BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018423
         (1598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synt...   454   e-125
gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humul...   448   e-123
gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avel...   446   e-123
gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus ...   444   e-122
ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synt...   442   e-122

>ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like
            [Cucumis sativus] gi|449514740|ref|XP_004164466.1|
            PREDICTED: geranylgeranyl pyrophosphate synthase,
            chloroplastic-like [Cucumis sativus]
          Length = 363

 Score =  454 bits (1169), Expect = e-125
 Identities = 244/364 (67%), Positives = 280/364 (76%)
 Frame = -2

Query: 1279 QTCFQFNHASKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEETLEA 1100
            Q+C  F+ AS+S       G  LKR   S +  +RR    SISS + I AVLTKEETL  
Sbjct: 11   QSCSIFSQASRST------GYPLKRGLKSFIIPKRRLPTSSISS-LSICAVLTKEETLTE 63

Query: 1099 EEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILC 920
            EE +      FNF  YM  K  SVN ALD A+ L+EPL+IHE+MRYSL+AGGKRVRP+LC
Sbjct: 64   EEGKP----TFNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLC 119

Query: 919  IAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXX 740
            IAACELVGG+E          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE     
Sbjct: 120  IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 179

Query: 739  XXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATDVKLD 560
                    AFEHIA +T+GVSP +IVR + ELAKSIG+EGLVAGQVVDI S GA D  L+
Sbjct: 180  AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 239

Query: 559  QLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSE 380
            QLEYIH+HKTA LLE++VV+GAI+GGGSNE+VEKLR FAR IGLLFQVVDDILDVTKSS 
Sbjct: 240  QLEYIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 299

Query: 379  ELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIA 200
            ELGKTAGKDL++DK TYPKL+G+EKS+ FA KLN++A+EQLS FDP KAAPL+ALANYIA
Sbjct: 300  ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIA 359

Query: 199  YRQN 188
            YRQN
Sbjct: 360  YRQN 363


>gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
          Length = 369

 Score =  448 bits (1153), Expect = e-123
 Identities = 232/364 (63%), Positives = 280/364 (76%)
 Frame = -2

Query: 1279 QTCFQFNHASKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEETLEA 1100
            QTC  FN A +S  S F++      ++    +   + +R + SS+  ISAVLT++E +  
Sbjct: 10   QTCSMFNQAGRSRSSTFNLLHYHPLKKVPFSFQTPKQRRPT-SSFSSISAVLTEQEAVTE 68

Query: 1099 EEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILC 920
            +E QK     FNF SYM  KA SVNQALD A+LL+EP  IHE+MRYSLLAGGKRVRP+LC
Sbjct: 69   DEEQKST---FNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGGKRVRPVLC 125

Query: 919  IAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXX 740
            ++ACELVGGDE          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE     
Sbjct: 126  LSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 185

Query: 739  XXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATDVKLD 560
                    AFEH+A +TVGV   +I+R + ELAKSIGSEGLVAGQVVDI S G  +V L+
Sbjct: 186  AGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLE 245

Query: 559  QLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSE 380
            QLE+IH+HKTA LLE+SVV+GAI+GGG++E+VE+LR FARCIGLLFQ VDDILDVTKSS+
Sbjct: 246  QLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQ 305

Query: 379  ELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIA 200
            ELGKTAGKDL++DK TYP+L+G+EKS+ FA+KLN+EA+E L  FDP KAAPL+ALANYIA
Sbjct: 306  ELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQKAAPLIALANYIA 365

Query: 199  YRQN 188
            YRQN
Sbjct: 366  YRQN 369


>gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
          Length = 373

 Score =  446 bits (1148), Expect = e-123
 Identities = 236/368 (64%), Positives = 279/368 (75%)
 Frame = -2

Query: 1291 SPCAQTCFQFNHASKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEE 1112
            S   QTC  FN A +S         +L   ++  + +    +R SISS V +SAVLTKE+
Sbjct: 7    STWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRRRSISS-VSVSAVLTKED 65

Query: 1111 TLEAEEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVR 932
            TL  EE  +     FNF +YM  KA SVNQALD A+ LK+P KIHE+MRYSLLAGGKRVR
Sbjct: 66   TLREEEESESEARTFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGGKRVR 125

