BLASTX nr result

ID: Coptis24_contig00018376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018376
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554647.1| PREDICTED: cell cycle checkpoint control pro...   231   6e-59
ref|XP_003521692.1| PREDICTED: cell cycle checkpoint control pro...   228   5e-58
ref|XP_003626250.1| Cell cycle checkpoint control protein RAD9A ...   226   1e-57
ref|XP_002279397.1| PREDICTED: cell cycle checkpoint control pro...   226   1e-57
gb|ABN08029.1| Rad9 [Medicago truncatula]                             226   1e-57

>ref|XP_003554647.1| PREDICTED: cell cycle checkpoint control protein RAD9A-like
           [Glycine max]
          Length = 449

 Score =  231 bits (588), Expect = 6e-59
 Identities = 110/130 (84%), Positives = 122/130 (93%)
 Frame = +1

Query: 52  GMRKAYWLTCNVEPDIQHLSLDRRKFPSSFVVRPRDLNRLLANFQSSLQEITVIATEQNS 231
           GMRK YW+TCNVEPDIQHLSLDR+KFPS+FVV PRDL+RLLANFQSSLQEIT+IATE +S
Sbjct: 112 GMRKTYWITCNVEPDIQHLSLDRQKFPSNFVVSPRDLSRLLANFQSSLQEITIIATEPSS 171

Query: 232 MPTDASNEIGGKAVELRSYIDPTKDASETALHTQLWIDPTEEFLQYTHTGDPVDVTFAVK 411
           +P DASNEIGGKAVELRSY+DPTKD ++T LHTQLWIDP EEFLQY HTGDP+DVTF+VK
Sbjct: 172 LPLDASNEIGGKAVELRSYMDPTKD-NDTLLHTQLWIDPKEEFLQYVHTGDPIDVTFSVK 230

Query: 412 ELKAFLSFCE 441
           ELKAFLSFCE
Sbjct: 231 ELKAFLSFCE 240


>ref|XP_003521692.1| PREDICTED: cell cycle checkpoint control protein RAD9A-like isoform
           1 [Glycine max]
          Length = 449

 Score =  228 bits (580), Expect = 5e-58
 Identities = 109/130 (83%), Positives = 121/130 (93%)
 Frame = +1

Query: 52  GMRKAYWLTCNVEPDIQHLSLDRRKFPSSFVVRPRDLNRLLANFQSSLQEITVIATEQNS 231
           GMRK YW+TCNVEPDI HLSLDR+KFPS+FVVRPRDL+RLLANFQSSLQEIT+IATE +S
Sbjct: 112 GMRKTYWITCNVEPDIHHLSLDRQKFPSNFVVRPRDLSRLLANFQSSLQEITIIATEPSS 171

Query: 232 MPTDASNEIGGKAVELRSYIDPTKDASETALHTQLWIDPTEEFLQYTHTGDPVDVTFAVK 411
           + TDASNEIGGK VELRSY+DPTKD ++T LHTQLWIDP EEFLQY HTGDP+DVTF+VK
Sbjct: 172 LLTDASNEIGGKEVELRSYMDPTKD-NDTLLHTQLWIDPKEEFLQYVHTGDPIDVTFSVK 230

Query: 412 ELKAFLSFCE 441
           ELKAFLSFCE
Sbjct: 231 ELKAFLSFCE 240


>ref|XP_003626250.1| Cell cycle checkpoint control protein RAD9A [Medicago truncatula]
           gi|355501265|gb|AES82468.1| Cell cycle checkpoint
           control protein RAD9A [Medicago truncatula]
          Length = 496

 Score =  226 bits (577), Expect = 1e-57
 Identities = 109/130 (83%), Positives = 119/130 (91%)
 Frame = +1

Query: 52  GMRKAYWLTCNVEPDIQHLSLDRRKFPSSFVVRPRDLNRLLANFQSSLQEITVIATEQNS 231
           GMRK YW+TCNVEPDI HLSLDR+KFPS+FVVRPRDLNRLLANFQSSLQEIT+IATE  S
Sbjct: 112 GMRKTYWITCNVEPDITHLSLDRQKFPSNFVVRPRDLNRLLANFQSSLQEITIIATEPAS 171

Query: 232 MPTDASNEIGGKAVELRSYIDPTKDASETALHTQLWIDPTEEFLQYTHTGDPVDVTFAVK 411
           +P D+ NEIGGKAVELRSYIDPTKD +++ LHTQLWIDP EEFLQY H GDPVDVTF+VK
Sbjct: 172 VPPDSENEIGGKAVELRSYIDPTKD-NDSLLHTQLWIDPKEEFLQYVHNGDPVDVTFSVK 230

Query: 412 ELKAFLSFCE 441
           ELKAFLSFCE
Sbjct: 231 ELKAFLSFCE 240


>ref|XP_002279397.1| PREDICTED: cell cycle checkpoint control protein RAD9A [Vitis
           vinifera] gi|296089705|emb|CBI39524.3| unnamed protein
           product [Vitis vinifera]
          Length = 447

 Score =  226 bits (577), Expect = 1e-57
 Identities = 107/130 (82%), Positives = 122/130 (93%)
 Frame = +1

Query: 52  GMRKAYWLTCNVEPDIQHLSLDRRKFPSSFVVRPRDLNRLLANFQSSLQEITVIATEQNS 231
           G++KAYW+TCNVEPDIQHLSLDR +FPS+FVVRPRDLNRLLANFQSSLQEIT+IATE  S
Sbjct: 112 GVKKAYWITCNVEPDIQHLSLDRTRFPSNFVVRPRDLNRLLANFQSSLQEITIIATEPTS 171

Query: 232 MPTDASNEIGGKAVELRSYIDPTKDASETALHTQLWIDPTEEFLQYTHTGDPVDVTFAVK 411
           +P+DA+ EIGGKAVELRSYIDPTKD ++++LHTQLWIDP EEF+QY H+GDPVDVTF VK
Sbjct: 172 LPSDAAGEIGGKAVELRSYIDPTKD-NDSSLHTQLWIDPMEEFVQYVHSGDPVDVTFGVK 230

Query: 412 ELKAFLSFCE 441
           ELKAFLSFCE
Sbjct: 231 ELKAFLSFCE 240


>gb|ABN08029.1| Rad9 [Medicago truncatula]
          Length = 476

 Score =  226 bits (577), Expect = 1e-57
 Identities = 109/130 (83%), Positives = 119/130 (91%)
 Frame = +1

Query: 52  GMRKAYWLTCNVEPDIQHLSLDRRKFPSSFVVRPRDLNRLLANFQSSLQEITVIATEQNS 231
           GMRK YW+TCNVEPDI HLSLDR+KFPS+FVVRPRDLNRLLANFQSSLQEIT+IATE  S
Sbjct: 112 GMRKTYWITCNVEPDITHLSLDRQKFPSNFVVRPRDLNRLLANFQSSLQEITIIATEPAS 171

Query: 232 MPTDASNEIGGKAVELRSYIDPTKDASETALHTQLWIDPTEEFLQYTHTGDPVDVTFAVK 411
           +P D+ NEIGGKAVELRSYIDPTKD +++ LHTQLWIDP EEFLQY H GDPVDVTF+VK
Sbjct: 172 VPPDSENEIGGKAVELRSYIDPTKD-NDSLLHTQLWIDPKEEFLQYVHNGDPVDVTFSVK 230

Query: 412 ELKAFLSFCE 441
           ELKAFLSFCE
Sbjct: 231 ELKAFLSFCE 240


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