BLASTX nr result

ID: Coptis24_contig00018433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018433
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865219.1| hypothetical protein ARALYDRAFT_916858 [Arab...   129   9e-28
ref|XP_002273902.2| PREDICTED: ubiquitin-like modifier-activatin...   127   2e-27
emb|CBI30675.3| unnamed protein product [Vitis vinifera]              127   2e-27
dbj|BAB09318.1| ubiquitin activating enzyme E1-like protein [Ara...   122   8e-26
pdb|3VX8|D Chain D, Crystal Structure Of Arabidopsis Thaliana At...   122   8e-26

>ref|XP_002865219.1| hypothetical protein ARALYDRAFT_916858 [Arabidopsis lyrata subsp.
           lyrata] gi|297311054|gb|EFH41478.1| hypothetical protein
           ARALYDRAFT_916858 [Arabidopsis lyrata subsp. lyrata]
          Length = 697

 Score =  129 bits (323), Expect = 9e-28
 Identities = 66/116 (56%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
 Frame = +2

Query: 206 IWEDIRSGRAVEDXXXXXXXXXXXXADLKK*SFNYRFALPALKVDPLTTLIDLRPVSVYF 385
           IWEDI+SG+A+ED            ADLKK SF Y FA PAL +DP  +LI+L+P S YF
Sbjct: 118 IWEDIQSGKALEDSSVLSRFLVISFADLKKWSFRYWFAFPALVLDPPVSLIELKPASEYF 177

Query: 386 NLEEAESLSATCNE*RNSSLTADVPFFLVSI-TESLATISPLRVWEACQGDHTKVV 550
           + EEAES+SA CN+ R+S LT DVPFFLVS+ ++S A+I  L+ WEACQGDH K++
Sbjct: 178 SSEEAESVSAACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDWEACQGDHQKLL 233


>ref|XP_002273902.2| PREDICTED: ubiquitin-like modifier-activating enzyme atg7-like
           [Vitis vinifera]
          Length = 711

 Score =  127 bits (320), Expect = 2e-27
 Identities = 70/116 (60%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
 Frame = +2

Query: 206 IWEDIRSGRAVEDXXXXXXXXXXXXADLKK*SFNYRFALPALKVDPLTTLIDLRPVSVYF 385
           IW DI SGRA ED            ADLKK SF+Y FA PAL +DP  TL+DL+P S +F
Sbjct: 119 IWNDIHSGRAEEDCSVLSRFLLISFADLKKWSFHYWFAFPALVLDPPATLVDLKPASQWF 178

Query: 386 NLEEAESLSATCNE*RNSSLTADVPFFLVSI-TESLATISPLRVWEACQGDHTKVV 550
           +LEEAES+SA CNE RNSS TADVPFFLVSI + S ATI  L+ WEACQ D  K++
Sbjct: 179 SLEEAESVSAACNEWRNSSSTADVPFFLVSIASNSRATIRHLKDWEACQEDGHKLL 234


>emb|CBI30675.3| unnamed protein product [Vitis vinifera]
          Length = 787

 Score =  127 bits (320), Expect = 2e-27
 Identities = 70/116 (60%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
 Frame = +2

Query: 206 IWEDIRSGRAVEDXXXXXXXXXXXXADLKK*SFNYRFALPALKVDPLTTLIDLRPVSVYF 385
           IW DI SGRA ED            ADLKK SF+Y FA PAL +DP  TL+DL+P S +F
Sbjct: 195 IWNDIHSGRAEEDCSVLSRFLLISFADLKKWSFHYWFAFPALVLDPPATLVDLKPASQWF 254

Query: 386 NLEEAESLSATCNE*RNSSLTADVPFFLVSI-TESLATISPLRVWEACQGDHTKVV 550
           +LEEAES+SA CNE RNSS TADVPFFLVSI + S ATI  L+ WEACQ D  K++
Sbjct: 255 SLEEAESVSAACNEWRNSSSTADVPFFLVSIASNSRATIRHLKDWEACQEDGHKLL 310


>dbj|BAB09318.1| ubiquitin activating enzyme E1-like protein [Arabidopsis thaliana]
          Length = 678

 Score =  122 bits (306), Expect = 8e-26
 Identities = 64/116 (55%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
 Frame = +2

Query: 206 IWEDIRSGRAVEDXXXXXXXXXXXXADLKK*SFNYRFALPALKVDPLTTLIDLRPVSVYF 385
           IWEDI+SG+A+ED            ADLKK SF Y FA PA  +DP  +LI+L+P S YF
Sbjct: 99  IWEDIQSGKALEDPSVLPRFLVISFADLKKWSFRYWFAFPAFVLDPPVSLIELKPASEYF 158

Query: 386 NLEEAESLSATCNE*RNSSLTADVPFFLVSI-TESLATISPLRVWEACQGDHTKVV 550
           + EEAES+SA CN+ R+S LT DVPFFLVS+ ++S A+I  L+  EACQGDH K++
Sbjct: 159 SSEEAESVSAACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDLEACQGDHQKLL 214


>pdb|3VX8|D Chain D, Crystal Structure Of Arabidopsis Thaliana Atg7ntd-Atg3
           Complex gi|414145389|pdb|3VX8|A Chain A, Crystal
           Structure Of Arabidopsis Thaliana Atg7ntd-Atg3 Complex
          Length = 323

 Score =  122 bits (306), Expect = 8e-26
 Identities = 64/116 (55%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
 Frame = +2

Query: 206 IWEDIRSGRAVEDXXXXXXXXXXXXADLKK*SFNYRFALPALKVDPLTTLIDLRPVSVYF 385
           IWEDI+SG+A+ED            ADLKK SF Y FA PA  +DP  +LI+L+P S YF
Sbjct: 116 IWEDIQSGKALEDPSVLPRFLVISFADLKKWSFRYWFAFPAFVLDPPVSLIELKPASEYF 175

Query: 386 NLEEAESLSATCNE*RNSSLTADVPFFLVSI-TESLATISPLRVWEACQGDHTKVV 550
           + EEAES+SA CN+ R+S LT DVPFFLVS+ ++S A+I  L+  EACQGDH K++
Sbjct: 176 SSEEAESVSAACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDLEACQGDHQKLL 231


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