BLASTX nr result

ID: Coptis24_contig00018439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018439
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313348.1| predicted protein [Populus trichocarpa] gi|2...    49   4e-06

>ref|XP_002313348.1| predicted protein [Populus trichocarpa] gi|222849756|gb|EEE87303.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score = 49.3 bits (116), Expect(2) = 4e-06
 Identities = 22/26 (84%), Positives = 23/26 (88%), Gaps = 3/26 (11%)
 Frame = +2

Query: 2   KDLFGGCYYPAAS---IPNQPNCVVK 70
           KDLFGGCYYPAAS   +PNQPNCVVK
Sbjct: 399 KDLFGGCYYPAASMYTLPNQPNCVVK 424



 Score = 26.2 bits (56), Expect(2) = 4e-06
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 97  FFLEEFGGRPIRTPMIE 147
           FF E+FGGR +  PMI+
Sbjct: 433 FFPEDFGGRQVPKPMID 449


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