BLASTX nr result

ID: Coptis24_contig00018508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018508
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302559.1| predicted protein [Populus trichocarpa] gi|2...   118   2e-24
ref|XP_002511790.1| hypothetical protein RCOM_1613720 [Ricinus c...   112   1e-22
ref|XP_002320095.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-22
ref|XP_003551655.1| PREDICTED: uncharacterized protein LOC100776...   104   4e-20
ref|XP_002270235.1| PREDICTED: uncharacterized protein LOC100242...   102   2e-19

>ref|XP_002302559.1| predicted protein [Populus trichocarpa] gi|222844285|gb|EEE81832.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  118 bits (296), Expect = 2e-24
 Identities = 81/165 (49%), Positives = 101/165 (61%), Gaps = 13/165 (7%)
 Frame = -1

Query: 931 DLITTLEHATQIAKQLPTTTRTDPTHYFQLYSSLQIANHQLSSFLNRFNS---------P 779
           DLI +LE AT +AKQLP+TT  DPTH  Q+YSSL  A+H LSSFL++ +          P
Sbjct: 1   DLILSLEQATLMAKQLPSTT--DPTHLLQIYSSLHHAHHHLSSFLSQNHQLPSFPLQPPP 58

Query: 778 PENSLSSSAIC---GDEPMQIXXXXXXXXXXENSNIIIDKVEEKMRDFFIQNKRRRKRAL 608
            ENSLSS+      GDEPMQ+           N  + I+KVEE MRD FI+NK R KR L
Sbjct: 59  QENSLSSATGADENGDEPMQV---GDDDEENSNKVVSIEKVEEGMRDCFIKNK-RPKRPL 114

Query: 607 SP-TSAIVEQRPCFGNTNNNLLVLHDGDDPRGSRLRAFDLVYQFH 476
           SP T A+ E+R  + +     +V   G DPR +RLRA DL+YQFH
Sbjct: 115 SPSTVAVAEERRLYDDGFGGGIV---GFDPRETRLRALDLIYQFH 156


>ref|XP_002511790.1| hypothetical protein RCOM_1613720 [Ricinus communis]
           gi|223548970|gb|EEF50459.1| hypothetical protein
           RCOM_1613720 [Ricinus communis]
          Length = 179

 Score =  112 bits (280), Expect = 1e-22
 Identities = 79/170 (46%), Positives = 96/170 (56%), Gaps = 15/170 (8%)
 Frame = -1

Query: 937 LRDLITTLEHATQIAKQLPTTTRTDPTHYFQLYSSLQIANHQLSSFLN--RFNSPP---- 776
           L DLI  LE AT +AKQLP  T  DP H  ++YSSL  A+H LSSF++  +F  PP    
Sbjct: 16  LPDLILALEQATLMAKQLPVPT--DPNHLLRIYSSLHQAHHHLSSFISHTQFLPPPPPSA 73

Query: 775 -ENSLSSSAICG--------DEPMQIXXXXXXXXXXENSNIIIDKVEEKMRDFFIQNKRR 623
            ENSLSS+   G        DEPMQ+          ENS   IDKVEEKMR  FI+NK R
Sbjct: 74  AENSLSSATGAGIAGAGEYGDEPMQVGDDDYEAGAEENSKATIDKVEEKMRVCFIKNK-R 132

Query: 622 RKRALSPTSAIVEQRPCFGNTNNNLLVLHDGDDPRGSRLRAFDLVYQFHG 473
            KR LSP+S   ++R          ++   G DP  +R RA DL+YQFHG
Sbjct: 133 AKRPLSPSSVAEDKRLVDDEGTARGIM---GFDPHETRSRALDLIYQFHG 179


>ref|XP_002320095.1| predicted protein [Populus trichocarpa] gi|222860868|gb|EEE98410.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  112 bits (280), Expect = 1e-22
 Identities = 81/174 (46%), Positives = 101/174 (58%), Gaps = 14/174 (8%)
 Frame = -1

