BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018556
         (1427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264259.1| PREDICTED: GTPase Era-like [Vitis vinifera]       531   e-148
ref|XP_002521548.1| GTP-binding protein era, putative [Ricinus c...   522   e-146
ref|XP_002310817.1| predicted protein [Populus trichocarpa] gi|2...   513   e-143
emb|CBI17485.3| unnamed protein product [Vitis vinifera]              511   e-142
gb|ABB45853.1| hypothetical protein [Eutrema halophilum]              507   e-141

>ref|XP_002264259.1| PREDICTED: GTPase Era-like [Vitis vinifera]
          Length = 435

 Score =  531 bits (1368), Expect = e-148
 Identities = 264/342 (77%), Positives = 290/342 (84%), Gaps = 2/342 (0%)
 Frame = +1

Query: 205  SFSSDESAA--FLSLNVKPDRNMALLDDYEMEELDFETNPNHKSGYVAVLGWPNVGKSTL 378
            S   +ES+A  FLSL+ KPDRNMALLDDYE+EELDF +NPNH+SGYVAVLG PNVGKSTL
Sbjct: 94   SSEDEESSASTFLSLSEKPDRNMALLDDYELEELDFASNPNHRSGYVAVLGKPNVGKSTL 153

Query: 379  SNQMIGQKLSIVTDKPQTTRHRILGICSCSEYQMILYDTPGVIEKRMHKLDSMMMKNVRN 558
            +NQMIGQKLSIVTDKPQTTRHRILGICS  EYQMILYDTPGVIEK+MHKLDSMMMKNVR+
Sbjct: 154  ANQMIGQKLSIVTDKPQTTRHRILGICSGPEYQMILYDTPGVIEKKMHKLDSMMMKNVRS 213

Query: 559  ATINADCVLIVVDACKVPQKIDDVLEEGVGSLRENVPKLLVMNKKDLIKPGEVAKRLEWY 738
            ATINADCV+++VDACK PQKID+VLEEGVG+L++ +P LLV+NKKDLIKPGE+AK+LEWY
Sbjct: 214  ATINADCVVVLVDACKEPQKIDEVLEEGVGNLKDKLPTLLVLNKKDLIKPGEIAKKLEWY 273

Query: 739  EKFTDVDEVIPVSAKYGHGVDDVKDWILSKLPLGPAYYPKDIASEHPERFFIAEIVREKI 918
            EKF DVDEVIPVSAKYG GVDDVKDWILSKLPLGPAYYPKDI SEHPERFF+ EIVREKI
Sbjct: 274  EKFIDVDEVIPVSAKYGQGVDDVKDWILSKLPLGPAYYPKDIVSEHPERFFVGEIVREKI 333

Query: 919  FMQYRNEVPYACQVNVVNYQTRPTSKDFIQVEIVAEKNTQXXXXXXXXXXXXXXXXXXXR 1098
            FMQYRNEVPYACQVNVV+Y+TRPT+KDFIQVEIV EKN+Q                   R
Sbjct: 334  FMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKEGKALKLLATAAR 393

Query: 1099 LDIEDFLQXXXXXXXXXXXXXNWRQDESLLKTYGYGGQIRAL 1224
            LDIEDFLQ             NWRQDE LLK YGYGGQI+AL
Sbjct: 394  LDIEDFLQKKVFLEVEVKVKENWRQDEGLLKYYGYGGQIQAL 435


>ref|XP_002521548.1| GTP-binding protein era, putative [Ricinus communis]
            gi|223539226|gb|EEF40819.1| GTP-binding protein era,
            putative [Ricinus communis]
          Length = 443

 Score =  522 bits (1345), Expect = e-146
 Identities = 253/336 (75%), Positives = 286/336 (85%)
 Frame = +1

Query: 217  DESAAFLSLNVKPDRNMALLDDYEMEELDFETNPNHKSGYVAVLGWPNVGKSTLSNQMIG 396
            +E    LSL+VKP+RNMALLDDYE+EELD+ ++PNH+SGYVAV+G PNVGKSTLSNQMIG
Sbjct: 108  EEETNTLSLSVKPERNMALLDDYELEELDYASDPNHRSGYVAVVGKPNVGKSTLSNQMIG 167

Query: 397  QKLSIVTDKPQTTRHRILGICSCSEYQMILYDTPGVIEKRMHKLDSMMMKNVRNATINAD 576
            QKLSIVTDKPQTTRHRILGICS  +YQM+LYDTPGVI+K+MHKLDSMMMKNVRNA INAD
Sbjct: 168  QKLSIVTDKPQTTRHRILGICSGPDYQMVLYDTPGVIQKQMHKLDSMMMKNVRNAAINAD 227

Query: 577  CVLIVVDACKVPQKIDDVLEEGVGSLRENVPKLLVMNKKDLIKPGEVAKRLEWYEKFTDV 756
            CVL++VDACKVP+KID+VLEEGVGSL++  P LLV+NKKDLIKPGE+AK+LEWYEKFTDV
Sbjct: 228  CVLVIVDACKVPEKIDEVLEEGVGSLKDKPPILLVLNKKDLIKPGEIAKKLEWYEKFTDV 287

