BLASTX nr result

ID: Coptis24_contig00018566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018566
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269013.2| PREDICTED: probable mitochondrial chaperone ...   231   8e-59
emb|CAN62143.1| hypothetical protein VITISV_023956 [Vitis vinifera]   231   8e-59
ref|XP_002534483.1| ATP binding protein, putative [Ricinus commu...   228   5e-58
ref|XP_002329630.1| predicted protein [Populus trichocarpa] gi|2...   226   2e-57
ref|XP_003549478.1| PREDICTED: probable mitochondrial chaperone ...   224   8e-57

>ref|XP_002269013.2| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Vitis
           vinifera] gi|297735391|emb|CBI17831.3| unnamed protein
           product [Vitis vinifera]
          Length = 514

 Score =  231 bits (589), Expect = 8e-59
 Identities = 117/170 (68%), Positives = 140/170 (82%), Gaps = 4/170 (2%)
 Frame = +3

Query: 3   TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSFCSFPALKILL 182
           TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMS+C+FPALKILL
Sbjct: 340 TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCTFPALKILL 399

Query: 183 GNYLGLSEGDIEKNLSSEFEEVMDKAEMTPADISEILIKNRRDKEKAVLELLNALKIKAE 362
            NYLG SE D+   +  E E V+DKA+MTPADISE+LIKNRR K+KA+ ELL AL+  AE
Sbjct: 400 QNYLGFSEPDMGLQIMEEIEAVIDKAQMTPADISEVLIKNRRHKDKALSELLEALRNMAE 459

Query: 363 KNRVV--EASRVKDSSAVEEEEQEKRALESPKEGC--ELLKNCNKGNDEE 500
           + +     ++R K+S+ VEEEEQEKRALE+PK+GC  E  ++C K  +++
Sbjct: 460 RRKKENWRSAREKNSTEVEEEEQEKRALENPKQGCDEEFEESCKKEEEDD 509


>emb|CAN62143.1| hypothetical protein VITISV_023956 [Vitis vinifera]
          Length = 501

 Score =  231 bits (589), Expect = 8e-59
 Identities = 117/170 (68%), Positives = 140/170 (82%), Gaps = 4/170 (2%)
 Frame = +3

Query: 3   TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSFCSFPALKILL 182
           TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMS+C+FPALKILL
Sbjct: 327 TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCTFPALKILL 386

Query: 183 GNYLGLSEGDIEKNLSSEFEEVMDKAEMTPADISEILIKNRRDKEKAVLELLNALKIKAE 362
            NYLG SE D+   +  E E V+DKA+MTPADISE+LIKNRR K+KA+ ELL AL+  AE
Sbjct: 387 QNYLGFSEPDMGLQIMEEIEAVIDKAQMTPADISEVLIKNRRHKDKALSELLEALRNMAE 446

Query: 363 KNRVV--EASRVKDSSAVEEEEQEKRALESPKEGC--ELLKNCNKGNDEE 500
           + +     ++R K+S+ VEEEEQEKRALE+PK+GC  E  ++C K  +++
Sbjct: 447 RRKKENWRSAREKNSTEVEEEEQEKRALENPKQGCDEEFEESCKKEEEDD 496


>ref|XP_002534483.1| ATP binding protein, putative [Ricinus communis]
           gi|223525217|gb|EEF27900.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 518

 Score =  228 bits (582), Expect = 5e-58
 Identities = 121/174 (69%), Positives = 140/174 (80%), Gaps = 8/174 (4%)
 Frame = +3

Query: 3   TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSFCSFPALKILL 182
           TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMS+CSFPALKILL
Sbjct: 340 TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSFPALKILL 399

Query: 183 GNYLGL---SEGDIEKNLSSEFEEVMDKAEMTPADISEILIKNRRD---KEKAVLELLNA 344
            NYLG     EGD+E  +  E E+V+++AEMTPAD+SE+LIK+RR+   K +A+ ELL A
Sbjct: 400 KNYLGYDHEKEGDLEDGILEELEQVINEAEMTPADVSEVLIKHRRNKXXKNRALRELLGA 459

Query: 345 LKIKAEKNRVVEASRVKD-SSAVEEEEQEKRALESPKEGCEL-LKNCNKGNDEE 500
           LK +AE+N      R K+ +  VEEEEQEKRALESPKEGCE   +NC KG D +
Sbjct: 460 LKERAERNLKNGGLREKNLNDIVEEEEQEKRALESPKEGCECEEENCKKGEDHD 513


>ref|XP_002329630.1| predicted protein [Populus trichocarpa] gi|222870511|gb|EEF07642.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  226 bits (577), Expect = 2e-57
 Identities = 117/157 (74%), Positives = 135/157 (85%), Gaps = 5/157 (3%)
 Frame = +3

Query: 3   TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSFCSFPALKILL 182
           TLSGLLNFTDGLWSCCGSERIFVFTTNHI+KLDPALLRSGRMDMH+FMS+CSFPAL+ILL
Sbjct: 318 TLSGLLNFTDGLWSCCGSERIFVFTTNHIDKLDPALLRSGRMDMHVFMSYCSFPALRILL 377

Query: 183 GNYLGLSEGDIEKNLSSEFEEVMDKAEMTPADISEILIKNRRDKEKAVLELLNALKIKAE 362
            NYLG +E D+++ +  E EEV+DKAEMTPADISE+LIKNRR+K++AV+ELL ALK KAE
Sbjct: 378 KNYLGNAESDLDEGVLKELEEVIDKAEMTPADISELLIKNRRNKDRAVIELLEALKNKAE 437

Query: 363 -KNRVVEASRVKDSSAV----EEEEQEKRALESPKEG 458
            K +  E  R K+ + V    EEEEQEKRALESPKEG
Sbjct: 438 MKLKSGECVREKNLNDVGEEEEEEEQEKRALESPKEG 474


>ref|XP_003549478.1| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Glycine
           max]
          Length = 512

 Score =  224 bits (572), Expect = 8e-57
 Identities = 118/170 (69%), Positives = 133/170 (78%), Gaps = 2/170 (1%)
 Frame = +3

Query: 3   TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSFCSFPALKILL 182
           TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMS+CSFPALKILL
Sbjct: 342 TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSFPALKILL 401

Query: 183 GNYLGLSEGDIEKNLSSEFEEVMDKAEMTPADISEILIKNRRDKEKAVLELLNALKIKAE 362
            NYLG  E ++E+ +    EEV+D A MTPADISE+LIKNRR +EKAV ELL  LK++AE
Sbjct: 402 KNYLGCEECELEEPILKRLEEVVDVARMTPADISEVLIKNRRKREKAVEELLETLKLRAE 461

Query: 363 KNRVVEASRVKDSSAVEEEEQEKRAL--ESPKEGCELLKNCNKGNDEEAK 506
            N      RV  +   EEEEQEKRAL  ESPK+  E+  NC +  +EE K
Sbjct: 462 MNEKNGVLRV-TNGVEEEEEQEKRALDSESPKQESEIEDNCKEEEEEEEK 510


Top