BLASTX nr result

ID: Coptis24_contig00018374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018374
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527563.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycin...    71   1e-10
ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265...    71   1e-10
ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago ...    69   4e-10

>ref|XP_002527563.1| conserved hypothetical protein [Ricinus communis]
           gi|223533055|gb|EEF34815.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/62 (62%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = -2

Query: 184 IITKCEQTNDSSELSADRNST-LKIGSAIIVVDAPKTIKTASSVPCLRVNADLVKAGDVG 8
           + TKC+    SSE S     T L IGS I+VV+APK IKTA+SVPCLRVN+ LVK GDVG
Sbjct: 35  VATKCQSQESSSETSPPAKITKLAIGSPIVVVEAPKMIKTAASVPCLRVNSGLVKPGDVG 94

Query: 7   RI 2
           RI
Sbjct: 95  RI 96


>ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|222849272|gb|EEE86819.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
 Frame = -2

Query: 220 NSVSNHGFQKSLIITKCEQTNDSSE---LSADRNSTLKIGSAIIVVDAPKTIKTASSVPC 50
           +S++N   +K  +IT+CE    SS    L A   + L IGS ++V++APK IKTA+++PC
Sbjct: 22  HSINNARNRKLNVITRCESRESSSSETNLPAKSTAKLGIGSPVVVIEAPKMIKTAATMPC 81

Query: 49  LRVNADLVKAGDVGRI 2
           LRVN   VK GDVGRI
Sbjct: 82  LRVNTGFVKPGDVGRI 97


>ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycine max]
           gi|255626895|gb|ACU13792.1| unknown [Glycine max]
          Length = 128

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/60 (58%), Positives = 47/60 (78%)
 Frame = -2

Query: 181 ITKCEQTNDSSELSADRNSTLKIGSAIIVVDAPKTIKTASSVPCLRVNADLVKAGDVGRI 2
           + +CE    SSEL  +++S L+IGS II ++APK IKTA+++PCLRVN+ LVK GDVGRI
Sbjct: 36  LIRCESKESSSELP-EKHSKLEIGSPIIFIEAPKMIKTAATMPCLRVNSGLVKPGDVGRI 94


>ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265104 [Vitis vinifera]
           gi|296084005|emb|CBI24393.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/64 (54%), Positives = 47/64 (73%)
 Frame = -2

Query: 193 KSLIITKCEQTNDSSELSADRNSTLKIGSAIIVVDAPKTIKTASSVPCLRVNADLVKAGD 14
           KS++  +     +  E S+ + S L+IGS IIV++APK +KTA+SVPCLR NA LVKAGD
Sbjct: 19  KSILERQTRVKCEFGEKSSPKTSELEIGSPIIVIEAPKVLKTAASVPCLRANAGLVKAGD 78

Query: 13  VGRI 2
           VGR+
Sbjct: 79  VGRV 82


>ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago truncatula]
           gi|355490404|gb|AES71607.1| hypothetical protein
           MTR_3g079820 [Medicago truncatula]
          Length = 128

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = -2

Query: 190 SLIITKCEQTNDSSELSA-DRNSTLKIGSAIIVVDAPKTIKTASSVPCLRVNADLVKAGD 14
           S+ + +CE  + S E    ++ S L  GS II+++APK IKTA+SVPCLRVN+ LVK GD
Sbjct: 31  SVALVRCESKDSSEENELLEKRSKLDKGSPIIIIEAPKMIKTAASVPCLRVNSGLVKPGD 90

Query: 13  VGRI 2
           VGRI
Sbjct: 91  VGRI 94


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