BLASTX nr result

ID: Coptis24_contig00018372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018372
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632356.1| PREDICTED: uncharacterized protein LOC100854...    93   3e-17
emb|CAN77097.1| hypothetical protein VITISV_002769 [Vitis vinifera]    91   1e-16
ref|XP_002306767.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002520763.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
gb|AAA63414.1| outer envelope membrane protein [Pisum sativum]         70   1e-10

>ref|XP_003632356.1| PREDICTED: uncharacterized protein LOC100854564 [Vitis vinifera]
          Length = 70

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/70 (65%), Positives = 53/70 (75%)
 Frame = -3

Query: 418 MGSSAKVNSFKSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPTRDPDDNEDGVNF 239
           MG S +    KS +VV GALAFGWL IE+A KPFL+KAR A+DKSDPTRDPDD+EDG   
Sbjct: 1   MGKSTEAGPLKSVMVVFGALAFGWLAIELAFKPFLDKARSALDKSDPTRDPDDDEDGGT- 59

Query: 238 GTNKSSSDED 209
            T KS SDE+
Sbjct: 60  -TQKSLSDEE 68


>emb|CAN77097.1| hypothetical protein VITISV_002769 [Vitis vinifera]
          Length = 70

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/70 (62%), Positives = 52/70 (74%)
 Frame = -3

Query: 418 MGSSAKVNSFKSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPTRDPDDNEDGVNF 239
           MG S +    KS +VV GALAFGWL IE+A KPFL+KAR A+DKSDPTRDPDD+EDG   
Sbjct: 1   MGKSTEAGPLKSVMVVFGALAFGWLAIELAFKPFLDKARSALDKSDPTRDPDDDEDG--- 57

Query: 238 GTNKSSSDED 209
           GT + S  +D
Sbjct: 58  GTTQRSLSDD 67


>ref|XP_002306767.1| predicted protein [Populus trichocarpa] gi|222856216|gb|EEE93763.1|
           predicted protein [Populus trichocarpa]
          Length = 77

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/49 (69%), Positives = 39/49 (79%)
 Frame = -3

Query: 388 KSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPTRDPDDNEDGVN 242
           K A VV GALAFGWL IE+A KPFL+KAR AMDKSDP RDPD ++D  +
Sbjct: 7   KQAAVVFGALAFGWLAIEMAFKPFLDKARSAMDKSDPARDPDGDDDSAD 55


>ref|XP_002520763.1| conserved hypothetical protein [Ricinus communis]
           gi|223540148|gb|EEF41725.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = -3

Query: 388 KSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPTRDPDDN 257
           K A+VV+GALAFGWL IE+A KPFL+KAR AMDKSDP RDPDD+
Sbjct: 7   KQAMVVVGALAFGWLAIEMAFKPFLDKARAAMDKSDPERDPDDS 50


>gb|AAA63414.1| outer envelope membrane protein [Pisum sativum]
          Length = 65

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/60 (58%), Positives = 42/60 (70%)
 Frame = -3

Query: 388 KSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPTRDPDDNEDGVNFGTNKSSSDED 209
           K AVVV GALAF WL IE+A KPFL + RD++DKSDPTRDPDD        T+   +D+D
Sbjct: 5   KEAVVVAGALAFVWLAIELAFKPFLSQTRDSIDKSDPTRDPDDAPPPPPPETDAGDADKD 64


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