BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018493
         (1332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    86   2e-14
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 81   5e-13
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    81   5e-13
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    81   7e-13
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    81   7e-13

>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 41/63 (65%), Positives = 48/63 (76%)
 Frame = -1

Query: 1062 TKHIEIDCHLVREKLIAGILTTRFVHNQQQLANIFTKALGREQFNYLLCKLGVTDLHTPT 883
            TKHIE DCH VR+ +  GI+TT  V   +QLA+IFTKALGR QF YL+ KLG+ DLHTPT
Sbjct: 1068 TKHIESDCHSVRDAVRDGIITTHHVRTNEQLADIFTKALGRSQFLYLMSKLGIQDLHTPT 1127

Query: 882  *GR 874
             GR
Sbjct: 1128 NGR 1130


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 37/60 (61%), Positives = 46/60 (76%)
 Frame = -1

Query: 1062 TKHIEIDCHLVREKLIAGILTTRFVHNQQQLANIFTKALGREQFNYLLCKLGVTDLHTPT 883
            TKHIE+DCH VR+++ AG +    VH  QQLA+IFTKALG++QF YLL KL + DLH PT
Sbjct: 1006 TKHIEVDCHFVRDEIAAGHIIASHVHTSQQLADIFTKALGKQQFLYLLRKLVICDLHAPT 1065


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 38/60 (63%), Positives = 47/60 (78%)
 Frame = -1

Query: 1062 TKHIEIDCHLVREKLIAGILTTRFVHNQQQLANIFTKALGREQFNYLLCKLGVTDLHTPT 883
            TKHIE DCH VR+ +  GI+TT+ V   +QLA++FTKALGR QF YL+ KLGV +LHTPT
Sbjct: 1442 TKHIESDCHSVRDAVRDGIITTQHVRTTEQLADVFTKALGRNQFLYLMSKLGVQNLHTPT 1501


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = -1

Query: 1062 TKHIEIDCHLVREKLIAGILTTRFVHNQQQLANIFTKALGREQFNYLLCKLGVTDLHTPT 883
            TKHIE DCH VR+ +  GI+TT  V   +QLA+IFTKALGR QF YL+ KLG+ +LHTPT
Sbjct: 1432 TKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGIQNLHTPT 1491


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = -1

Query: 1062 TKHIEIDCHLVREKLIAGILTTRFVHNQQQLANIFTKALGREQFNYLLCKLGVTDLHTPT 883
            TKHIE DCH VR+ +  GI+TT  V   +QLA+IFTKALGR QF YL+ KLG+ +LHTPT
Sbjct: 1354 TKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGIQNLHTPT 1413