-37
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   150   5e-34
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc...   142   1e-31

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  179 bits (453), Expect = 1e-42
 Identities = 116/332 (34%), Positives = 180/332 (54%), Gaps = 11/332 (3%)
 Frame = -2

Query: 982 ISGFFFQATMAVSRP--TPVKYVIMNSDQAVVQDKILDFLPEKVEVIASSNGLLCCHHSQ 809
           ++GFFFQ          + + Y+    +   VQ  I  FLPE V ++ S NGL+CC   +
Sbjct: 49  LAGFFFQERYQWCDEDISTISYIPATMEGTQVQQTIFSFLPEDVVILGSCNGLVCC---R 105

Query: 808 KLGVRVDNLIYVCNPANQEYVQIEWPNGSDKHQYFALAFNPFHYPMDDLSSFKLVCMSK- 632
            +    D  I+VCNP+N++++++      DK   + LAFNPF  P+D  ++FK+V +S+ 
Sbjct: 106 SVFPSPDPSIFVCNPSNKQWIRL-LETTPDKESSYGLAFNPFQSPIDMPTNFKVVRVSQA 164

Query: 631 ----EDMLSCLFQVYSSKSKEWRKLDVYKFGYDNRISWPDGQVVFASGVLHWLTNGN-VL 467
               +D     F++YSS++  W+K         N       + +F  G+LHWLT+G+ VL
Sbjct: 165 QTDMDDDSYFSFEIYSSQAGAWKKSKEICQCNHNLFK---NKGIFVGGILHWLTDGDQVL 221

Query: 466 GFDVETEQPYFISLPVERIHKNSGLCEVCIGESEGRLHLIVIPKAGLRVWILGD--GQKW 293
            F++E E  + IS P   IH  + + E+CIGES GRLH I+I + GL+VW L D     W
Sbjct: 222 SFNIENELSWLISAPFPTIHLTA-IPEMCIGESRGRLHYIMISEDGLQVWALEDYYDSNW 280

Query: 292 VVKHWVSLSRIEEEYPHFLY-TDAKITASLAPTNIVIPTWIEPVVYKDEILLIKLRHHFS 116
            + H  +L  +EEE    LY T  ++   ++  +I    W++P+ +KD +LL+++     
Sbjct: 281 SLVHSTTLEVMEEENSQLLYNTRDRVAQRISIDSI---PWMDPLAFKDGLLLMRV----- 332

Query: 115 FENEKLETGTKMYLYNFDTRKMEELFNIDKLG 20
                    TK+ LY   TRKMEEL N+ KLG
Sbjct: 333 --------STKIILYCIGTRKMEELCNLSKLG 356


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  160 bits (405), Expect = 5e-37
 Identities = 108/333 (32%), Positives = 176/333 (52%), Gaps = 8/333 (2%)
 Frame = -2

Query: 991 KAVISGFFFQATMAVSRPTPVKYVI-MNSDQAVVQDKILDFLPEKVEVIASSNGLLCCHH 815
           K  +SGFFFQ       P  +K +     ++  +Q  +  FLP+ V V+A  NGL+CC  
Sbjct: 51  KEPLSGFFFQQRHRYC-PDDIKTITYFPVERNRLQQDVFAFLPQDVVVLALCNGLVCCRS 109

Query: 814 SQKLGVRVDNLIYVCNPANQEYVQIEWPNGSDKHQYFALAFNPFHYPMDDLSSFKLV--- 644
                   D  IYVCNP N E+ +++W     K  + ALAFNPF     +L++FK+V   
Sbjct: 110 CYPFE---DPAIYVCNPLNSEWWKLDWKEPG-KESFIALAFNPFQDISVNLTNFKVVRPR 165

Query: 643 -CMSKEDMLSCLFQVYSSKSKEWRKLDVYKFGYDNRISWPDGQVVFASGVLHWLTNGN-V 470
              ++++     F++Y+S+++ W KL       DN +S  +G  +F+ G+LHWLT+G+ +
Sbjct: 166 QFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCDNSLSKNEG--IFSGGILHWLTDGDQI 222

Query: 469 LGFDVETEQPYFISLPVERIHKNSGLCEVCIGESEGRLHLIVIPKAGLRVWILGD--GQK 296
           L F+VE E    IS P+     N+     CIGESEG+L+ ++I + GL VW+L D     
Sbjct: 223 LTFNVENELALLISTPLPAGEFNTRP-HACIGESEGQLYYVLISEEGLHVWVLEDYFDST 281

