BLASTX nr result

ID: Coptis24_contig00018435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018435
         (1434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein...   432   e-118
ref|XP_002298532.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116
ref|XP_002526513.1| protein binding protein, putative [Ricinus c...   410   e-112
ref|XP_004133954.1| PREDICTED: sister chromatid cohesion protein...   395   e-107
ref|XP_003527519.1| PREDICTED: sister chromatid cohesion protein...   394   e-107

>ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Vitis
            vinifera]
          Length = 397

 Score =  432 bits (1110), Expect = e-118
 Identities = 226/388 (58%), Positives = 272/388 (70%), Gaps = 19/388 (4%)
 Frame = +1

Query: 10   AEAVLNLEQQNSSISITYDTNFGPHXXXXXXXXXXXXXPHVLNNRVTIRGNVEEDAVLCT 189
            AEAVLNL Q NSSISITY  +FGPH             P VL+ RVT+RG   EDAVLCT
Sbjct: 12   AEAVLNL-QPNSSISITYHPHFGPHDDLILLEIDDKLLPDVLHQRVTLRGQPNEDAVLCT 70

Query: 190  PSTTYALKFVGTTNSVFLIPPFG---------------DVEASVASVIKVAPGVMELVEV 324
             S TY++KFVG +NSVFLIPP                 D +  VASVIKVAPG MELVEV
Sbjct: 71   QSKTYSIKFVGNSNSVFLIPPVDQSALHEHPQYSDEKDDDQRVVASVIKVAPGNMELVEV 130

Query: 325  APXXXXXXXXXXXNPYNGNE----DFMEMGESCEIGLYRWDDLVERVQASDVELREGLRA 492
            AP           NP+   E    + +E  E  +  L++W+DL++RVQASD ELR GLRA
Sbjct: 131  APRLDKLKLLLLENPFTSEEVSEKEELEGMEEQKTNLFKWNDLIDRVQASDDELRSGLRA 190

Query: 493  FSAVEINGYWRVVEESFMGMVLNMLLHNSVLSGWSLDXXXXXXXXXXXXSDGFLREIARL 672
             SAVEI+GYWR+V+E +MG +LNMLLHNSVL+ WSLD            SDGF R +   
Sbjct: 191  LSAVEIDGYWRIVDEKYMGTILNMLLHNSVLNDWSLDALGEDEVVGVLESDGFPRTLGLH 250

Query: 673  CLEMYGDKVEDEVGGGYVWKLNEKRVCVHFARSVLNEGKMKMESFMEKWMQKIPSGMSVS 852
            CL++YG KV++ VG   VWKL+E+R+C+HFAR +L +GK KMESFME+W+QKIP GM  S
Sbjct: 251  CLQVYGSKVDEGVGS-CVWKLDERRLCIHFAREILKDGKRKMESFMEEWIQKIPDGMQAS 309

Query: 853  FEMLEGEVLLEKLGIETWIRSFSVSSLPLTPAERFAALFRERQKWESMDLEPYIRDLRVP 1032
            F+MLEGEVL EK G+ETW+R+FSVSSLP  PA RF+ LF+ER KWE  DL+PYIRDL VP
Sbjct: 310  FDMLEGEVLTEKFGVETWVRAFSVSSLPSNPAARFSMLFQERPKWEWKDLQPYIRDLTVP 369

Query: 1033 GLSAEGLLLKYTRRTQPTADAEPIFSAR 1116
            GLS+EGLLLKYTR+TQP +DAEP+FSAR
Sbjct: 370  GLSSEGLLLKYTRKTQPNSDAEPVFSAR 397


>ref|XP_002298532.1| predicted protein [Populus trichocarpa] gi|222845790|gb|EEE83337.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  423 bits (1088), Expect = e-116
 Identities = 224/387 (57%), Positives = 268/387 (69%), Gaps = 16/387 (4%)
 Frame = +1