Query: 952 PEIPALRDLITTLEHATQIAKQLPTTTRTDPTHYFQLYSSLQIANHQLSSFLNR-----F 788
           P    L DLI +LE A  +AKQLP+TT  DP H  Q+YSSL  A+H LSS L++     F
Sbjct: 5   PPPAPLPDLILSLEQAALMAKQLPSTT--DPNHLLQIYSSLHQAHHHLSSILSQNQLPSF 62

Query: 787 NSPP-----ENSLSSSAIC---GDEPMQIXXXXXXXXXXENSNIIIDKVEEKMRDFFIQN 632
             PP     ENSLSS+      G+EPMQ+           N  + IDKVE +MRD FI+N
Sbjct: 63  PLPPPPPPQENSLSSATGADENGNEPMQVGDDDDYEENS-NKVVSIDKVEVRMRDCFIKN 121

Query: 631 KRRRKRALSP-TSAIVEQRPCFGNTNNNLLVLHDGDDPRGSRLRAFDLVYQFHG 473
           K R KR LSP T A+ E+R    +     ++   G DP G+RLRA DL+YQFHG
Sbjct: 122 K-RPKRPLSPSTVAVAEERRLSDDGFRGGIM---GFDPHGTRLRALDLIYQFHG 171


>ref|XP_003551655.1| PREDICTED: uncharacterized protein LOC100776323 [Glycine max]
          Length = 160

 Score =  104 bits (259), Expect = 4e-20
 Identities = 68/157 (43%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
 Frame = -1

Query: 943 PALRDLITTLEHATQIAKQLPTTTRTDPTHYFQLYSSLQIANHQLSSFLNRFNSPPENSL 764
           P+++DLI +L+ AT +AKQL  ++  +PTH  Q++SSL  A+  LS FL    SPP  + 
Sbjct: 6   PSIQDLIFSLQQATFMAKQLLPSSTNNPTHLHQIHSSLHHAHRHLSVFLAALPSPPPAAE 65

Query: 763 SSSAICGDEPMQIXXXXXXXXXXENSNIIIDKVEEKMRDFFIQNKRRRKRALSPTSAIVE 584
           SS+     EPMQ+            S  IIDKVEEKMR  FI+NK R KR LSP++A   
Sbjct: 66  SSAT--DAEPMQVEDGGDGDDEETTSKCIIDKVEEKMRHCFIKNK-RPKRPLSPSAAAAA 122

Query: 583 QRPCFGNTNNNLLVLHDGD-DPRGSRLRAFDLVYQFH 476
                 + +  +  + D D DP   RLRA DLV+QFH
Sbjct: 123 AEKRVVSEDGFVGRVSDSDYDPYAVRLRALDLVHQFH 159


>ref|XP_002270235.1| PREDICTED: uncharacterized protein LOC100242127 [Vitis vinifera]
           gi|296089081|emb|CBI38784.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  102 bits (253), Expect = 2e-19
 Identities = 73/159 (45%), Positives = 87/159 (54%)
 Frame = -1

Query: 949 EIPALRDLITTLEHATQIAKQLPTTTRTDPTHYFQLYSSLQIANHQLSSFLNRFNSPPEN 770
           E   L +L+  LE AT +AKQLPTT   DPTH   +YSSL  A+ +LSSFL+  + PP  
Sbjct: 3   EAEPLTELVQALEQATLMAKQLPTTA--DPTHLHHIYSSLHHAHQRLSSFLSLPSQPPPP 60

Query: 769 SLSSSAICGDEPMQIXXXXXXXXXXENSNIIIDKVEEKMRDFFIQNKRRRKRALSPTSAI 590
                     EPMQ+            S   IDKVEE+MRD +IQNK RRKR LSP S++
Sbjct: 61  P-------PPEPMQV-GDEWEDETEVTSKDPIDKVEERMRDCYIQNK-RRKRPLSP-SSV 110

Query: 589 VEQRPCFGNTNNNLLVLHDGDDPRGSRLRAFDLVYQFHG 473
            E R               G D R SRL+A DLVYQFHG
Sbjct: 111 AEPRKYAAEV--------AGFDARESRLKALDLVYQFHG 141


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