BLASTX nr result

ID: Coptis24_contig00018461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018461
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|2...   280   2e-73
ref|XP_003536205.1| PREDICTED: U-box domain-containing protein 4...   275   7e-72
ref|XP_002527304.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   274   1e-71
ref|XP_002283969.2| PREDICTED: U-box domain-containing protein 4...   272   6e-71
emb|CBI26345.3| unnamed protein product [Vitis vinifera]              272   6e-71

>ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|222863699|gb|EEF00830.1|
           predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  280 bits (716), Expect = 2e-73
 Identities = 146/204 (71%), Positives = 175/204 (85%)
 Frame = -3

Query: 614 GTFLTVVTNQVIKTAQAANDVLVEKESFKILSKHLSDIELVLKKLQHCELNDFQAARNAL 435
           GT L V+T+QV+KTAQAA DVL+EKESFK+L+KHL DIE VLK+LQ  +L+D +AAR AL
Sbjct: 25  GTILAVLTSQVLKTAQAAKDVLIEKESFKVLAKHLFDIESVLKELQLQKLDDSRAARQAL 84

Query: 434 EFLKKDVMKANDLVEKYKNRARFYLLLMCRHIVNEVQDVTRDIGKSLALLSLASPDVLTD 255
           E L+ DV KAN+LVEKYKNRARFYLL+ CRHIVNEVQ+VTRDIG+SLA LSLA+ +VL  
Sbjct: 85  ETLEADVKKANNLVEKYKNRARFYLLVKCRHIVNEVQEVTRDIGRSLAALSLANTEVLAG 144

Query: 254 ISEQVNRLHNEMQGAKFEASQTQLQIVQKLDLGIKEGKVDQGFENDILEEIARAVGVPIE 75
           IS+Q+NRL +EM+ A+FEAS +QLQIV KL+ G+++ K+DQGF NDILEEIARAVGVP+E
Sbjct: 145 ISDQMNRLQDEMRRAEFEASHSQLQIVDKLNQGLRDQKLDQGFANDILEEIARAVGVPVE 204

Query: 74  PSEISKELASLRHEKEEAAAHKHR 3
           PSEISKELAS R EKEEAA  K R
Sbjct: 205 PSEISKELASFRREKEEAANRKER 228


>ref|XP_003536205.1| PREDICTED: U-box domain-containing protein 44-like [Glycine max]
          Length = 1014

 Score =  275 bits (703), Expect = 7e-72
 Identities = 147/207 (71%), Positives = 171/207 (82%)
 Frame = -3

Query: 623 IPIGTFLTVVTNQVIKTAQAANDVLVEKESFKILSKHLSDIELVLKKLQHCELNDFQAAR 444
           IPIGT LTVVTNQV+KTA AA+DVL+ KESFK LS HL DIE VLK+LQ  ELND QAAR
Sbjct: 8   IPIGTILTVVTNQVLKTAHAASDVLIGKESFKALSTHLFDIEPVLKELQLQELNDSQAAR 67

Query: 443 NALEFLKKDVMKANDLVEKYKNRARFYLLLMCRHIVNEVQDVTRDIGKSLALLSLASPDV 264
            ALE L+ DV KAN+LV+KY+NR RFYLL+ CR IV EV+ VTRDIGKSLA LS+A+ +V
Sbjct: 68  VALESLEADVKKANNLVDKYRNRGRFYLLIKCRSIVEEVEQVTRDIGKSLAALSIANTEV 127

Query: 263 LTDISEQVNRLHNEMQGAKFEASQTQLQIVQKLDLGIKEGKVDQGFENDILEEIARAVGV 84
           L+ IS+QVNRL NEMQ  KFEASQ+Q+QIV KL+  +KE K DQ F ND+L+EIARAVGV
Sbjct: 128 LSRISDQVNRLQNEMQREKFEASQSQIQIVDKLNQALKEQKHDQAFANDMLKEIARAVGV 187

Query: 83  PIEPSEISKELASLRHEKEEAAAHKHR 3
           P+EPSEISKELAS+R EKEEA+  K R
Sbjct: 188 PVEPSEISKELASIRKEKEEASIRKER 214


>ref|XP_002527304.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223533304|gb|EEF35056.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 1017

 Score =  274 bits (701), Expect = 1e-71
 Identities = 146/207 (70%), Positives = 170/207 (82%)
 Frame = -3

Query: 623 IPIGTFLTVVTNQVIKTAQAANDVLVEKESFKILSKHLSDIELVLKKLQHCELNDFQAAR 444
           IPIGT L V+TNQV+KTAQAA DV++E +SFK+LSKHL DIE VLK+LQ  +LND QAAR
Sbjct: 6   IPIGTILAVLTNQVLKTAQAAKDVVIETKSFKVLSKHLFDIEPVLKELQLQKLNDSQAAR 65

