BLASTX nr result

ID: Coptis24_contig00018496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018496
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520268.1| PREDICTED: NAC domain-containing protein 7-l...    58   2e-06
gb|AFJ91964.1| SWN4 [Brachypodium distachyon]                          57   5e-06
ref|XP_003561236.1| PREDICTED: NAC domain-containing protein 7-l...    57   5e-06
gb|AFW72540.1| putative NAC domain transcription factor superfam...    56   6e-06
ref|XP_003533516.1| PREDICTED: NAC domain-containing protein 7-l...    56   6e-06

>ref|XP_003520268.1| PREDICTED: NAC domain-containing protein 7-like [Glycine max]
          Length = 362

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 18/127 (14%)
 Frame = -1

Query: 710 GYSFCPSEGVLVDYYLRKKIMDEPIDYCLIEEVDNVYAIHPQDLAGISQVQY------FF 549
           G+ F P++  LV YYLRKK+  + ID  +I+E+D +Y I P DL  I ++ Y      +F
Sbjct: 9   GFRFHPTDEELVGYYLRKKVASQKIDLDVIKEID-LYRIEPWDLQEICRIGYEEQNEWYF 67

Query: 548 TSHPFELQSTDVK-------GRWIASVKEDIVFKDVK-VGFKQTVNYCQG----NHKSGY 405
            SH  +   T  +       G W A+ ++  V++ +K +G ++T+ + +G      K+ +
Sbjct: 68  FSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYESIKLIGMRKTLVFYKGRAPNGQKTDW 127

Query: 404 NITEYQL 384
            + EY+L
Sbjct: 128 IMHEYRL 134


>gb|AFJ91964.1| SWN4 [Brachypodium distachyon]
          Length = 336

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
 Frame = -1

Query: 710 GYSFCPSEGVLVDYYLRKKIMDEPIDYCLIEEVDNVYAIHPQDL-------AGISQVQYF 552
           G+ F P++  LVDYYLRKK+    ID  +I++VD +Y I P DL           Q  ++
Sbjct: 13  GFRFHPTDEELVDYYLRKKVASRRIDLNVIKDVD-LYKIEPWDLQEKCRIGPEEEQSDWY 71

Query: 551 FTSHPFELQSTDVK-------GRWIASVKEDIVF-KDVKVGFKQTVNYCQG----NHKSG 408
           F SH  +   T  +       G W A+ ++  ++ K   VG ++T+ Y +G     HKS 
Sbjct: 72  FFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYAKHCLVGMRKTLVYYKGRAPNGHKSD 131

Query: 407 YNITEYQL 384
           + + EY+L
Sbjct: 132 WIMHEYRL 139


>ref|XP_003561236.1| PREDICTED: NAC domain-containing protein 7-like [Brachypodium
           distachyon]
          Length = 367

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
 Frame = -1

Query: 710 GYSFCPSEGVLVDYYLRKKIMDEPIDYCLIEEVDNVYAIHPQDL-------AGISQVQYF 552
           G+ F P++  LVDYYLRKK+    ID  +I++VD +Y I P DL           Q  ++
Sbjct: 44  GFRFHPTDEELVDYYLRKKVASRRIDLNVIKDVD-LYKIEPWDLQEKCRIGPEEEQSDWY 102

Query: 551 FTSHPFELQSTDVK-------GRWIASVKEDIVF-KDVKVGFKQTVNYCQG----NHKSG 408
           F SH  +   T  +       G W A+ ++  ++ K   VG ++T+ Y +G     HKS 
Sbjct: 103 FFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYAKHCLVGMRKTLVYYKGRAPNGHKSD 162

Query: 407 YNITEYQL 384
           + + EY+L
Sbjct: 163 WIMHEYRL 170


>gb|AFW72540.1| putative NAC domain transcription factor superfamily protein [Zea
           mays]
          Length = 342

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 18/127 (14%)
 Frame = -1

Query: 710 GYSFCPSEGVLVDYYLRKKIMDEPIDYCLIEEVDNVYAIHPQDL-----AGI-SQVQYFF 549
           G+ F P++  LVDYYLRKK+    ID  +I++VD +Y I P DL      G+  Q  ++F
Sbjct: 10  GFRFHPTDEELVDYYLRKKVASNKIDLDVIKDVD-LYKIEPWDLQEKCKIGMEEQNDWYF 68

Query: 548 TSHPFELQSTDVK-------GRWIASVKEDIVF-KDVKVGFKQTVNYCQG----NHKSGY 405
            SH  +   T  +       G W A+ ++  ++ K   VG ++T+ + +G     HKS +
Sbjct: 69  FSHKDKKYPTGTRTNRATTAGFWKATGRDKPIYTKSCLVGMRKTLVFYRGRAPNGHKSDW 128

Query: 404 NITEYQL 384
            + EY+L
Sbjct: 129 IMHEYRL 135


>ref|XP_003533516.1| PREDICTED: NAC domain-containing protein 7-like [Glycine max]
          Length = 365

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 18/127 (14%)
 Frame = -1

Query: 710 GYSFCPSEGVLVDYYLRKKIMDEPIDYCLIEEVDNVYAIHPQDLAGISQV------QYFF 549
           G+ F P++  LVDYYLRKKI    ID  +I++VD +Y I P DL  I ++      +++F
Sbjct: 21  GFRFHPTDEELVDYYLRKKIASRRIDLDVIKDVD-LYKIEPWDLQEICRIGAEEQNEWYF 79

Query: 548 TSHPFELQSTDVK-------GRWIASVKEDIVF-KDVKVGFKQTVNYCQG----NHKSGY 405
            SH  +   T  +       G W A+ ++  ++ K   +G ++T+ + +G      KS +
Sbjct: 80  FSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRAPNGQKSDW 139

Query: 404 NITEYQL 384
            + EY+L
Sbjct: 140 IMHEYRL 146


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