BLASTX nr result

ID: Coptis24_contig00018382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018382
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265299.1| PREDICTED: uncharacterized protein LOC100264...   146   1e-33
ref|XP_002306402.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_002884931.1| hypothetical protein ARALYDRAFT_897496 [Arab...   137   9e-31
ref|NP_187893.1| uncharacterized protein [Arabidopsis thaliana] ...   136   2e-30
ref|XP_004159170.1| PREDICTED: uncharacterized protein LOC101230...   135   4e-30

>ref|XP_002265299.1| PREDICTED: uncharacterized protein LOC100264983 [Vitis vinifera]
          Length = 202

 Score =  146 bits (369), Expect = 1e-33
 Identities = 72/84 (85%), Positives = 76/84 (90%)
 Frame = -2

Query: 374 ETHMEKLLEREKEDGMLLGKCVEELKKKGVEFDLLKEVDALRRAKSLKVEAKIVRRWSGR 195
           E+HMEKLLEREKEDG LLGKCVEELKKKGVEFDLLKEVDALRRAKSL+VEAK VR+WS R
Sbjct: 119 ESHMEKLLEREKEDGKLLGKCVEELKKKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSAR 178

Query: 194 DFVTLFFIGVSCLVLALTRVVLCN 123
           DFVT FF  VSCLVL L RV+LCN
Sbjct: 179 DFVTFFFFTVSCLVLGLVRVILCN 202


>ref|XP_002306402.1| predicted protein [Populus trichocarpa] gi|222855851|gb|EEE93398.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/84 (82%), Positives = 75/84 (89%)
 Frame = -2

Query: 374 ETHMEKLLEREKEDGMLLGKCVEELKKKGVEFDLLKEVDALRRAKSLKVEAKIVRRWSGR 195
           E H+EKLLEREKEDG LL KCVEELKKKG EFDLLKEVDALRRAKSL+VE K+VR+WS R
Sbjct: 113 ECHLEKLLEREKEDGQLLAKCVEELKKKGGEFDLLKEVDALRRAKSLRVETKVVRKWSTR 172

Query: 194 DFVTLFFIGVSCLVLALTRVVLCN 123
           DFVTLFF  VSCLVL LTR++LCN
Sbjct: 173 DFVTLFFFSVSCLVLGLTRIILCN 196


>ref|XP_002884931.1| hypothetical protein ARALYDRAFT_897496 [Arabidopsis lyrata subsp.
           lyrata] gi|297330771|gb|EFH61190.1| hypothetical protein
           ARALYDRAFT_897496 [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/84 (78%), Positives = 76/84 (90%)
 Frame = -2

Query: 374 ETHMEKLLEREKEDGMLLGKCVEELKKKGVEFDLLKEVDALRRAKSLKVEAKIVRRWSGR 195
           E+H+EKLLEREKED  LL KCVEELKKKG+EFDLLKEVDALRRAKSL+VE+K VR+WS R
Sbjct: 125 ESHLEKLLEREKEDAKLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESKPVRKWSAR 184

Query: 194 DFVTLFFIGVSCLVLALTRVVLCN 123
           DFVTLFF  VSCLVLA+ R++LC+
Sbjct: 185 DFVTLFFFSVSCLVLAMIRLILCD 208


>ref|NP_187893.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6997162|gb|AAF34826.1| hypothetical protein
           [Arabidopsis thaliana] gi|9279771|dbj|BAB01416.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|149944345|gb|ABR46215.1| At3g12870 [Arabidopsis
           thaliana] gi|332641734|gb|AEE75255.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 206

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/84 (77%), Positives = 76/84 (90%)
 Frame = -2

Query: 374 ETHMEKLLEREKEDGMLLGKCVEELKKKGVEFDLLKEVDALRRAKSLKVEAKIVRRWSGR 195
           E+H+EKLLEREKED  LL KCVEELKKKG+EFDLLKEVDALRRAKSL+VE+K V++WS R
Sbjct: 123 ESHLEKLLEREKEDAKLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESKPVKKWSAR 182

Query: 194 DFVTLFFIGVSCLVLALTRVVLCN 123
           DFVTLFF  VSCLVLA+ R++LC+
Sbjct: 183 DFVTLFFFSVSCLVLAMIRLILCD 206


>ref|XP_004159170.1| PREDICTED: uncharacterized protein LOC101230414 [Cucumis sativus]
          Length = 204

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/84 (76%), Positives = 73/84 (86%)
 Frame = -2

Query: 374 ETHMEKLLEREKEDGMLLGKCVEELKKKGVEFDLLKEVDALRRAKSLKVEAKIVRRWSGR 195
           E H+EKLLEREKED  LL KCV+ELK+KG+EFDLLKEVDALRRAKSL+VEAK VR+WS R
Sbjct: 120 EAHLEKLLEREKEDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSR 179

Query: 194 DFVTLFFIGVSCLVLALTRVVLCN 123
           DF+TLFF  VSC+ L + RVVLCN
Sbjct: 180 DFITLFFFSVSCMFLGIIRVVLCN 203


Top