BLASTX nr result

ID: Coptis24_contig00018430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018430
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69337.1| hypothetical protein VITISV_032631 [Vitis vinifera]   144   1e-32
ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296...   133   1e-29
gb|AFW82937.1| ankyrin-1 [Zea mays]                                   130   1e-28
gb|ACG34554.1| ankyrin-1 [Zea mays]                                   130   1e-28
ref|NP_001146656.1| uncharacterized protein LOC100280256 [Zea ma...   130   1e-28

>emb|CAN69337.1| hypothetical protein VITISV_032631 [Vitis vinifera]
          Length = 433

 Score =  144 bits (362), Expect = 1e-32
 Identities = 77/154 (50%), Positives = 101/154 (65%)
 Frame = -1

Query: 473 GTTPLIIAANKGETERVECLLGAGADPNVTNTMGDKAIEIAASNPDGNCEAVTILFKVTS 294
           G TPL IAA+ G  E + CLL AGADPNVT+  G KAI++AA+   GN   V ILF +TS
Sbjct: 219 GATPLHIAADIGSPEIINCLLKAGADPNVTDEDGQKAIQVAAAR--GNRGVVEILFPLTS 276

Query: 293 PIPAYPNWSISGIMTHLQSEEFRQQGKLKLKEKFLNAISKAEDAFTRKDYLTANFYYAEA 114
           PI + P W+I GI+ H+QSE  +QQ   + K+K   A S+ +DAF  KDY  A   Y +A
Sbjct: 277 PIQSVPEWTIDGIIEHMQSEMGKQQVSPEAKKKAAEAKSRGDDAFKAKDYYMAVDAYTQA 336

Query: 113 SCLDRSDATVLSKKSLCWASLNEGEFALEEANAC 12
             +D +DAT+LS +SLCW  L + E AL++A AC
Sbjct: 337 IDVDPTDATLLSNRSLCWIRLGQAEHALDDAKAC 370


>ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296087918|emb|CBI35201.3|
           unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  133 bits (335), Expect = 1e-29
 Identities = 77/176 (43%), Positives = 102/176 (57%), Gaps = 22/176 (12%)
 Frame = -1

Query: 473 GTTPLIIAANKGETERVECLLGAGADPNVTNTMGDKAIEIAASNPDGNCEAVTILFKVTS 294
           G TPL IAA+ G  E + CLL AGADPNVT+  G KAI++AA+   GN   V ILF +TS
Sbjct: 219 GATPLHIAADIGSPEIINCLLKAGADPNVTDEDGQKAIQVAAAR--GNRGVVEILFPLTS 276

Query: 293 PIPAYPNWSISGIMTHLQSEEFRQQGKLK----------------------LKEKFLNAI 180
           PI + P W+I GI+ H+QSE  +QQ + +                       K+K   A 
Sbjct: 277 PIQSVPEWTIDGIIEHMQSEMGKQQDETRNVKEANVETTLSKQDIPQVSPEAKKKAAEAK 336

Query: 179 SKAEDAFTRKDYLTANFYYAEASCLDRSDATVLSKKSLCWASLNEGEFALEEANAC 12
           S+ +DAF  KDY  A   Y +A  +D +DAT+LS +SLCW  L + E AL++A AC
Sbjct: 337 SRGDDAFKAKDYYMAVDAYTQAIDVDPTDATLLSNRSLCWIRLGQAEHALDDAKAC 392


>gb|AFW82937.1| ankyrin-1 [Zea mays]
          Length = 456

 Score =  130 bits (327), Expect = 1e-28
 Identities = 73/172 (42%), Positives = 101/172 (58%), Gaps = 18/172 (10%)
 Frame = -1

Query: 473 GTTPLIIAANKGETERVECLLGAGADPNVTNTMGDKAIEIAASNPDGNCEAVTILFKVTS 294
           G TPL IAA+ G  E ++CLL AGADPN  +    K +++AA     N EAV +L  +TS
Sbjct: 219 GATPLHIAADSGNIEVIKCLLKAGADPNTCDDDELKPVQVAAWR--NNREAVELLLPLTS 276