Query: 443 NALEFLKKDVMKANDLVEKYKNRARFYLLLMCRHIVNEVQDVTRDIGKSLALLSLASPDV 264
            AL+ L+ DV KAN+LVEKYK R RFYLLL CRHIVNEVQ+VTRDIG+SLA LS A+ +V
Sbjct: 66  LALQILEADVKKANNLVEKYKCRGRFYLLLKCRHIVNEVQEVTRDIGRSLAALSFANTEV 125

Query: 263 LTDISEQVNRLHNEMQGAKFEASQTQLQIVQKLDLGIKEGKVDQGFENDILEEIARAVGV 84
           L+ IS+QVNRLHNEMQ  + EAS +QLQIV KL+ G+   K+DQGF ND+LEEIA AVGV
Sbjct: 126 LSGISDQVNRLHNEMQRVELEASHSQLQIVDKLNQGLHAQKLDQGFANDMLEEIALAVGV 185

Query: 83  PIEPSEISKELASLRHEKEEAAAHKHR 3
            +EPSEISKELAS R EKEEAA  K R
Sbjct: 186 RVEPSEISKELASFRKEKEEAADRKER 212


>ref|XP_002283969.2| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 1016

 Score =  272 bits (695), Expect = 6e-71
 Identities = 142/207 (68%), Positives = 170/207 (82%)
 Frame = -3

Query: 623 IPIGTFLTVVTNQVIKTAQAANDVLVEKESFKILSKHLSDIELVLKKLQHCELNDFQAAR 444
           +PIGT L V+TNQV+KTAQAA DVL+ KE FK+LSKHL DIE VLK+LQ  +LND QAA+
Sbjct: 6   VPIGTILAVLTNQVLKTAQAAKDVLIGKECFKVLSKHLFDIEPVLKELQLQKLNDSQAAK 65

Query: 443 NALEFLKKDVMKANDLVEKYKNRARFYLLLMCRHIVNEVQDVTRDIGKSLALLSLASPDV 264
            ALE L++DV KAN+LVE+YKN ARFYLL  CRHIV EV++VTRDIG+SLA LSLA+ +V
Sbjct: 66  QALENLEEDVKKANNLVERYKNCARFYLLFKCRHIVKEVEEVTRDIGRSLAALSLANTEV 125

Query: 263 LTDISEQVNRLHNEMQGAKFEASQTQLQIVQKLDLGIKEGKVDQGFENDILEEIARAVGV 84
           L  IS+QVNRL NEMQ  +FEASQ+Q++IV KL+ GI + K+DQ F ND+LEEIA AVGV
Sbjct: 126 LAGISDQVNRLQNEMQRVEFEASQSQIKIVDKLNQGINDAKLDQDFANDMLEEIAMAVGV 185

Query: 83  PIEPSEISKELASLRHEKEEAAAHKHR 3
           P+EPSEISKEL +LR EKEE A  K R
Sbjct: 186 PVEPSEISKELKNLRKEKEETANRKER 212


>emb|CBI26345.3| unnamed protein product [Vitis vinifera]
          Length = 1013

 Score =  272 bits (695), Expect = 6e-71
 Identities = 142/207 (68%), Positives = 170/207 (82%)
 Frame = -3

Query: 623 IPIGTFLTVVTNQVIKTAQAANDVLVEKESFKILSKHLSDIELVLKKLQHCELNDFQAAR 444
           +PIGT L V+TNQV+KTAQAA DVL+ KE FK+LSKHL DIE VLK+LQ  +LND QAA+
Sbjct: 6   VPIGTILAVLTNQVLKTAQAAKDVLIGKECFKVLSKHLFDIEPVLKELQLQKLNDSQAAK 65

Query: 443 NALEFLKKDVMKANDLVEKYKNRARFYLLLMCRHIVNEVQDVTRDIGKSLALLSLASPDV 264
            ALE L++DV KAN+LVE+YKN ARFYLL  CRHIV EV++VTRDIG+SLA LSLA+ +V
Sbjct: 66  QALENLEEDVKKANNLVERYKNCARFYLLFKCRHIVKEVEEVTRDIGRSLAALSLANTEV 125

Query: 263 LTDISEQVNRLHNEMQGAKFEASQTQLQIVQKLDLGIKEGKVDQGFENDILEEIARAVGV 84
           L  IS+QVNRL NEMQ  +FEASQ+Q++IV KL+ GI + K+DQ F ND+LEEIA AVGV
Sbjct: 126 LAGISDQVNRLQNEMQRVEFEASQSQIKIVDKLNQGINDAKLDQDFANDMLEEIAMAVGV 185

Query: 83  PIEPSEISKELASLRHEKEEAAAHKHR 3
           P+EPSEISKEL +LR EKEE A  K R
Sbjct: 186 PVEPSEISKELKNLRKEKEETANRKER 212


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