BLASTX nr result

ID: Coptis24_contig00018469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018469
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178954.2| putative glycerol-3-phosphate transporter 5 [Ar...   325   1e-86
gb|AAD25685.1| putative membrane transporter [Arabidopsis thaliana]   325   1e-86
ref|XP_002324576.1| predicted protein [Populus trichocarpa] gi|2...   316   4e-84
ref|XP_002267328.2| PREDICTED: putative glycerol-3-phosphate tra...   315   9e-84
emb|CAN70162.1| hypothetical protein VITISV_043651 [Vitis vinifera]   313   5e-83

>ref|NP_178954.2| putative glycerol-3-phosphate transporter 5 [Arabidopsis thaliana]
           gi|317376204|sp|Q9SL56.2|GLPT5_ARATH RecName:
           Full=Putative glycerol-3-phosphate transporter 5;
           Short=G-3-P transporter 5; AltName:
           Full=Glycerol-3-phosphate permease 5; Short=AtG3Pp5;
           Short=G-3-P permease 5 gi|330251121|gb|AEC06215.1|
           putative glycerol-3-phosphate transporter 5 [Arabidopsis
           thaliana]
          Length = 493

 Score =  325 bits (832), Expect = 1e-86
 Identities = 156/236 (66%), Positives = 188/236 (79%), Gaps = 3/236 (1%)
 Frame = -2

Query: 704 PVHNLFSTTNHTQRSHLYYQITVLLLTFSAYASFHASRKPPSIVKSVLGPPETHNS---D 534
           P  +LF   N   ++  ++QI VL++TF+AYASFHASRKPPSIVKSVLGPP  ++S   +
Sbjct: 10  PAFSLFPNLNTPHKTFTFHQILVLIITFTAYASFHASRKPPSIVKSVLGPPSLNSSSIDN 69

Query: 533 GWAPFDGKQGTHRLGELDLAFLSAYSIGMYFSGNIADRIDLRLFLTFGMLGSGVFTIVFG 354
           GWAPF+G QGT RLGELDLAFLS+Y++GMYF+G++ DRIDLR FL FGM+GSG+ T+VFG
Sbjct: 70  GWAPFNGTQGTKRLGELDLAFLSSYALGMYFAGHLGDRIDLRYFLVFGMMGSGILTLVFG 129

Query: 353 LGYWLNVHKLWFFMVVQIVSGVFQSIGWPCVVSVVGNWFGKSSKRGLIMGIWNSHTSVGN 174
           LGYW+NVH L F+M VQIV G+FQSIGWPCVVSVVGNW GK  KRGLIMG+WNSHTSVGN
Sbjct: 130 LGYWMNVHTLGFYMSVQIVCGLFQSIGWPCVVSVVGNWCGK-EKRGLIMGLWNSHTSVGN 188

Query: 173 IIGSVVASSVLEFGWGWSFVLPXXXXXXXXXXXXXXXXVSPDDAGFESVGMEIELD 6
           I+GSV+ASSVL+FGWGWSFVLP                VSP+D GFE +G EIE++
Sbjct: 189 ILGSVIASSVLDFGWGWSFVLPGVLVLVSGVVVFMFLVVSPNDLGFEELGKEIEIE 244


>gb|AAD25685.1| putative membrane transporter [Arabidopsis thaliana]
          Length = 476

 Score =  325 bits (832), Expect = 1e-86
 Identities = 156/236 (66%), Positives = 188/236 (79%), Gaps = 3/236 (1%)
 Frame = -2

Query: 704 PVHNLFSTTNHTQRSHLYYQITVLLLTFSAYASFHASRKPPSIVKSVLGPPETHNS---D 534
           P  +LF   N   ++  ++QI VL++TF+AYASFHASRKPPSIVKSVLGPP  ++S   +
Sbjct: 10  PAFSLFPNLNTPHKTFTFHQILVLIITFTAYASFHASRKPPSIVKSVLGPPSLNSSSIDN 69