Query: 4    KMAEAVLNLEQQNSSISITYDTNFGPHXXXXXXXXXXXXXPHVLNNRVTIRGNVEEDAVL 183
            K AE+VLNLE  NSSI+I Y   FG H             P +L+ RV +RG ++ED+VL
Sbjct: 8    KGAESVLNLEP-NSSIAIGYHALFGSHDDLMLLEIDEKLFPDILHERVALRGQLDEDSVL 66

Query: 184  CTPSTTYALKFVGTTNSVFLIPPFG---------DVEASV---ASVIKVAPGVMELVEVA 327
            CT S TYA+KFVG +NS FLIPP G         D +  +   A VIKVAPG MELVEVA
Sbjct: 67   CTQSKTYAIKFVGNSNSPFLIPPSGQFALCENSQDFDGEINDFAPVIKVAPGNMELVEVA 126

Query: 328  PXXXXXXXXXXXNPYNGNE----DFMEMGESCEIGLYRWDDLVERVQASDVELREGLRAF 495
            P           NPY+  +    DFME  E  +  LY WDDLVERVQASD ELR GL A 
Sbjct: 127  PKLDRLKLLLSENPYSYEDVLEMDFMEDVEKNKARLYNWDDLVERVQASDEELRNGLCAL 186

Query: 496  SAVEINGYWRVVEESFMGMVLNMLLHNSVLSGWSLDXXXXXXXXXXXXSDGFLREIARLC 675
            SAVEI+G+WR+V+E +M M+L MLLHNS+L+ WSLD            SDGF  ++A  C
Sbjct: 187  SAVEIDGFWRIVDEKYMDMILRMLLHNSILNDWSLDALNEDDVVSVLVSDGFPDKLACHC 246

Query: 676  LEMYGDKVEDEVGGGYVWKLNEKRVCVHFARSVLNEGKMKMESFMEKWMQKIPSGMSVSF 855
            L +YG KV+ +VG   VW+L+E RVCVHFAR +L+ GK KME+FM +W+Q+IP  M  SF
Sbjct: 247  LHVYGSKVDGDVGRSCVWRLDESRVCVHFARQILSTGKKKMETFMAEWLQRIPGRMQASF 306

Query: 856  EMLEGEVLLEKLGIETWIRSFSVSSLPLTPAERFAALFRERQKWESMDLEPYIRDLRVPG 1035
             MLEGEVL EKLG+ETW+ SFSVSSLPLTPAERF  LFRER KWE  DL+PYIRDL+VPG
Sbjct: 307  NMLEGEVLTEKLGVETWVYSFSVSSLPLTPAERFNMLFRERSKWEWKDLQPYIRDLKVPG 366

Query: 1036 LSAEGLLLKYTRRTQPTADAEPIFSAR 1116
            LS+EGLLLKYTRRTQPT DA+P+FS+R
Sbjct: 367  LSSEGLLLKYTRRTQPTLDADPVFSSR 393


>ref|XP_002526513.1| protein binding protein, putative [Ricinus communis]
            gi|223534188|gb|EEF35904.1| protein binding protein,
            putative [Ricinus communis]
          Length = 396

 Score =  410 bits (1055), Expect = e-112
 Identities = 220/389 (56%), Positives = 263/389 (67%), Gaps = 20/389 (5%)
 Frame = +1

Query: 10   AEAVLNLEQQNSSISITYDTNFGPHXXXXXXXXXXXXXPHVLNNRVTIRGNVEEDAVLCT 189
            AEAVLNL Q NSS+++ Y   FG H             P VL+ RVT+RG  +EDAVLCT
Sbjct: 11   AEAVLNL-QPNSSVAVGYHPLFGSHDDLILLELDHNLLPDVLHQRVTLRGQPDEDAVLCT 69

Query: 190  PSTTYALKFVGTTNSVFLIPPFG---------DVEASV------ASVIKVAPGVMELVEV 324
             S TY++KFVGT+NS FLIP  G         D +A V      A +IK+APG MEL EV
Sbjct: 70   QSKTYSIKFVGTSNSSFLIPQSGQFSMYDYPEDCDARVHARQLFAPIIKLAPGNMELTEV 129