Query: 757  DEVIPVSAKYGHGVDDVKDWILSKLPLGPAYYPKDIASEHPERFFIAEIVREKIFMQYRN 936
            DEVIPVSAKYGHGV+D+KDWILSKLP GPAYYPKDI SEHPERFF+AEIVREKIFMQ+RN
Sbjct: 288  DEVIPVSAKYGHGVEDIKDWILSKLPFGPAYYPKDIVSEHPERFFVAEIVREKIFMQFRN 347

Query: 937  EVPYACQVNVVNYQTRPTSKDFIQVEIVAEKNTQXXXXXXXXXXXXXXXXXXXRLDIEDF 1116
            EVPYACQVNVV+Y++RPT+KDFIQ+EIV EKN+Q                   RLDIEDF
Sbjct: 348  EVPYACQVNVVSYKSRPTAKDFIQMEIVVEKNSQKIIIIGKEGRALKLLATASRLDIEDF 407

Query: 1117 LQXXXXXXXXXXXXXNWRQDESLLKTYGYGGQIRAL 1224
            LQ             NWRQDE LL  YGYGG+IRAL
Sbjct: 408  LQKKVYLEIEVKVKDNWRQDEGLLNYYGYGGKIRAL 443


>ref|XP_002310817.1| predicted protein [Populus trichocarpa] gi|222853720|gb|EEE91267.1|
            predicted protein [Populus trichocarpa]
          Length = 414

 Score =  513 bits (1320), Expect = e-143
 Identities = 255/346 (73%), Positives = 285/346 (82%), Gaps = 7/346 (2%)
 Frame = +1

Query: 208  FSSDE-----SAAFLSLNVKPDRNMALLDDYEMEELDFE--TNPNHKSGYVAVLGWPNVG 366
            F SDE     S+  LSL+VKPDRN ALLDDYE+EEL F   +N NH+SGYVAV+G PNVG
Sbjct: 69   FDSDEDEDEMSSGLLSLSVKPDRNTALLDDYEIEELAFHDSSNSNHRSGYVAVVGKPNVG 128

Query: 367  KSTLSNQMIGQKLSIVTDKPQTTRHRILGICSCSEYQMILYDTPGVIEKRMHKLDSMMMK 546
            KSTLSNQMIGQKLSIVTDKPQTTRHRILGICS  +YQMILYDTPGVIEK+MHKLDSMMMK
Sbjct: 129  KSTLSNQMIGQKLSIVTDKPQTTRHRILGICSAPDYQMILYDTPGVIEKKMHKLDSMMMK 188

Query: 547  NVRNATINADCVLIVVDACKVPQKIDDVLEEGVGSLRENVPKLLVMNKKDLIKPGEVAKR 726
            NVR+A INADCVL++VDAC+ P+KID++LEEGVG+L++NVP LLV+NKKDLIKPGE+AK+
Sbjct: 189  NVRSAAINADCVLVIVDACRAPEKIDEMLEEGVGNLKDNVPTLLVLNKKDLIKPGEIAKK 248

Query: 727  LEWYEKFTDVDEVIPVSAKYGHGVDDVKDWILSKLPLGPAYYPKDIASEHPERFFIAEIV 906
            LEWYEKFT VDEVIPVSAK+G GV+D+K+WILSKLP+GPAYYPKDI SEHPERFF+AEIV
Sbjct: 249  LEWYEKFTGVDEVIPVSAKFGQGVEDIKEWILSKLPMGPAYYPKDIVSEHPERFFVAEIV 308

Query: 907  REKIFMQYRNEVPYACQVNVVNYQTRPTSKDFIQVEIVAEKNTQXXXXXXXXXXXXXXXX 1086
            REKIFMQ+RNEVPYACQVNVV Y+ RPT+KDFIQVEIV EKNTQ                
Sbjct: 309  REKIFMQFRNEVPYACQVNVVGYKARPTAKDFIQVEIVVEKNTQKIIIIGKEGKALKLLA 368

Query: 1087 XXXRLDIEDFLQXXXXXXXXXXXXXNWRQDESLLKTYGYGGQIRAL 1224
               RLDIEDFLQ             NWRQDE LLK YGYGGQI AL
Sbjct: 369  TAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKYYGYGGQISAL 414


>emb|CBI17485.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  511 bits (1317), Expect = e-142
 Identities = 251/320 (78%), Positives = 274/320 (85%)
 Frame = +1

Query: 265  MALLDDYEMEELDFETNPNHKSGYVAVLGWPNVGKSTLSNQMIGQKLSIVTDKPQTTRHR 444
            MALLDDYE+EELDF +NPNH+SGYVAVLG PNVGKSTL+NQMIGQKLSIVTDKPQTTRHR
Sbjct: 1    MALLDDYELEELDFASNPNHRSGYVAVLGKPNVGKSTLANQMIGQKLSIVTDKPQTTRHR 60

