BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018399
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001146094.1| uncharacterized protein LOC100279626 [Zea ma...   130   1e-28
ref|XP_003573914.1| PREDICTED: carbon catabolite repressor prote...   128   6e-28
ref|XP_002464631.1| hypothetical protein SORBIDRAFT_01g022180 [S...   127   9e-28
ref|NP_001147019.1| CCR4-NOT transcription complex subunit 6 [Ze...   127   9e-28
gb|EAY88687.1| hypothetical protein OsI_10162 [Oryza sativa Indi...   127   9e-28

>ref|NP_001146094.1| uncharacterized protein LOC100279626 [Zea mays]
           gi|219885683|gb|ACL53216.1| unknown [Zea mays]
           gi|414871444|tpg|DAA50001.1| TPA: hypothetical protein
           ZEAMMB73_180774 [Zea mays] gi|414871445|tpg|DAA50002.1|
           TPA: hypothetical protein ZEAMMB73_180774 [Zea mays]
           gi|414871446|tpg|DAA50003.1| TPA: hypothetical protein
           ZEAMMB73_180774 [Zea mays]
          Length = 605

 Score =  130 bits (326), Expect = 1e-28
 Identities = 68/137 (49%), Positives = 89/137 (64%), Gaps = 12/137 (8%)
 Frame = +1

Query: 7   GKSWITLASSKIYTPSMDDLGCILRLDYQVIHFPSTKQSLV----SLVTDRVLGFPVPRP 174
           G++W  +  S+ YTP+ DD+G  L+  ++ +   S K+S +    S++T RV+  P P P
Sbjct: 172 GETWFEVGRSRTYTPTADDIGHALK--FECVAVDSEKKSPIGPSTSIMTSRVIPAPTPTP 229

Query: 175 RRMIKVNHQ--------PQDSFHAPFRVLSYNILADMYATVVKYSYCPTWALTWEYRKKN 330
           RR+I+VN           Q S    F VLSYNILAD YAT   YSYCPTWALTW YR++N
Sbjct: 230 RRLIQVNGDVLGHLDLDSQISSLGTFTVLSYNILADAYATTDAYSYCPTWALTWNYRRQN 289

Query: 331 LLREILGYEADILCLQE 381
           LLREI+GY ADI+CLQE
Sbjct: 290 LLREIIGYHADIICLQE 306


>ref|XP_003573914.1| PREDICTED: carbon catabolite repressor protein 4 homolog 2-like
           [Brachypodium distachyon]
          Length = 605

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/135 (48%), Positives = 85/135 (62%), Gaps = 10/135 (7%)
 Frame = +1

Query: 7   GKSWITLASSKIYTPSMDDLGCILRLDYQVIHFPSTKQ--SLVSLVTDRVLGFPVPRPRR 180
           G++W  +  S+ YTP+ DD+G +LR +   +         S  S++T RV+  P P PRR
Sbjct: 171 GETWFEVGRSQTYTPTADDIGHVLRFECAAVDTEKKVPAGSPTSIMTSRVIPAPTPTPRR 230

Query: 181 MIKVNHQ--------PQDSFHAPFRVLSYNILADMYATVVKYSYCPTWALTWEYRKKNLL 336
           +I+VN           Q S    F VLSYNILAD YAT   YSYCPTWAL+W YR++NL+
Sbjct: 231 LIQVNGDVLGHSDIDSQTSSFGTFTVLSYNILADAYATSDAYSYCPTWALSWTYRRQNLM 290

Query: 337 REILGYEADILCLQE 381
           REI+GY ADI+CLQE
Sbjct: 291 REIIGYHADIICLQE 305


>ref|XP_002464631.1| hypothetical protein SORBIDRAFT_01g022180 [Sorghum bicolor]
           gi|241918485|gb|EER91629.1| hypothetical protein
           SORBIDRAFT_01g022180 [Sorghum bicolor]
          Length = 553