Query: 325  APXXXXXXXXXXXNPYNGN-----EDFMEMGESCEIGLYRWDDLVERVQASDVELREGLR 489
            +P           NPY  +     ED ++ G+  + GLY WDDLV  VQAS+ ELR GL+
Sbjct: 130  SPRLDKLRLLLSENPYKSDGVLDMED-LDTGKD-KTGLYTWDDLVGMVQASNNELRSGLQ 187

Query: 490  AFSAVEINGYWRVVEESFMGMVLNMLLHNSVLSGWSLDXXXXXXXXXXXXSDGFLREIAR 669
            A SAVEI+GYWR+V+E +M  +L MLLHNS+L+ WSLD            SDGF  ++A 
Sbjct: 188  ALSAVEIDGYWRIVDEKYMDTILRMLLHNSILNDWSLDFLNEDEVTNLLASDGFPHKLAH 247

Query: 670  LCLEMYGDKVEDEVGGGYVWKLNEKRVCVHFARSVLNEGKMKMESFMEKWMQKIPSGMSV 849
             CL +YG KV   VG GYVWKL+E+RVCVHFAR  L  GK KME FM +W++KIP GM  
Sbjct: 248  HCLNVYGTKVNGGVGTGYVWKLDERRVCVHFARETLRAGKKKMEDFMGEWLKKIPDGMEA 307

Query: 850  SFEMLEGEVLLEKLGIETWIRSFSVSSLPLTPAERFAALFRERQKWESMDLEPYIRDLRV 1029
             F+MLEGEVL EKLG+ETW+R FS+SSLP TPAERF+ LFRER KWE  DL PYIRDL+V
Sbjct: 308  KFDMLEGEVLTEKLGVETWVRPFSISSLPSTPAERFSMLFRERSKWEWKDLHPYIRDLKV 367

Query: 1030 PGLSAEGLLLKYTRRTQPTADAEPIFSAR 1116
            PGLS+E LLLKYTRRTQP+ DAEPIFSAR
Sbjct: 368  PGLSSEALLLKYTRRTQPSLDAEPIFSAR 396


>ref|XP_004133954.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Cucumis
            sativus] gi|449518342|ref|XP_004166201.1| PREDICTED:
            sister chromatid cohesion protein DCC1-like [Cucumis
            sativus]
          Length = 393

 Score =  395 bits (1015), Expect = e-107
 Identities = 206/386 (53%), Positives = 255/386 (66%), Gaps = 15/386 (3%)
 Frame = +1

Query: 4    KMAEAVLNLEQQNSSISITYDTNFGPHXXXXXXXXXXXXXPHVLNNRVTIRGNVEEDAVL 183
            K A+AVLNL Q NSSISI Y + FGPH               VL+ RV+IRG  EEDAV 
Sbjct: 9    KGADAVLNL-QPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQPEEDAVF 67

Query: 184  CTPSTTYALKFVGTTNSVFLIPPFG--------------DVEASVASVIKVAPGVMELVE 321
            CT S TY +K+VGT+NSV LIPP G              D    VA VIKVAPG+MEL E
Sbjct: 68   CTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAPGIMELHE 127

Query: 322  VAPXXXXXXXXXXXNPYNGNEDFM-EMGESCEIGLYRWDDLVERVQASDVELREGLRAFS 498
            +AP             Y+  +++  E  +  E  +Y WDDL+ +VQASD EL+ GL+A S
Sbjct: 128  IAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELKAGLQALS 187

Query: 499  AVEINGYWRVVEESFMGMVLNMLLHNSVLSGWSLDXXXXXXXXXXXXSDGFLREIARLCL 678
            AVEI+GYWR+V+E +M  +L MLLHN +L+ WSLD             DGF  ++ + CL
Sbjct: 188  AVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPEKLVQHCL 247