Query: 445  ILGICSCSEYQMILYDTPGVIEKRMHKLDSMMMKNVRNATINADCVLIVVDACKVPQKID 624
            ILGICS  EYQMILYDTPGVIEK+MHKLDSMMMKNVR+ATINADCV+++VDACK PQKID
Sbjct: 61   ILGICSGPEYQMILYDTPGVIEKKMHKLDSMMMKNVRSATINADCVVVLVDACKEPQKID 120

Query: 625  DVLEEGVGSLRENVPKLLVMNKKDLIKPGEVAKRLEWYEKFTDVDEVIPVSAKYGHGVDD 804
            +VLEEGVG+L++ +P LLV+NKKDLIKPGE+AK+LEWYEKF DVDEVIPVSAKYG GVDD
Sbjct: 121  EVLEEGVGNLKDKLPTLLVLNKKDLIKPGEIAKKLEWYEKFIDVDEVIPVSAKYGQGVDD 180

Query: 805  VKDWILSKLPLGPAYYPKDIASEHPERFFIAEIVREKIFMQYRNEVPYACQVNVVNYQTR 984
            VKDWILSKLPLGPAYYPKDI SEHPERFF+ EIVREKIFMQYRNEVPYACQVNVV+Y+TR
Sbjct: 181  VKDWILSKLPLGPAYYPKDIVSEHPERFFVGEIVREKIFMQYRNEVPYACQVNVVSYKTR 240

Query: 985  PTSKDFIQVEIVAEKNTQXXXXXXXXXXXXXXXXXXXRLDIEDFLQXXXXXXXXXXXXXN 1164
            PT+KDFIQVEIV EKN+Q                   RLDIEDFLQ             N
Sbjct: 241  PTAKDFIQVEIVVEKNSQKIILIGKEGKALKLLATAARLDIEDFLQKKVFLEVEVKVKEN 300

Query: 1165 WRQDESLLKTYGYGGQIRAL 1224
            WRQDE LLK YGYGGQI+AL
Sbjct: 301  WRQDEGLLKYYGYGGQIQAL 320


>gb|ABB45853.1| hypothetical protein [Eutrema halophilum]
          Length = 429

 Score =  507 bits (1305), Expect = e-141
 Identities = 248/337 (73%), Positives = 281/337 (83%)
 Frame = +1

Query: 214  SDESAAFLSLNVKPDRNMALLDDYEMEELDFETNPNHKSGYVAVLGWPNVGKSTLSNQMI 393
            SDE A+ LSL++KPDRNMALLDDYEMEEL    + NH+SGYVAVLG PNVGKSTLSNQMI
Sbjct: 94   SDE-ASLLSLSMKPDRNMALLDDYEMEELGHTPDTNHRSGYVAVLGMPNVGKSTLSNQMI 152

Query: 394  GQKLSIVTDKPQTTRHRILGICSCSEYQMILYDTPGVIEKRMHKLDSMMMKNVRNATINA 573
            GQK+SIVTDKPQTTRHRILGICS  EYQMILYDTPGVIEK+MH+LD+MMMKNVR+A INA
Sbjct: 153  GQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKKMHRLDTMMMKNVRDAAINA 212

Query: 574  DCVLIVVDACKVPQKIDDVLEEGVGSLRENVPKLLVMNKKDLIKPGEVAKRLEWYEKFTD 753
            DCV+++VDACK+P  I++VL+EG+G+L +  P LLVMNKKDLIKPGE+AK+LEWYEKFTD
Sbjct: 213  DCVVVLVDACKMPANIEEVLKEGLGNLEKRPPMLLVMNKKDLIKPGEIAKKLEWYEKFTD 272

Query: 754  VDEVIPVSAKYGHGVDDVKDWILSKLPLGPAYYPKDIASEHPERFFIAEIVREKIFMQYR 933
            VDEVIPVSAKYGHGV+DVK+WILSKLP GP YYPKDI SEHPERFF+AEIVREKIFMQYR
Sbjct: 273  VDEVIPVSAKYGHGVEDVKEWILSKLPFGPPYYPKDIVSEHPERFFVAEIVREKIFMQYR 332

Query: 934  NEVPYACQVNVVNYQTRPTSKDFIQVEIVAEKNTQXXXXXXXXXXXXXXXXXXXRLDIED 1113
            NEVPYACQVNV++Y+TRP +KDFIQVE+V +KN+Q                   RLDIED
Sbjct: 333  NEVPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGKEGKALKTLATAARLDIED 392

Query: 1114 FLQXXXXXXXXXXXXXNWRQDESLLKTYGYGGQIRAL 1224
            FLQ             NWRQDE LLK YGYGGQIRA+
Sbjct: 393  FLQKKVFLEVEVKVKENWRQDEGLLKYYGYGGQIRAM 429