Query: 533 GWAPFDGKQGTHRLGELDLAFLSAYSIGMYFSGNIADRIDLRLFLTFGMLGSGVFTIVFG 354
           GWAPF+G QGT RLGELDLAFLS+Y++GMYF+G++ DRIDLR FL FGM+GSG+ T+VFG
Sbjct: 70  GWAPFNGTQGTKRLGELDLAFLSSYALGMYFAGHLGDRIDLRYFLVFGMMGSGILTLVFG 129

Query: 353 LGYWLNVHKLWFFMVVQIVSGVFQSIGWPCVVSVVGNWFGKSSKRGLIMGIWNSHTSVGN 174
           LGYW+NVH L F+M VQIV G+FQSIGWPCVVSVVGNW GK  KRGLIMG+WNSHTSVGN
Sbjct: 130 LGYWMNVHTLGFYMSVQIVCGLFQSIGWPCVVSVVGNWCGK-EKRGLIMGLWNSHTSVGN 188

Query: 173 IIGSVVASSVLEFGWGWSFVLPXXXXXXXXXXXXXXXXVSPDDAGFESVGMEIELD 6
           I+GSV+ASSVL+FGWGWSFVLP                VSP+D GFE +G EIE++
Sbjct: 189 ILGSVIASSVLDFGWGWSFVLPGVLVLVSGVVVFMFLVVSPNDLGFEELGKEIEIE 244


>ref|XP_002324576.1| predicted protein [Populus trichocarpa] gi|222866010|gb|EEF03141.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  316 bits (810), Expect = 4e-84
 Identities = 161/257 (62%), Positives = 188/257 (73%), Gaps = 14/257 (5%)
 Frame = -2

Query: 734 METKTQTAQLPVHNLFSTTNHTQRSHLYYQITVLLLTFSAYASFHASRKPPSIVKSVLGP 555
           M++KTQ    P   LF +     ++  ++Q TVL +TF AYASFHASRKPPSIVK VLGP
Sbjct: 1   MQSKTQILA-PAFTLFPSLKPPNKTLTFHQFTVLAITFLAYASFHASRKPPSIVKGVLGP 59

Query: 554 PETHNSD--------------GWAPFDGKQGTHRLGELDLAFLSAYSIGMYFSGNIADRI 417
               NS               GWAPF+G +GTHRLGELDLAFLSAYSIGMYF+G++ DRI
Sbjct: 60  KIQLNSSTIESNLTSLESNGTGWAPFNGPKGTHRLGELDLAFLSAYSIGMYFAGHVGDRI 119

Query: 416 DLRLFLTFGMLGSGVFTIVFGLGYWLNVHKLWFFMVVQIVSGVFQSIGWPCVVSVVGNWF 237
           DLRLFL FGM+GSG+ TI+FGLGYW NVH L +F+ VQI+ G+FQSIGWPCVV+VVGNWF
Sbjct: 120 DLRLFLVFGMVGSGLLTIIFGLGYWFNVHLLGYFVSVQILCGLFQSIGWPCVVAVVGNWF 179

Query: 236 GKSSKRGLIMGIWNSHTSVGNIIGSVVASSVLEFGWGWSFVLPXXXXXXXXXXXXXXXXV 57
           GK +KRGLIMGIW SHTSVGNIIGSVVAS VLEFGWGWSFV+P                V
Sbjct: 180 GK-AKRGLIMGIWTSHTSVGNIIGSVVASGVLEFGWGWSFVVPGVLVILAGVLVFLFLVV 238

Query: 56  SPDDAGFESVGMEIELD 6
           +P+D GFE+ G EIE+D
Sbjct: 239 NPEDIGFETPGKEIEMD 255


>ref|XP_002267328.2| PREDICTED: putative glycerol-3-phosphate transporter 5-like [Vitis
           vinifera]
          Length = 490

 Score =  315 bits (807), Expect = 9e-84
 Identities = 160/247 (64%), Positives = 188/247 (76%), Gaps = 4/247 (1%)
 Frame = -2