Query: 295 WVVKHWVSLSRIEEEYPHFLYTDAKITASLAPTNIVIPTWIEPVVYKDEILLIKLRHHFS 116
           W +K+  +L++IE+E+   +         +    I    W++P+ +KD +L++++     
Sbjct: 282 WSLKYSKTLAQIEKEHSDIMIN--LYNRVMLWQRIDDRPWMDPLAFKDGVLVVRI----- 334

Query: 115 FENEKLETGTKMYLYNFDTRKMEELFNIDKLGS 17
                      +YLY+ DT KMEE+    K G+
Sbjct: 335 --------SNTIYLYHVDTSKMEEVGETSKFGA 359


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  160 bits (405), Expect = 5e-37
 Identities = 108/333 (32%), Positives = 176/333 (52%), Gaps = 8/333 (2%)
 Frame = -2

Query: 991 KAVISGFFFQATMAVSRPTPVKYVI-MNSDQAVVQDKILDFLPEKVEVIASSNGLLCCHH 815
           K  +SGFFFQ       P  +K +     ++  +Q  +  FLP+ V V+A  NGL+CC  
Sbjct: 51  KEPLSGFFFQQRHRYC-PDDIKTITYFPVERNRLQQDVFAFLPQDVVVLALCNGLVCCRS 109

Query: 814 SQKLGVRVDNLIYVCNPANQEYVQIEWPNGSDKHQYFALAFNPFHYPMDDLSSFKLV--- 644
                   D  IYVCNP N E+ +++W     K  + ALAFNPF     +L++FK+V   
Sbjct: 110 CYPFE---DPAIYVCNPLNSEWWKLDWKEPG-KESFIALAFNPFQDISVNLTNFKVVRPR 165

Query: 643 -CMSKEDMLSCLFQVYSSKSKEWRKLDVYKFGYDNRISWPDGQVVFASGVLHWLTNGN-V 470
              ++++     F++Y+S+++ W KL       DN +S  +G  +F+ G+LHWLT+G+ +
Sbjct: 166 QFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCDNSLSKNEG--IFSGGILHWLTDGDQI 222

Query: 469 LGFDVETEQPYFISLPVERIHKNSGLCEVCIGESEGRLHLIVIPKAGLRVWILGD--GQK 296
           L F+VE E    IS P+     N+     CIGESEG+L+ ++I + GL VW+L D     
Sbjct: 223 LTFNVENELALLISTPLPAGEFNTRP-HACIGESEGQLYYVLISEEGLHVWVLEDYFDST 281

Query: 295 WVVKHWVSLSRIEEEYPHFLYTDAKITASLAPTNIVIPTWIEPVVYKDEILLIKLRHHFS 116
           W +K+  +L++IE+E+   +         +    I    W++P+ +KD +L++++     
Sbjct: 282 WSLKYSKTLAQIEKEHSDIMIN--LYNRVMLWQRIDDRPWMDPLAFKDGVLVVRI----- 334

Query: 115 FENEKLETGTKMYLYNFDTRKMEELFNIDKLGS 17
                      +YLY+ DT KMEE+    K G+
Sbjct: 335 --------SNTIYLYHVDTSKMEEVGETSKFGA 359


>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
           gi|223535221|gb|EEF36899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 375

 Score =  150 bits (379), Expect = 5e-34
 Identities = 104/337 (30%), Positives = 171/337 (50%), Gaps = 10/337 (2%)
 Frame = -2

Query: 997 RVKAVISGFFFQATMAVSRPT--PVKYVIMNSDQAVVQDKILDFLPEKVEVIASSNGLLC 824
           R +  +SGFFFQ     S      + Y+ +  +   +  K+ DFLP+ V ++ + NGL+C
Sbjct: 50  RRREPLSGFFFQQRFQWSEYDIETINYIPVKWEGLELHKKVFDFLPQDVVLLTTCNGLVC 109

Query: 823 CHHSQKLGVRVDNLIYVCNPANQEYVQIEWPNGSDKHQYFALAFNPFHYPMDDLSSFKLV 644
           C       +     I+VCNP N+E+V+++W    DK    ALAF+P      + ++FKL 
Sbjct: 110 CRSCFPFELPA---IFVCNPLNKEWVKLDWTE-PDKEHSIALAFDPLLDISGNSANFKL- 164

