BLASTX nr result

ID: Coptis24_contig00018373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018373
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002527563.1| conserved hypothetical protein [Ricinus comm...    72   4e-11
ref|XP_004142251.1| PREDICTED: uncharacterized protein LOC101219...    68   9e-10
ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycin...    68   9e-10
ref|XP_004162023.1| PREDICTED: uncharacterized LOC101219406 [Cuc...    66   3e-09

>ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|222849272|gb|EEE86819.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
 Frame = -2

Query: 389 TSTNSGSNVTLPSSKFPTNSVSNRGFQKSFIITKCEQTNDSSE---LSADQNSTLKIGSA 219
           TST   +N TL S+    +S++N   +K  +IT+CE    SS    L A   + L IGS 
Sbjct: 8   TSTIPRTNPTLQSN----HSINNARNRKLNVITRCESRESSSSETNLPAKSTAKLGIGSP 63

Query: 218 IIVVDAPKTIKIAASVPCLRVNTDLVKTGDVGR 120
           ++V++APK IK AA++PCLRVNT  VK GDVGR
Sbjct: 64  VVVIEAPKMIKTAATMPCLRVNTGFVKPGDVGR 96


>ref|XP_002527563.1| conserved hypothetical protein [Ricinus communis]
           gi|223533055|gb|EEF34815.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/93 (48%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = -2

Query: 395 TPTSTNSGSNVTLPSSKFPTNSVSNRGFQKSFIITKCEQTNDSSELSADQNST-LKIGSA 219
           TPTST   + +     +F   +     F    + TKC+    SSE S     T L IGS 
Sbjct: 6   TPTSTIPYTKLHNSILQFTNANFRTPSFS---VATKCQSQESSSETSPPAKITKLAIGSP 62

Query: 218 IIVVDAPKTIKIAASVPCLRVNTDLVKTGDVGR 120
           I+VV+APK IK AASVPCLRVN+ LVK GDVGR
Sbjct: 63  IVVVEAPKMIKTAASVPCLRVNSGLVKPGDVGR 95


>ref|XP_004142251.1| PREDICTED: uncharacterized protein LOC101219406 [Cucumis sativus]
          Length = 133

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
 Frame = -2

Query: 410 YISCHTPTSTNSGSNVTLPSSKFPTNSVSNRGFQKSFIITKCEQTNDSSE--LSADQNST 237
           Y+   TP S  +   +T  SS   +N+++ R   +S  I KCE +   ++   S  ++  
Sbjct: 4   YLPPTTPFSRPNIRILTSISSFNVSNTLTTRSQPRS--IVKCESSASPADGQTSPPKSQK 61

Query: 236 LKIGSAIIVVDAPKTIKIAASVPCLRVNTDLVKTGDVGR 120
           L+IGS +IV++APK IK AASVPCLRVN+ ++  GDVGR
Sbjct: 62  LEIGSPVIVIEAPKMIKTAASVPCLRVNSGIINPGDVGR 100


>ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycine max]
           gi|255626895|gb|ACU13792.1| unknown [Glycine max]
          Length = 128

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/59 (57%), Positives = 45/59 (76%)
 Frame = -2

Query: 296 ITKCEQTNDSSELSADQNSTLKIGSAIIVVDAPKTIKIAASVPCLRVNTDLVKTGDVGR 120
           + +CE    SSEL  +++S L+IGS II ++APK IK AA++PCLRVN+ LVK GDVGR
Sbjct: 36  LIRCESKESSSELP-EKHSKLEIGSPIIFIEAPKMIKTAATMPCLRVNSGLVKPGDVGR 93


>ref|XP_004162023.1| PREDICTED: uncharacterized LOC101219406 [Cucumis sativus]
          Length = 133

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = -2

Query: 410 YISCHTPTSTNSGSNVTLPSSKFPTNSVSNRGFQKSFIITKCEQTNDSSE--LSADQNST 237
           Y+   TP S  +   +T  SS   +N+++ R   +S  I KCE +   ++      ++  
Sbjct: 4   YLPPTTPFSRPNIRILTSISSFNVSNTLTTRSQPRS--IVKCESSASPADGQTPPPKSQK 61

Query: 236 LKIGSAIIVVDAPKTIKIAASVPCLRVNTDLVKTGDVGR 120
           L+IGS +IV++APK IK AASVPCLRVN+ ++  GDVGR
Sbjct: 62  LEIGSPVIVIEAPKMIKTAASVPCLRVNSGIINPGDVGR 100


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