Query: 931  PILCIAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGES 752
            P+LCIAACELVGG E          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE 
Sbjct: 126  PMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGED 185

Query: 751  XXXXXXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATD 572
                        +FEHIA +T GV P +I+R + ELA+SIG+EGLVAGQVVDI S G +D
Sbjct: 186  VAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSD 245

Query: 571  VKLDQLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVT 392
            V L+ LE+IH+HKTA LLE +VV+GAI+GGGSNEEVEKLR FAR IGLLFQVVDDILDVT
Sbjct: 246  VGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVT 305

Query: 391  KSSEELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALA 212
            KSS+ELGKTAGKDL++DK TYPKL+G+EKS+ FA+KLNK+A++QL+ FD  KAAPL+ALA
Sbjct: 306  KSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAPLIALA 365

Query: 211  NYIAYRQN 188
            NYIA+RQN
Sbjct: 366  NYIAHRQN 373


>gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
          Length = 365

 Score =  444 bits (1142), Expect = e-122
 Identities = 237/355 (66%), Positives = 278/355 (78%)
 Frame = -2

Query: 1252 SKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEETLEAEEVQKKVHF 1073
            S+S  S F +   LK    S  +   +S+R   SS+  +SAVLTK+ET++ EE ++K   
Sbjct: 15   SRSRSSPFKLLHPLKSHGFSFQF--SKSQRPISSSFFTVSAVLTKQETVKEEEGEEKP-- 70

Query: 1072 AFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILCIAACELVGG 893
             FNF +YM  K  SVNQALD A+ LKEP KIHE+MRYSLLAGGKRVRP+LC+AACELVGG
Sbjct: 71   TFNFKAYMIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGG 130

Query: 892  DEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXXXXXXXXXXA 713
             E          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE             A
Sbjct: 131  HESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFA 190

Query: 712  FEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATDVKLDQLEYIHIHK 533
            FEHIA +TVGVS  +IVR + ELAKSIGSEGLVAGQVVDI S G +DV L+QLE+IH+HK
Sbjct: 191  FEHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHVHK 250

Query: 532  TAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKD 353
            TA LLE+SVV+GAI+GGGS+ E+EKLR FAR IGLLFQVVDDILDVTKSS+ELGKTAGKD
Sbjct: 251  TAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQELGKTAGKD 310

Query: 352  LMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIAYRQN 188
            L++DK TYPKL+G+EKS+ FADKLNK+A++ LS FDP KAAPL+ALANYIA+RQN
Sbjct: 311  LVADKVTYPKLMGIEKSREFADKLNKDAQDMLSGFDPEKAAPLIALANYIAHRQN 365


>ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
            [Vitis vinifera]
          Length = 368

 Score =  442 bits (1138), Expect = e-122
 Identities = 224/315 (71%), Positives = 260/315 (82%)
 Frame = -2

Query: 1132 AVLTKEETLEAEEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLL 953
            AVLTKEE +   +  ++   AFNF++Y+  KA SVN+ALD A+ ++EP+K+HESMRYSLL
Sbjct: 54   AVLTKEEMVRGGDTPEEEKPAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLL 113

Query: 952  AGGKRVRPILCIAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTN 773
            AGGKRVRP+LCIAACELVGGDE          EMIHTMSL+HDDLPCMDNDDLRRGKPTN
Sbjct: 114  AGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTN 173

Query: 772  HKVYGESXXXXXXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDI 593
            HKV+GE+            AFEH+A ATVGV P  IVR V ELAKSIGSEGLVAGQVVDI
Sbjct: 174  HKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDI 233

Query: 592  GSTGATDVKLDQLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVV 413
             S G  DV L+ LEYIH+HKTA LLE +VV+GAI+GGGSNEE+EKLRKFARCIGLLFQVV
Sbjct: 234  CSEGLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVV 293

Query: 412  DDILDVTKSSEELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKA 233
            DDILDVTKSS+ELGKTAGKDL++DK TYPKL+G+EKS+  A++LNK+AK+QLS FDP KA
Sbjct: 294  DDILDVTKSSQELGKTAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKA 353

Query: 232  APLVALANYIAYRQN 188
            APL+AL+NYIAYRQN
Sbjct: 354  APLIALSNYIAYRQN 368