BLASTX nr result

ID: Coptis24_contig00018458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018458
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Rici...   179   2e-43
ref|XP_002312072.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_002315242.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_004147698.1| PREDICTED: 2-oxoglutarate dehydrogenase, mit...   174   5e-42
ref|XP_002876300.1| hypothetical protein ARALYDRAFT_485968 [Arab...   171   4e-41

>ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis]
           gi|223532141|gb|EEF33948.1| 2-oxoglutarate
           dehydrogenase, putative [Ricinus communis]
          Length = 1021

 Score =  179 bits (455), Expect = 2e-43
 Identities = 86/93 (92%), Positives = 92/93 (98%)
 Frame = +3

Query: 3   GFKSPEQVSRIRNTGVKPEILKNVGKATTTLPDNFKPHRAVKKIYEQRSQMIETGKGIDW 182
           GFKSPEQ+SRIRNTGV+PEILKNVGKA TT+PDNFKPHRAVKK+YEQR+QMIETG+GIDW
Sbjct: 579 GFKSPEQLSRIRNTGVQPEILKNVGKAITTIPDNFKPHRAVKKVYEQRAQMIETGEGIDW 638

Query: 183 AVAEALAFATLLVEGNHVRLSGQDVERGTFSHR 281
           AVAEALAFATLLVEGNHVRLSGQDVERGTFSHR
Sbjct: 639 AVAEALAFATLLVEGNHVRLSGQDVERGTFSHR 671


>ref|XP_002312072.1| predicted protein [Populus trichocarpa] gi|222851892|gb|EEE89439.1|
           predicted protein [Populus trichocarpa]
          Length = 1021

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/93 (91%), Positives = 91/93 (97%)
 Frame = +3

Query: 3   GFKSPEQVSRIRNTGVKPEILKNVGKATTTLPDNFKPHRAVKKIYEQRSQMIETGKGIDW 182
           GFKSPEQ+SR+RNTGVKPEILKNVGKA TTLPDNFKPHRAVKK+Y+QR+QMIETG+GIDW
Sbjct: 579 GFKSPEQLSRVRNTGVKPEILKNVGKAITTLPDNFKPHRAVKKVYDQRAQMIETGEGIDW 638

Query: 183 AVAEALAFATLLVEGNHVRLSGQDVERGTFSHR 281
           AV EALAFATLLVEGNHVRLSGQDVERGTFSHR
Sbjct: 639 AVGEALAFATLLVEGNHVRLSGQDVERGTFSHR 671


>ref|XP_002315242.1| predicted protein [Populus trichocarpa] gi|222864282|gb|EEF01413.1|
           predicted protein [Populus trichocarpa]
          Length = 1021

 Score =  176 bits (445), Expect = 2e-42
 Identities = 84/93 (90%), Positives = 89/93 (95%)
 Frame = +3

Query: 3   GFKSPEQVSRIRNTGVKPEILKNVGKATTTLPDNFKPHRAVKKIYEQRSQMIETGKGIDW 182
           GFKSPEQ+SR+RNTGVKPEILKNVGKA TT P+NFKPHRAVKK+YEQR QMIETG+GIDW
Sbjct: 579 GFKSPEQLSRVRNTGVKPEILKNVGKAITTFPENFKPHRAVKKVYEQRLQMIETGEGIDW 638

Query: 183 AVAEALAFATLLVEGNHVRLSGQDVERGTFSHR 281
           AV EALAFATLLVEGNHVRLSGQDVERGTFSHR
Sbjct: 639 AVGEALAFATLLVEGNHVRLSGQDVERGTFSHR 671


>ref|XP_004147698.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like
           [Cucumis sativus] gi|449518101|ref|XP_004166082.1|
           PREDICTED: 2-oxoglutarate dehydrogenase,
           mitochondrial-like [Cucumis sativus]
          Length = 1022

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/93 (88%), Positives = 89/93 (95%)
 Frame = +3

Query: 3   GFKSPEQVSRIRNTGVKPEILKNVGKATTTLPDNFKPHRAVKKIYEQRSQMIETGKGIDW 182
           GFKSPEQ+SR+RNTGVKPEILKNVGKA T  P+NFKPHRAVKK+YEQR+QMIETG+GIDW
Sbjct: 580 GFKSPEQISRVRNTGVKPEILKNVGKAITVFPENFKPHRAVKKVYEQRAQMIETGEGIDW 639

Query: 183 AVAEALAFATLLVEGNHVRLSGQDVERGTFSHR 281
           A+ EALAFATLLVEGNHVRLSGQDVERGTFSHR
Sbjct: 640 ALGEALAFATLLVEGNHVRLSGQDVERGTFSHR 672


>ref|XP_002876300.1| hypothetical protein ARALYDRAFT_485968 [Arabidopsis lyrata subsp.
           lyrata] gi|297322138|gb|EFH52559.1| hypothetical protein
           ARALYDRAFT_485968 [Arabidopsis lyrata subsp. lyrata]
          Length = 1017

 Score =  171 bits (434), Expect = 4e-41
 Identities = 79/93 (84%), Positives = 92/93 (98%)
 Frame = +3

Query: 3   GFKSPEQVSRIRNTGVKPEILKNVGKATTTLPDNFKPHRAVKKIYEQRSQMIETGKGIDW 182
           GFKSPEQ+SR+RNTGVKPEILK+VGKA ++LP+NFKPHRAVKK+YEQR+QMIE+G+G+DW
Sbjct: 578 GFKSPEQISRVRNTGVKPEILKSVGKAISSLPENFKPHRAVKKVYEQRAQMIESGEGVDW 637

Query: 183 AVAEALAFATLLVEGNHVRLSGQDVERGTFSHR 281
           A+AEALAFATL+VEGNHVRLSGQDVERGTFSHR
Sbjct: 638 ALAEALAFATLVVEGNHVRLSGQDVERGTFSHR 670


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