Query: 643 CMSKEDMLSCLFQVYSSKSKEWRKLDVYKFGYDNRISWPDGQV-----VFASGVLHWLTN 479
               ++ L   F +YSS++  W             I W +  +     V+  GVLHWLT+
Sbjct: 165 ----DEQLYFSFDIYSSRTGSW--------NLSKDICWCNSNLHKNKGVYIRGVLHWLTD 212

Query: 478 -GNVLGFDVETEQPYFISLPVERIHKNSGLCEVCIGESEGRLHLIVIPKAGLRVWILGD- 305
              +L FDV+ E  + IS PV    + S   + CIGE EG LH ++I + G  +W L D 
Sbjct: 213 EDQILTFDVDNELAFLISAPVPAA-EFSTAPKACIGELEGCLHYVMISEEGFHIWSLEDY 271

Query: 304 -GQKWVVKHWVSLSRIEEEYPHFLYTDAKITASLAPTNIVIPTWIEPVVYKDEILLIKLR 128
               W++K+  +L+ +E+E+P FL    ++   L  T+ V P W++ + +KD IL++++ 
Sbjct: 272 FELNWLLKYSKTLAEMEQEHPKFLLNMQEL-VKLQMTDDVSP-WVDSLAFKDGILVLRV- 328

Query: 127 HHFSFENEKLETGTKMYLYNFDTRKMEELFNIDKLGS 17
                        T +YLY+    KM+E+ +  K G+
Sbjct: 329 ------------STIVYLYDIIRSKMQEVCDNSKFGT 353


>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 398

 Score =  142 bits (358), Expect = 1e-31
 Identities = 104/348 (29%), Positives = 172/348 (49%), Gaps = 19/348 (5%)
 Frame = -2

Query: 1006 QCHRVKAVISGFFFQATMAVSRPTPVK-----YVIMNSDQAVVQDKILDFLPEKVEVIAS 842
            Q  +    +SGF FQ      R  P+      Y+ +++D  V Q  +  FLPE V ++ S
Sbjct: 43   QFQKCGLALSGFMFQEKY---RKCPIDISTFTYMPIDADSKV-QKMVFGFLPEDVVILQS 98

Query: 841  SNGLLCCHHSQKL--GVRVDNLIYVCNPANQEYVQIEWPNGSDKHQYFALAFNPFHYPMD 668
             NGL+CC    +          IYVCNP  +++V  E     D     ALAF+P   P++
Sbjct: 99   CNGLVCCRSCFRTQHSTTHSTTIYVCNPLFKKWVSFEVAQ-LDSFSSIALAFDPILDPVN 157

Query: 667  DLSSFKLVCM----SKEDMLSCLFQVYSSKSKEWRKLDVYKFGYDNRISWPDGQVV---- 512
              ++FK+V +    ++++ +   F++YSS++  W++         + + + DG ++    
Sbjct: 158  TATNFKVVRIQQLENEQEEMYYTFEIYSSETGTWKE--------SSEVCYSDGNLLNNNG 209

Query: 511  -FASGVLHWLTNGN-VLGFDVETEQPYFISLPVERIHKNSGLCEVCIGESEGRLHLIVIP 338
             +A GVLHWLT+ + +L FD E E    +  P+  +         CIGES+G LH I+I 
Sbjct: 210  TYAKGVLHWLTDTDQILAFDTEKELSLLVPSPIPALEMFIDAPGTCIGESKGLLHFIMIC 269

Query: 337  KAGLRVWILGD--GQKWVVKHWVSLSRIEEEYPHFLYTDAKITASLAPTNIVIPTWIEPV 164
            + G+ VW L D    KW +KH   L  IE+E P+  +   KI          +  +++P 
Sbjct: 270  EDGIIVWCLDDYFEAKWTLKHSKQLQMIEDENPNMFFKLYKIMQRRRLPG--MEPYMDPW 327

Query: 163  VYKDEILLIKLRHHFSFENEKLETGTKMYLYNFDTRKMEELFNIDKLG 20
             +KDE+LL+++   FS           +Y Y+ +T K+ E+ N+  LG
Sbjct: 328  AFKDEVLLMRV---FS----------TVYFYHIETGKVVEVCNVASLG 362