BLASTX nr result
ID: Coptis24_contig00018374
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018374 (233 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527563.1| conserved hypothetical protein [Ricinus comm... 74 2e-11 ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-11 ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycin... 71 1e-10 ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265... 71 1e-10 ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago ... 69 4e-10 >ref|XP_002527563.1| conserved hypothetical protein [Ricinus communis] gi|223533055|gb|EEF34815.1| conserved hypothetical protein [Ricinus communis] Length = 128 Score = 73.6 bits (179), Expect = 2e-11 Identities = 39/62 (62%), Positives = 45/62 (72%), Gaps = 1/62 (1%) Frame = -2 Query: 184 IITKCEQTNDSSELSADRNST-LKIGSAIIVVDAPKTIKTASSVPCLRVNADLVKAGDVG 8 + TKC+ SSE S T L IGS I+VV+APK IKTA+SVPCLRVN+ LVK GDVG Sbjct: 35 VATKCQSQESSSETSPPAKITKLAIGSPIVVVEAPKMIKTAASVPCLRVNSGLVKPGDVG 94 Query: 7 RI 2 RI Sbjct: 95 RI 96 >ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|222849272|gb|EEE86819.1| predicted protein [Populus trichocarpa] Length = 129 Score = 71.6 bits (174), Expect = 6e-11 Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 3/76 (3%) Frame = -2 Query: 220 NSVSNHGFQKSLIITKCEQTNDSSE---LSADRNSTLKIGSAIIVVDAPKTIKTASSVPC 50 +S++N +K +IT+CE SS L A + L IGS ++V++APK IKTA+++PC Sbjct: 22 HSINNARNRKLNVITRCESRESSSSETNLPAKSTAKLGIGSPVVVIEAPKMIKTAATMPC 81 Query: 49 LRVNADLVKAGDVGRI 2 LRVN VK GDVGRI Sbjct: 82 LRVNTGFVKPGDVGRI 97 >ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycine max] gi|255626895|gb|ACU13792.1| unknown [Glycine max] Length = 128 Score = 70.9 bits (172), Expect = 1e-10 Identities = 35/60 (58%), Positives = 47/60 (78%) Frame = -2 Query: 181 ITKCEQTNDSSELSADRNSTLKIGSAIIVVDAPKTIKTASSVPCLRVNADLVKAGDVGRI 2 + +CE SSEL +++S L+IGS II ++APK IKTA+++PCLRVN+ LVK GDVGRI Sbjct: 36 LIRCESKESSSELP-EKHSKLEIGSPIIFIEAPKMIKTAATMPCLRVNSGLVKPGDVGRI 94 >ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265104 [Vitis vinifera] gi|296084005|emb|CBI24393.3| unnamed protein product [Vitis vinifera] Length = 113 Score = 70.9 bits (172), Expect = 1e-10 Identities = 35/64 (54%), Positives = 47/64 (73%) Frame = -2 Query: 193 KSLIITKCEQTNDSSELSADRNSTLKIGSAIIVVDAPKTIKTASSVPCLRVNADLVKAGD 14 KS++ + + E S+ + S L+IGS IIV++APK +KTA+SVPCLR NA LVKAGD Sbjct: 19 KSILERQTRVKCEFGEKSSPKTSELEIGSPIIVIEAPKVLKTAASVPCLRANAGLVKAGD 78 Query: 13 VGRI 2 VGR+ Sbjct: 79 VGRV 82 >ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago truncatula] gi|355490404|gb|AES71607.1| hypothetical protein MTR_3g079820 [Medicago truncatula] Length = 128 Score = 68.9 bits (167), Expect = 4e-10 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Frame = -2 Query: 190 SLIITKCEQTNDSSELSA-DRNSTLKIGSAIIVVDAPKTIKTASSVPCLRVNADLVKAGD 14 S+ + +CE + S E ++ S L GS II+++APK IKTA+SVPCLRVN+ LVK GD Sbjct: 31 SVALVRCESKDSSEENELLEKRSKLDKGSPIIIIEAPKMIKTAASVPCLRVNSGLVKPGD 90 Query: 13 VGRI 2 VGRI Sbjct: 91 VGRI 94