BLASTX nr result

ID: Coptis24_contig00018486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018486
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW76587.1| hypothetical protein ZEAMMB73_378778 [Zea mays]         56   3e-06
ref|XP_002436616.1| hypothetical protein SORBIDRAFT_10g005880 [S...    56   3e-06
gb|ABK25458.1| unknown [Picea sitchensis]                              54   1e-05

>gb|AFW76587.1| hypothetical protein ZEAMMB73_378778 [Zea mays]
          Length = 617

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   HEVGRERKVFVDFFCNPERLRNQVRE 78
           HEVGRER++FVDFFCNPERL+NQVRE
Sbjct: 582 HEVGRERQIFVDFFCNPERLKNQVRE 607


>ref|XP_002436616.1| hypothetical protein SORBIDRAFT_10g005880 [Sorghum bicolor]
           gi|241914839|gb|EER87983.1| hypothetical protein
           SORBIDRAFT_10g005880 [Sorghum bicolor]
          Length = 569

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   HEVGRERKVFVDFFCNPERLRNQVRE 78
           HEVGRER++FVDFFCNPERL+NQVRE
Sbjct: 534 HEVGRERQIFVDFFCNPERLKNQVRE 559


>gb|ABK25458.1| unknown [Picea sitchensis]
          Length = 408

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   HEVGRERKVFVDFFCNPERLRNQVRE 78
           HEVGRER+VFVDFFCNP+RLR+QVRE
Sbjct: 373 HEVGRERQVFVDFFCNPDRLRSQVRE 398


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