BLASTX nr result

ID: Coptis24_contig00018432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018432
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunction...   290   5e-76
ref|XP_002330733.1| predicted protein [Populus trichocarpa] gi|2...   276   4e-72
ref|NP_001240208.1| uncharacterized protein LOC100807276 [Glycin...   275   2e-71
gb|ABK93460.1| unknown [Populus trichocarpa]                          273   5e-71
ref|XP_002443519.1| hypothetical protein SORBIDRAFT_08g020870 [S...   268   2e-69

>ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunctional protein hisIE,
            chloroplastic [Vitis vinifera]
            gi|296082253|emb|CBI21258.3| unnamed protein product
            [Vitis vinifera]
          Length = 289

 Score =  290 bits (741), Expect = 5e-76
 Identities = 147/187 (78%), Positives = 162/187 (86%), Gaps = 1/187 (0%)
 Frame = -3

Query: 1020 KATFYSRSRSSLWTKGETSKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSV 841
            KATFYSRSRS LWTKGETS NFIN+ DIFLDCDRDSIIYLGKPDGPTCHTGSETCYY SV
Sbjct: 103  KATFYSRSRSKLWTKGETSLNFINIHDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYSSV 162

Query: 840  NDYLKGSEVKENT-LALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIR 664
             D LK  + +EN  LALT LYSLESTISQR+AE+ + +NGKPSWTKRLLLD KLLCSKIR
Sbjct: 163  FDLLKNPQGEENNNLALTALYSLESTISQRKAEVASPQNGKPSWTKRLLLDDKLLCSKIR 222

Query: 663  EEADELCRTLEENKNKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEK 484
            EEADELCRT EEN++KSR A+E ADVL+H+MVLL  KDV +EEVLQVLR RFS+SGIEEK
Sbjct: 223  EEADELCRTHEENEDKSRTASEMADVLYHTMVLLSLKDVKMEEVLQVLRHRFSQSGIEEK 282

Query: 483  NSRS*HG 463
             SR+  G
Sbjct: 283  KSRATQG 289


>ref|XP_002330733.1| predicted protein [Populus trichocarpa] gi|222872509|gb|EEF09640.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  276 bits (707), Expect = 4e-72
 Identities = 136/182 (74%), Positives = 156/182 (85%)
 Frame = -3

Query: 1020 KATFYSRSRSSLWTKGETSKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSV 841
            KATFYSRSRS+LWTKGETSKNFINV DI+LDCDRDSIIYLGKPDGPTCHTGSETCYY SV
Sbjct: 104  KATFYSRSRSALWTKGETSKNFINVHDIYLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 163

Query: 840  NDYLKGSEVKENTLALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIRE 661
             D L+  +V  N LALTTLYSLE+ ISQR+AEL   + GKPSWTKRLLLD  LLC+KIRE
Sbjct: 164  PDLLENKQVDGNKLALTTLYSLETIISQRKAELALPQTGKPSWTKRLLLDHDLLCTKIRE 223

Query: 660  EADELCRTLEENKNKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKN 481
            EADELCRTLE+N++++R A E  DVL+H+MVL+  K V +EEVL+VLR+RF +SGIEEK 
Sbjct: 224  EADELCRTLEDNEDQARTADEMGDVLYHAMVLMAVKGVKIEEVLEVLRKRFFQSGIEEKR 283

Query: 480  SR 475
            SR
Sbjct: 284  SR 285


>ref|NP_001240208.1| uncharacterized protein LOC100807276 [Glycine max]
            gi|255641260|gb|ACU20907.1| unknown [Glycine max]
          Length = 281

 Score =  275 bits (702), Expect = 2e-71
 Identities = 137/182 (75%), Positives = 157/182 (86%)
 Frame = -3

