BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018483
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17585.3| unnamed protein product [Vitis vinifera]              272   3e-71
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   272   3e-71
ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   267   1e-69
ref|XP_003611888.1| Pentatricopeptide repeat-containing protein ...   253   2e-65
ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi...   249   2e-64

>emb|CBI17585.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  272 bits (695), Expect = 3e-71
 Identities = 126/188 (67%), Positives = 158/188 (84%)
 Frame = +3

Query: 3   WTTRLVCKMLRRFKKAETAWKFFCWVAYQPGEFTHDGFTISRMITMLARYGHVELVDQLI 182
           WTTRLVCK+LR F   ETAWKFFCWVAYQPG F H+ +T+ RM+T+LAR+GHVELV++L+
Sbjct: 345 WTTRLVCKILRNFNSPETAWKFFCWVAYQPGGFNHNIYTVQRMMTLLARHGHVELVEKLL 404

Query: 183 MKVKRERIRLSFSTVRLVIDFYGLSKQPDAAMRVFYDIETVSGAISKHHQSLLYSSLLRT 362
           +K++RE IRL  ST+RL+IDFYG+S+  DAA++VF+D E++ G +SK +  LLYSSLLRT
Sbjct: 405 LKIRREEIRLPVSTIRLIIDFYGISRNADAALKVFHDAESLCGPMSKLYLMLLYSSLLRT 464

Query: 363 LVKCKRGSDVMDVLEEMILSGIIPDIQTFSGLMQYFALEGDLKTVQKLFGIVRQSGIEPD 542
           L KC R +D +DVLE+M L GI PD+ TFSGLM +FALEGD KTVQKLF +VRQSG+EPD
Sbjct: 465 LTKCGRSADALDVLEQMFLGGICPDVPTFSGLMYHFALEGDFKTVQKLFMMVRQSGVEPD 524

Query: 543 AYMFQVLI 566
           AYMF+VLI
Sbjct: 525 AYMFKVLI 532


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score =  272 bits (695), Expect = 3e-71
 Identities = 126/188 (67%), Positives = 158/188 (84%)
 Frame = +3

Query: 3   WTTRLVCKMLRRFKKAETAWKFFCWVAYQPGEFTHDGFTISRMITMLARYGHVELVDQLI 182
           WTTRLVCK+LR F   ETAWKFFCWVAYQPG F H+ +T+ RM+T+LAR+GHVELV++L+
Sbjct: 369 WTTRLVCKILRNFNSPETAWKFFCWVAYQPGGFNHNIYTVQRMMTLLARHGHVELVEKLL 428

Query: 183 MKVKRERIRLSFSTVRLVIDFYGLSKQPDAAMRVFYDIETVSGAISKHHQSLLYSSLLRT 362
           +K++RE IRL  ST+RL+IDFYG+S+  DAA++VF+D E++ G +SK +  LLYSSLLRT
Sbjct: 429 LKIRREEIRLPVSTIRLIIDFYGISRNADAALKVFHDAESLCGPMSKLYLMLLYSSLLRT 488

Query: 363 LVKCKRGSDVMDVLEEMILSGIIPDIQTFSGLMQYFALEGDLKTVQKLFGIVRQSGIEPD 542
           L KC R +D +DVLE+M L GI PD+ TFSGLM +FALEGD KTVQKLF +VRQSG+EPD
Sbjct: 489 LTKCGRSADALDVLEQMFLGGICPDVPTFSGLMYHFALEGDFKTVQKLFMMVRQSGVEPD 548

Query: 543 AYMFQVLI 566
           AYMF+VLI
Sbjct: 549 AYMFKVLI 556


>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  267 bits (682), Expect = 1e-69
 Identities = 130/188 (69%), Positives = 156/188 (82%)
 Frame = +3

Query: 3   WTTRLVCKMLRRFKKAETAWKFFCWVAYQPGEFTHDGFTISRMITMLARYGHVELVDQLI 182
           WTTRLVCK+LR F   ETAW FFCWVAYQPG FTHD +T+ RM+T+LAR+G VELVD+LI
Sbjct: 373 WTTRLVCKVLRNFSSPETAWYFFCWVAYQPG-FTHDVYTVQRMMTLLARHGKVELVDKLI 431

