BLASTX nr result

ID: Coptis24_contig00018625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018625
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277937.1| PREDICTED: putative axial regulator YABBY 2 ...   242   1e-61
ref|XP_002299655.1| predicted protein [Populus trichocarpa] gi|2...   225   2e-56
gb|ABK95415.1| unknown [Populus trichocarpa]                          225   2e-56
ref|XP_002515880.1| Axial regulator YABBY2, putative [Ricinus co...   221   3e-55
gb|ADL36868.1| YABBY domain class transcription factor [Malus x ...   220   4e-55

>ref|XP_002277937.1| PREDICTED: putative axial regulator YABBY 2 [Vitis vinifera]
           gi|296084019|emb|CBI24407.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  242 bits (618), Expect = 1e-61
 Identities = 124/185 (67%), Positives = 132/185 (71%)
 Frame = -1

Query: 699 MSLDVTPERVCYVHCNFCNTILAVSVPCTSLFNVVTVGCGHCANLLSVNMKALVQPNPLQ 520
           MSLD+TPERVCYVHCNFCNTILAVSVPCTSLF +VTV CGHCANLLSVNM AL+Q  P Q
Sbjct: 1   MSLDITPERVCYVHCNFCNTILAVSVPCTSLFTIVTVRCGHCANLLSVNMGALLQTVPTQ 60

Query: 519 DPQNQHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPRMLPIRPPEKRQRVPSAYNR 340
           D Q+Q                                  PRM PIRPPEKRQRVPSAYNR
Sbjct: 61  DLQSQKQQLSCGDPSEDCGSSSKCNKFSAFESAEHEQ--PRMPPIRPPEKRQRVPSAYNR 118

Query: 339 FIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMMDGNKRLKVGDALAVEGSQK 160
           FIKEEIQRIKASNPDI+HREAFSTAAKNWAHFPHIHFGL +DGNK+ K+  A A EG  K
Sbjct: 119 FIKEEIQRIKASNPDITHREAFSTAAKNWAHFPHIHFGLKLDGNKQGKLDQAFAGEGPHK 178

Query: 159 TQEFY 145
              FY
Sbjct: 179 AHGFY 183


>ref|XP_002299655.1| predicted protein [Populus trichocarpa] gi|222846913|gb|EEE84460.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  225 bits (573), Expect = 2e-56
 Identities = 119/186 (63%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
 Frame = -1

Query: 699 MSLDVTPERVCYVHCNFCNTILAVSVPCTSLFNVVTVGCGHCANLLSVNMKALVQPNPLQ 520
           MSL++  E VCYVHCN CNTILAVSVP +SLFN+VTV CGHC NLLSVNM A +Q  PLQ
Sbjct: 1   MSLELVSEPVCYVHCNLCNTILAVSVPSSSLFNIVTVRCGHCGNLLSVNMGASLQTLPLQ 60

Query: 519 DPQNQHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPRMLPIRPPEKRQRVPSAYNR 340
           DPQ+Q                                EPPRM  IRPPEKRQRVPSAYNR
Sbjct: 61  DPQSQK-LLLINSEDLNKNFGSSSKCNKVTASESTEHEPPRMPAIRPPEKRQRVPSAYNR 119

Query: 339 FIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMMDGNKRLKVG-DALAVEGSQ 163
           FIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL +D NK  K+   + A EG+Q
Sbjct: 120 FIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDSNKHAKLDHQSFAGEGTQ 179

Query: 162 KTQEFY 145
           KT   Y
Sbjct: 180 KTSGLY 185


>gb|ABK95415.1| unknown [Populus trichocarpa]
          Length = 191

 Score =  225 bits (573), Expect = 2e-56
 Identities = 119/186 (63%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
 Frame = -1