Query: 734 METKTQTAQLPVHNLFSTTNHTQRSHLYYQITVLLLTFSAYASFHASRKPPSIVKSVLGP 555
           M++ TQ A  P  NLF T     ++  +++I+ LL+TF AYASFHASRKPPSIVKSVL P
Sbjct: 1   MQSNTQ-ALAPGLNLFPTLKPPHKTLTFHRISALLITFVAYASFHASRKPPSIVKSVLSP 59

Query: 554 PETHNSD----GWAPFDGKQGTHRLGELDLAFLSAYSIGMYFSGNIADRIDLRLFLTFGM 387
               NS     GWAPF+G  GTHRLGELDLAFLS+YSIGMYFSG+  DR+DLRLFL  GM
Sbjct: 60  EIQSNSTSVDTGWAPFNGPHGTHRLGELDLAFLSSYSIGMYFSGHAGDRLDLRLFLVIGM 119

Query: 386 LGSGVFTIVFGLGYWLNVHKLWFFMVVQIVSGVFQSIGWPCVVSVVGNWFGKSSKRGLIM 207
           LGSG+ TI+FGLG WLNVHKL FF+ VQIV G+FQSIGWPCVV+V+GNWFGK  KRGLIM
Sbjct: 120 LGSGILTIIFGLGDWLNVHKLGFFVGVQIVCGLFQSIGWPCVVAVLGNWFGK-EKRGLIM 178

Query: 206 GIWNSHTSVGNIIGSVVASSVLEFGWGWSFVLPXXXXXXXXXXXXXXXXVSPDDAGFESV 27
           G+WNSHTSVGNI+GSVV+S+VLEFGWGWSFVLP                V+P+D GFE +
Sbjct: 179 GLWNSHTSVGNIVGSVVSSAVLEFGWGWSFVLPGILIIIIGIFVFMFLVVNPEDLGFELL 238

Query: 26  GMEIELD 6
             EIE++
Sbjct: 239 AKEIEMN 245


>emb|CAN70162.1| hypothetical protein VITISV_043651 [Vitis vinifera]
          Length = 488

 Score =  313 bits (801), Expect = 5e-83
 Identities = 159/247 (64%), Positives = 187/247 (75%), Gaps = 4/247 (1%)
 Frame = -2

Query: 734 METKTQTAQLPVHNLFSTTNHTQRSHLYYQITVLLLTFSAYASFHASRKPPSIVKSVLGP 555
           M++ TQ A  P  NLF T     ++  +++I+ LL+TF AYASFHASR PPSIVKSVL P
Sbjct: 1   MQSNTQ-ALAPGLNLFPTLKPPHKTLTFHRISALLITFIAYASFHASRXPPSIVKSVLSP 59

Query: 554 PETHNSD----GWAPFDGKQGTHRLGELDLAFLSAYSIGMYFSGNIADRIDLRLFLTFGM 387
               NS     GWAPF+G  GTHRLGELDLAFLS+YSIGMYFSG+  DR+DLRLFL  GM
Sbjct: 60  EIQSNSTSVDTGWAPFNGPHGTHRLGELDLAFLSSYSIGMYFSGHAGDRLDLRLFLVIGM 119

Query: 386 LGSGVFTIVFGLGYWLNVHKLWFFMVVQIVSGVFQSIGWPCVVSVVGNWFGKSSKRGLIM 207
           LGSG+ TI+FGLG WLNVHKL FF+ VQIV G+FQSIGWPCVV+V+GNWFGK  KRGLIM
Sbjct: 120 LGSGILTIIFGLGDWLNVHKLGFFVGVQIVCGLFQSIGWPCVVAVLGNWFGK-EKRGLIM 178

Query: 206 GIWNSHTSVGNIIGSVVASSVLEFGWGWSFVLPXXXXXXXXXXXXXXXXVSPDDAGFESV 27
           G+WNSHTSVGNI+GSVV+S+VLEFGWGWSFVLP                V+P+D GFE +
Sbjct: 179 GLWNSHTSVGNIVGSVVSSAVLEFGWGWSFVLPGILIIIIGIFVFMFLVVNPEDLGFELL 238

Query: 26  GMEIELD 6
             EIE++
Sbjct: 239 AKEIEMN 245


Top