Query: 183 MKVKRERIRLSFSTVRLVIDFYGLSKQPDAAMRVFYDIETVSGAISKHHQSLLYSSLLRT 362
            K++ E +RL FST+RL+IDFYG+SK  DAA++VF D   + G+I+K +  LLYSSLLRT
Sbjct: 432 TKIRIEGMRLPFSTIRLIIDFYGISKNADAALKVFRDDRPLCGSITKFNLMLLYSSLLRT 491

Query: 363 LVKCKRGSDVMDVLEEMILSGIIPDIQTFSGLMQYFALEGDLKTVQKLFGIVRQSGIEPD 542
           L KC R SD +DVLEEMIL GI PDIQT+SGLM +FAL+GD+KT QKLF IVRQSG+EPD
Sbjct: 492 LTKCNRNSDAIDVLEEMILCGISPDIQTYSGLMYHFALQGDIKTAQKLFTIVRQSGVEPD 551

Query: 543 AYMFQVLI 566
           AYMF+VLI
Sbjct: 552 AYMFKVLI 559


>ref|XP_003611888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513223|gb|AES94846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 659

 Score =  253 bits (646), Expect = 2e-65
 Identities = 121/188 (64%), Positives = 157/188 (83%)
 Frame = +3

Query: 3   WTTRLVCKMLRRFKKAETAWKFFCWVAYQPGEFTHDGFTISRMITMLARYGHVELVDQLI 182
           WTTRLVCK+LR F+  +TAW FFCWVA +PG FTH+ +T+ R++T+LAR+G  ELVD+LI
Sbjct: 380 WTTRLVCKILRSFRSPDTAWNFFCWVADRPG-FTHNIYTVQRIMTLLARHGRTELVDRLI 438

Query: 183 MKVKRERIRLSFSTVRLVIDFYGLSKQPDAAMRVFYDIETVSGAISKHHQSLLYSSLLRT 362
           +K++ E +RL FST+RL+IDFYG+SK  DAA++VF D + + G+ISK +  LLYSSLLRT
Sbjct: 439 LKIRIEGMRLPFSTIRLIIDFYGISKNADAALKVFNDDQILCGSISKVNLMLLYSSLLRT 498

Query: 363 LVKCKRGSDVMDVLEEMILSGIIPDIQTFSGLMQYFALEGDLKTVQKLFGIVRQSGIEPD 542
           L KC R S+ +D+L+EMIL+GI PDIQTFSGLMQYF+  GD+KTVQKLF +VRQSG EPD
Sbjct: 499 LTKCGRNSNTLDMLDEMILNGICPDIQTFSGLMQYFSQLGDIKTVQKLFSMVRQSGFEPD 558

Query: 543 AYMFQVLI 566
           AY+++VLI
Sbjct: 559 AYLYKVLI 566


>ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Glycine max]
          Length = 658

 Score =  249 bits (637), Expect = 2e-64
 Identities = 120/189 (63%), Positives = 151/189 (79%)
 Frame = +3

Query: 3   WTTRLVCKMLRRFKKAETAWKFFCWVAYQPGEFTHDGFTISRMITMLARYGHVELVDQLI 182
           WTTRLVCKMLR FK  E AW FFCW A Q G FTHD +T+ R+ T+LAR+G  +LVD+LI
Sbjct: 383 WTTRLVCKMLRNFKTPEAAWSFFCWAANQRG-FTHDIYTVQRITTLLARHGRTDLVDRLI 441

Query: 183 MKVKRERIRLSFSTVRLVIDFYGLSKQPDAAMRVFYDIETVSGAISKHHQSLLYSSLLRT 362
            K++ ER+RL FST+R++IDFYG+SK+ DAA++VF D   + G IS  +  LLYSSLLRT
Sbjct: 442 SKIRMERMRLPFSTIRMIIDFYGISKKADAALKVFNDDRILCGPISNVNLMLLYSSLLRT 501

Query: 363 LVKCKRGSDVMDVLEEMILSGIIPDIQTFSGLMQYFALEGDLKTVQKLFGIVRQSGIEPD 542
           L KC R SD +D+L++MIL+GI PDIQTFSGLM YF+  GD+KTVQKLF +VRQSG+EPD
Sbjct: 502 LTKCGRNSDALDMLDDMILNGICPDIQTFSGLMYYFSQLGDIKTVQKLFAMVRQSGLEPD 561

Query: 543 AYMFQVLIR 569
           AY+F+ LI+
Sbjct: 562 AYLFKALIQ 570