BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018418
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...   115   8e-24
emb|CBI24149.3| unnamed protein product [Vitis vinifera]              115   8e-24
ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methy...   109   6e-22
ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methy...   108   1e-21
ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...   107   3e-21

>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 507

 Score =  115 bits (288), Expect = 8e-24
 Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
 Frame = -2

Query: 656 NVIGIGQFIACFGACIGNIALNNLVPERISFLRKDATEFTKEVVSRQE*WDLVILVSPKL 477
           NV G+   +        NI LNNL P +ISFLR+DATEF K+ V+R E WD+VIL  PKL
Sbjct: 355 NVTGVDTSMPALELANENIILNNLDPGKISFLRRDATEFMKDAVARNESWDIVILDPPKL 414

Query: 476 APRRK---GTSGMYGNLNSLAM*ITKRGGLLVTCSCSEAWTQ 360
           APRRK     SGMY NLNSLAM +T+RGGLL+TCSCS A TQ
Sbjct: 415 APRRKVLQSASGMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQ 456


>emb|CBI24149.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  115 bits (288), Expect = 8e-24
 Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
 Frame = -2

Query: 656 NVIGIGQFIACFGACIGNIALNNLVPERISFLRKDATEFTKEVVSRQE*WDLVILVSPKL 477
           NV G+   +        NI LNNL P +ISFLR+DATEF K+ V+R E WD+VIL  PKL
Sbjct: 235 NVTGVDTSMPALELANENIILNNLDPGKISFLRRDATEFMKDAVARNESWDIVILDPPKL 294

Query: 476 APRRK---GTSGMYGNLNSLAM*ITKRGGLLVTCSCSEAWTQ 360
           APRRK     SGMY NLNSLAM +T+RGGLL+TCSCS A TQ
Sbjct: 295 APRRKVLQSASGMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQ 336


>ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Brachypodium distachyon]
          Length = 448

 Score =  109 bits (272), Expect = 6e-22
 Identities = 61/102 (59%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
 Frame = -2

Query: 656 NVIGIGQFIACFGACIGNIALNNLVPERISFLRKDATEFTKEVVSRQE*WDLVILVSPKL 477
           NVIGI    +       NI LN L  ERISFL++DAT F K  +SR E WDLVIL  PKL
Sbjct: 296 NVIGIDSSGSALDLANENILLNKLNAERISFLKEDATAFMKGAISRNEVWDLVILDPPKL 355

Query: 476 APRRK---GTSGMYGNLNSLAM*ITKRGGLLVTCSCSEAWTQ 360
           APR+K     SGMY NLN+LAM + KRGGLL+TCSCS A TQ
Sbjct: 356 APRKKVLQSASGMYRNLNALAMQVVKRGGLLMTCSCSGAMTQ 397


>ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Cucumis sativus] gi|449475849|ref|XP_004154569.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 439

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/102 (55%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
 Frame = -2

Query: 656 NVIGIGQFIACFGACIGNIALNNLVPERISFLRKDATEFTKEVVSRQE*WDLVILVSPKL 477
           NV GI   +        N+ LN++ PERISFL+ DAT F K+ +SR E WD+VIL  PKL
Sbjct: 287 NVTGIDSSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKL 346

Query: 476 APRRK---GTSGMYGNLNSLAM*ITKRGGLLVTCSCSEAWTQ 360
           APR+K     SGMY NLNSLAM +T++GG L+TCSCS A TQ
Sbjct: 347 APRKKVLQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQ 388


>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  107 bits (266), Expect = 3e-21
 Identities = 57/102 (55%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
 Frame = -2

Query: 656 NVIGIGQFIACFGACIGNIALNNLVPERISFLRKDATEFTKEVVSRQE*WDLVILVSPKL 477
           +V G+   +        NI LNNL P RISFLR+DA +F K  +SR E WD+VIL  PKL
Sbjct: 235 DVTGVDTSMPALELARENIVLNNLDPGRISFLREDAIQFMKGALSRNESWDIVILDPPKL 294

Query: 476 APRRK---GTSGMYGNLNSLAM*ITKRGGLLVTCSCSEAWTQ 360
           APR+K     SGMY N+NS+A+ +TKRGGLL+TCSCS A TQ
Sbjct: 295 APRKKVLQNASGMYRNMNSMALRLTKRGGLLMTCSCSGAMTQ 336