Query: 699 MSLDVTPERVCYVHCNFCNTILAVSVPCTSLFNVVTVGCGHCANLLSVNMKALVQPNPLQ 520
           MSL++  E VCYVHCN CNTILAVSVP +SLFN+VTV CGHC NLLSVNM A +Q  PLQ
Sbjct: 1   MSLELVSEPVCYVHCNLCNTILAVSVPSSSLFNIVTVRCGHCGNLLSVNMGASLQTLPLQ 60

Query: 519 DPQNQHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPRMLPIRPPEKRQRVPSAYNR 340
           DPQ+Q                                EPPRM  IRPPEKRQRVPSAYNR
Sbjct: 61  DPQSQK-LLLINSEDLNKNFGSSSKCNKVTASESTEHEPPRMPAIRPPEKRQRVPSAYNR 119

Query: 339 FIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMMDGNKRLKVG-DALAVEGSQ 163
           FIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL +D NK  K+   + A EG+Q
Sbjct: 120 FIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDSNKHAKLDHQSFAGEGTQ 179

Query: 162 KTQEFY 145
           KT   Y
Sbjct: 180 KTSGLY 185


>ref|XP_002515880.1| Axial regulator YABBY2, putative [Ricinus communis]
           gi|223545035|gb|EEF46549.1| Axial regulator YABBY2,
           putative [Ricinus communis]
          Length = 190

 Score =  221 bits (563), Expect = 3e-55
 Identities = 116/186 (62%), Positives = 127/186 (68%), Gaps = 1/186 (0%)
 Frame = -1

Query: 699 MSLDVTPERVCYVHCNFCNTILAVSVPCTSLFNVVTVGCGHCANLLSVNMKALVQPNPLQ 520
           MSL++  ERVCYVHCNFCNTILAVSVP ++L  +VTV CGH ANLLSVNM   +Q  PLQ
Sbjct: 1   MSLELVSERVCYVHCNFCNTILAVSVPSSNLLTIVTVRCGHGANLLSVNMGGSLQTFPLQ 60

Query: 519 DPQNQHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPRMLPIRPPEKRQRVPSAYNR 340
           DPQ+Q                                EPPRM PIRPPEKRQRVPSAYNR
Sbjct: 61  DPQSQK--VQLNSEDLNKDTGSSSKCNKVTSFESADNEPPRMPPIRPPEKRQRVPSAYNR 118

Query: 339 FIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMMDGNKRLKVG-DALAVEGSQ 163
           FIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL +DGNK  K+       E +Q
Sbjct: 119 FIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKHAKIDHQTFGAESTQ 178

Query: 162 KTQEFY 145
           K+   Y
Sbjct: 179 KSNGLY 184


>gb|ADL36868.1| YABBY domain class transcription factor [Malus x domestica]
          Length = 194

 Score =  220 bits (561), Expect = 4e-55
 Identities = 117/194 (60%), Positives = 129/194 (66%), Gaps = 9/194 (4%)
 Frame = -1

Query: 699 MSLDV-TPERVCYVHCNFCNTILAVSVPCTSLFNVVTVGCGHCANLLSVNMKALVQPN-- 529
           MS+D+   ERVCYVHCNFCNTILAVSVPC S  N+VTV CGHCANLLSVN+   +Q    
Sbjct: 1   MSMDLMASERVCYVHCNFCNTILAVSVPCNSSMNMVTVRCGHCANLLSVNIGGSLQSTTI 60

Query: 528 -PLQDPQNQH-----PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPRMLPIRPPEKR 367
            P QDPQ QH                                    + PR+ PIRPPEKR
Sbjct: 61  PPHQDPQKQHLSSEDSNKNCGSSSSSSSSSSKSNKFGHAFESLELHDQPRISPIRPPEKR 120

Query: 366 QRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMMDGNKRLKVGD 187
           QRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL +D N+  K+  
Sbjct: 121 QRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDANREPKLDQ 180

Query: 186 ALAVEGSQKTQEFY 145
           A A EG+QK+  FY
Sbjct: 181 AFAGEGTQKSNGFY 194


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