Query: 679  EMYGDKVEDEVGGGYVWKLNEKRVCVHFARSVLNEGKMKMESFMEKWMQKIPSGMSVSFE 858
             +YGDK+++  G   +W+LNEKRVCVHFAR VL +GKMK+E  M++W QKIP GM  +F+
Sbjct: 248  HVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPLGMCANFD 307

Query: 859  MLEGEVLLEKLGIETWIRSFSVSSLPLTPAERFAALFRERQKWESMDLEPYIRDLRVPGL 1038
            MLEGEVL E+LG+ETW+R F V  LP  PAERF  LF+ER KWE  DL+PYIRDL VPGL
Sbjct: 308  MLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIRDLTVPGL 367

Query: 1039 SAEGLLLKYTRRTQPTADAEPIFSAR 1116
            S+EGLLLKYTRRTQP  +AE +FSAR
Sbjct: 368  SSEGLLLKYTRRTQPNPEAEAVFSAR 393


>ref|XP_003527519.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Glycine max]
          Length = 396

 Score =  394 bits (1011), Expect = e-107
 Identities = 205/387 (52%), Positives = 261/387 (67%), Gaps = 18/387 (4%)
 Frame = +1

Query: 10   AEAVLNLEQQNSSISITYDTNFGPHXXXXXXXXXXXXXPHVLNNRVTIRGNVEEDAVLCT 189
            AEA+ ++    SSIS+ Y ++FGP+             P VLN RV +RG  +EDAVLCT
Sbjct: 12   AEALKHIAP-GSSISVAYHSSFGPYEDLLFLELDEKLLPDVLNERVVLRGQPDEDAVLCT 70

Query: 190  PSTTYALKFVGTTNSVFLIPPFG---------------DVEASVASVIKVAPGVMELVEV 324
             S TYA+KFVGT+NSV L+PP                 D E  VA V+KV  G MEL+E 
Sbjct: 71   QSKTYAMKFVGTSNSVLLVPPANHSEYYENQLKNDSNSDEEKVVAPVLKVVSGNMELIET 130

Query: 325  APXXXXXXXXXXXNPYNGNEDFM---EMGESCEIGLYRWDDLVERVQASDVELREGLRAF 495
            AP            PY   ED M   E  +   IGLY W+DLV+ +QASD EL  GL+A 
Sbjct: 131  APRLDKLKSLLSEKPYKLEEDDMGNLEENQESRIGLYNWNDLVDNIQASDEELLSGLQAL 190

Query: 496  SAVEINGYWRVVEESFMGMVLNMLLHNSVLSGWSLDXXXXXXXXXXXXSDGFLREIARLC 675
            SA+EI GYWR+V+ S+M M+L M+L N+VL+ WSL+            SDGF   +AR C
Sbjct: 191  SALEIYGYWRLVDGSYMDMILGMILKNAVLNDWSLNALNEDEVVSTLESDGFPGVLARHC 250

Query: 676  LEMYGDKVEDEVGGGYVWKLNEKRVCVHFARSVLNEGKMKMESFMEKWMQKIPSGMSVSF 855
            L +YG++V +E    +VWKL+EKRVC+HFAR +L  GK K+ESFM++W QKIP GM  +F
Sbjct: 251  LNVYGNRV-NECMPSFVWKLDEKRVCIHFARDILKGGKRKLESFMDEWRQKIPDGMQPTF 309

Query: 856  EMLEGEVLLEKLGIETWIRSFSVSSLPLTPAERFAALFRERQKWESMDLEPYIRDLRVPG 1035
            +++EGEVL EK+G+ETW+ +FSV+SLP TPAERF+ LFRER KWE  DL+PYIRDL++PG
Sbjct: 310  DLVEGEVLTEKIGVETWVHAFSVASLPSTPAERFSILFRERPKWEWKDLQPYIRDLKLPG 369

Query: 1036 LSAEGLLLKYTRRTQPTADAEPIFSAR 1116
            LS+EGLLLKYTRRTQP+ADAEP+FSAR
Sbjct: 370  LSSEGLLLKYTRRTQPSADAEPVFSAR 396


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