Query: 293 PIPAYPNWSISGIMTHLQSEEFRQQGKLK------------------LKEKFLNAISKAE 168
           PIP   NW++ GI+ H+  +E+ ++ +LK                   K++ L A S+ +
Sbjct: 277 PIPGVSNWNVDGIIEHMLPKEYEEKSQLKEAASLKSGLTQTIEVSSEAKKRSLEAKSRGD 336

Query: 167 DAFTRKDYLTANFYYAEASCLDRSDATVLSKKSLCWASLNEGEFALEEANAC 12
           DAF RKDYL A   Y +A+ LD +DATVLS +SLCW    + E ALE+A AC
Sbjct: 337 DAFRRKDYLVAVDAYTQATELDPTDATVLSNRSLCWLRAGQAERALEDAKAC 388


>gb|ACG34554.1| ankyrin-1 [Zea mays]
          Length = 456

 Score =  130 bits (327), Expect = 1e-28
 Identities = 73/172 (42%), Positives = 101/172 (58%), Gaps = 18/172 (10%)
 Frame = -1

Query: 473 GTTPLIIAANKGETERVECLLGAGADPNVTNTMGDKAIEIAASNPDGNCEAVTILFKVTS 294
           G TPL IAA+ G  E ++CLL AGADPN  +    K +++AA     N EAV +L  +TS
Sbjct: 219 GATPLHIAADSGNIEVIKCLLKAGADPNTCDDDELKPVQVAAWR--NNHEAVELLLPLTS 276

Query: 293 PIPAYPNWSISGIMTHLQSEEFRQQGKLK------------------LKEKFLNAISKAE 168
           PIP   NW++ GI+ H+  +E+ ++ +LK                   K++ L A S+ +
Sbjct: 277 PIPGVSNWNVDGIIEHMLPKEYEEKSQLKEATSLKSGLTQTIEVSSEAKKRSLEAKSRGD 336

Query: 167 DAFTRKDYLTANFYYAEASCLDRSDATVLSKKSLCWASLNEGEFALEEANAC 12
           DAF RKDYL A   Y +A+ LD +DATVLS +SLCW    + E ALE+A AC
Sbjct: 337 DAFRRKDYLVAVDAYTQATELDPTDATVLSNRSLCWLRAGQAERALEDAKAC 388


>ref|NP_001146656.1| uncharacterized protein LOC100280256 [Zea mays]
           gi|219888205|gb|ACL54477.1| unknown [Zea mays]
          Length = 319

 Score =  130 bits (326), Expect = 1e-28
 Identities = 73/172 (42%), Positives = 100/172 (58%), Gaps = 18/172 (10%)
 Frame = -1

Query: 473 GTTPLIIAANKGETERVECLLGAGADPNVTNTMGDKAIEIAASNPDGNCEAVTILFKVTS 294
           G TPL IAA+ G  E ++CLL AGADPN  +    K +++AA     N EAV +L  +TS
Sbjct: 82  GATPLHIAADSGNIEVIKCLLKAGADPNTCDDDELKPVQVAAWR--NNREAVELLLPLTS 139

Query: 293 PIPAYPNWSISGIMTHLQSEEFRQQGKLK------------------LKEKFLNAISKAE 168
           PIP   NW + GI+ H+  +E+ ++ +LK                   K++ L A S+ +
Sbjct: 140 PIPGVSNWDVDGIIEHMLPKEYEEKSQLKEAASLKSGLTQTIEVSSEAKKRSLEAKSRGD 199

Query: 167 DAFTRKDYLTANFYYAEASCLDRSDATVLSKKSLCWASLNEGEFALEEANAC 12
           DAF RKDYL A   Y +A+ LD +DATVLS +SLCW    + E ALE+A AC
Sbjct: 200 DAFRRKDYLVAVDAYTQATELDPTDATVLSNRSLCWLRAGQAERALEDAKAC 251


Top