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/137 (48%), Positives = 88/137 (64%), Gaps = 12/137 (8%)
 Frame = +1

Query: 7   GKSWITLASSKIYTPSMDDLGCILRLDYQVIHFPSTKQSLV----SLVTDRVLGFPVPRP 174
           G++W  +   + YTP+ DD+G  L+  ++ +   S K+S +    S++T RV+  P P P
Sbjct: 172 GETWFEVGRLRTYTPTADDIGHALK--FECVAVDSEKRSPIGPPTSIMTSRVIPAPTPTP 229

Query: 175 RRMIKVNHQ--------PQDSFHAPFRVLSYNILADMYATVVKYSYCPTWALTWEYRKKN 330
           RR+I+VN           Q S    F VLSYNILAD YAT   YSYCPTWALTW YR++N
Sbjct: 230 RRLIQVNGDVLGHLDLDSQTSSLGTFTVLSYNILADAYATSDAYSYCPTWALTWTYRRQN 289

Query: 331 LLREILGYEADILCLQE 381
           LLREI+GY ADI+CLQE
Sbjct: 290 LLREIIGYHADIICLQE 306


>ref|NP_001147019.1| CCR4-NOT transcription complex subunit 6 [Zea mays]
           gi|195606510|gb|ACG25085.1| CCR4-NOT transcription
           complex subunit 6 [Zea mays]
           gi|414865007|tpg|DAA43564.1| TPA: CCR4-NOT transcription
           complex subunit 6 [Zea mays]
          Length = 620

 Score =  127 bits (319), Expect = 9e-28
 Identities = 66/136 (48%), Positives = 87/136 (63%), Gaps = 11/136 (8%)
 Frame = +1

Query: 7   GKSWITLASSKIYTPSMDDLGCILRLDYQVIHFPS--TKQSLVSLVTDRVLGFPVPRPRR 180
           G++W  +  S+ YT + DD+G +LR +  V+   +  T ++  S++T RV+  P P PRR
Sbjct: 185 GETWFEVGWSRTYTATTDDIGHVLRFECIVVDVETRGTVRAPTSVMTSRVIPAPTPTPRR 244

Query: 181 MIKVNH---------QPQDSFHAPFRVLSYNILADMYATVVKYSYCPTWALTWEYRKKNL 333
           +I VN            + S    F VLSYNILAD YAT   YSYCPTWALTW YR++NL
Sbjct: 245 LIPVNAADAMVHFDLDSRTSSFGTFTVLSYNILADTYATSDTYSYCPTWALTWAYRRQNL 304

Query: 334 LREILGYEADILCLQE 381
           LREI+GY ADI+CLQE
Sbjct: 305 LREIIGYHADIICLQE 320


>gb|EAY88687.1| hypothetical protein OsI_10162 [Oryza sativa Indica Group]
          Length = 607

 Score =  127 bits (319), Expect = 9e-28
 Identities = 66/137 (48%), Positives = 87/137 (63%), Gaps = 12/137 (8%)
 Frame = +1

Query: 7   GKSWITLASSKIYTPSMDDLGCILRLDYQVIHFPSTKQSL---VSLVTDRVLGFPVPRPR 177
           G++W  +  S+ YTP+ DD+G  LR +   +    T+ S+    S++T RV+  P P PR
Sbjct: 172 GETWFEVGRSRTYTPTADDIGHALRFECVAVD-SETRSSVGAPTSIMTSRVIPAPTPTPR 230

Query: 178 RMIKVNH---------QPQDSFHAPFRVLSYNILADMYATVVKYSYCPTWALTWEYRKKN 330
           R+I VN            ++S    F VLSYNILAD YAT   YSYCPTWAL+W YR++N
Sbjct: 231 RLIPVNSADVMGQFDLDSRNSSFGTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQN 290

Query: 331 LLREILGYEADILCLQE 381
           LLREI+GY ADI+CLQE
Sbjct: 291 LLREIIGYHADIICLQE 307