Query: 1020 KATFYSRSRSSLWTKGETSKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSV 841
            KATFYSRSRS+LWTKGETS NFINV D+F+DCDRDSIIYLGKPDGPTCHTG+ETCYY SV
Sbjct: 93   KATFYSRSRSTLWTKGETSNNFINVHDVFIDCDRDSIIYLGKPDGPTCHTGAETCYYTSV 152

Query: 840  NDYLKGSEVKENTLALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIRE 661
             D LK  E +EN LALT+LY+LESTISQR+ EL   EN KPSWTKRLLL+ KLLCSKIRE
Sbjct: 153  FDLLKQQEAEENKLALTSLYALESTISQRKTELIG-ENEKPSWTKRLLLNDKLLCSKIRE 211

Query: 660  EADELCRTLEENKNKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKN 481
            EA+ELC+TLE N+++ R A+E ADVL+H+MVLL  K V +E+VLQVLR RFS+SGIEEK 
Sbjct: 212  EANELCQTLENNEDEKRTASEMADVLYHAMVLLAKKGVKIEDVLQVLRLRFSQSGIEEKK 271

Query: 480  SR 475
            SR
Sbjct: 272  SR 273


>gb|ABK93460.1| unknown [Populus trichocarpa]
          Length = 200

 Score =  273 bits (698), Expect = 5e-71
 Identities = 135/182 (74%), Positives = 155/182 (85%)
 Frame = -3

Query: 1020 KATFYSRSRSSLWTKGETSKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSV 841
            KATFYSRSRS+LWTKGETSKNFINV DI+LDCDRDSIIYLGKPDGPTCHTGSETCYY SV
Sbjct: 18   KATFYSRSRSALWTKGETSKNFINVHDIYLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 77

Query: 840  NDYLKGSEVKENTLALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIRE 661
             D L+  +V  N LALTTLYSLE+ IS+R+AEL   + GKPSWTKRLLLD  LLC KIRE
Sbjct: 78   PDLLENKQVDGNKLALTTLYSLETIISERKAELALPQIGKPSWTKRLLLDHDLLCLKIRE 137

Query: 660  EADELCRTLEENKNKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKN 481
            EADELCRTLE+N++++R A E  DVL+H+MVL+  K V +EEVL+VLR+RF +SGIEEK 
Sbjct: 138  EADELCRTLEDNEDQARTADEMGDVLYHAMVLMAVKGVKIEEVLEVLRKRFFQSGIEEKR 197

Query: 480  SR 475
            SR
Sbjct: 198  SR 199


>ref|XP_002443519.1| hypothetical protein SORBIDRAFT_08g020870 [Sorghum bicolor]
            gi|241944212|gb|EES17357.1| hypothetical protein
            SORBIDRAFT_08g020870 [Sorghum bicolor]
          Length = 306

 Score =  268 bits (684), Expect = 2e-69
 Identities = 134/183 (73%), Positives = 156/183 (85%)
 Frame = -3

Query: 1020 KATFYSRSRSSLWTKGETSKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSV 841
            KATF+SRSRSSLWTKGETS NFINV DIFLDCDRDSIIYLGKPDGPTCHTG+ETCYY SV
Sbjct: 122  KATFFSRSRSSLWTKGETSMNFINVHDIFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSV 181

Query: 840  NDYLKGSEVKENTLALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIRE 661
             D L+ S+  E    +TTLYSLE TIS+RQ E+     GKPSWTK+LLLD +LLCSKIRE
Sbjct: 182  YDALQSSKPNEGRQVVTTLYSLEDTISRRQEEIVTEGGGKPSWTKKLLLDNQLLCSKIRE 241

Query: 660  EADELCRTLEENKNKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKN 481
            EA EL +TL EN+++SRAA+E AD+L+H+MVLL+ KDV +EEVL+VLR+RFS+SGIEEK 
Sbjct: 242  EAGELIQTLLENEDQSRAASEMADLLYHAMVLLRVKDVKMEEVLEVLRKRFSQSGIEEKA 301

Query: 480  SRS 472
            SRS
Sbjct: 302  SRS 304


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