BLASTX nr result

ID: Coptis24_contig00018356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018356
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis v...   306   4e-81
gb|AAU00158.1| root-specific metal transporter [Malus baccata]        288   8e-76
ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|2...   288   1e-75
ref|NP_001234318.1| root-specific metal transporter [Solanum lyc...   287   2e-75
ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|2...   279   4e-73

>ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera]
           gi|302141782|emb|CBI18985.3| unnamed protein product
           [Vitis vinifera]
          Length = 542

 Score =  306 bits (783), Expect = 4e-81
 Identities = 155/212 (73%), Positives = 170/212 (80%), Gaps = 3/212 (1%)
 Frame = -1

Query: 729 AIALLASGQSSTITGTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXX 550
           AIAL ASGQSSTITGTYAGQ+IMQGFLD+KM+ W+RNLMTR IAITP             
Sbjct: 331 AIALFASGQSSTITGTYAGQFIMQGFLDIKMRKWLRNLMTRSIAITPSLIVSIIGGSAGA 390

Query: 549 XXXXXXXSMILSFELPFALIPLLKFSSGATKMGPYKNSIYVIVISWILGFLIIGINIYYL 370
                  SMILSFELPFALIPLLKFSS  TKMGP+KNSIY+IVISWILGF IIGINIYYL
Sbjct: 391 GRLIIIASMILSFELPFALIPLLKFSSSNTKMGPHKNSIYIIVISWILGFGIIGINIYYL 450

Query: 369 STGFIDWLIHNNLPKVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQ 190
           ST F+ WL+HNNLPKV NVFIGIIVFP+M+IYILSVIYLT RKD +VT+I+P K DPN Q
Sbjct: 451 STSFVGWLLHNNLPKVGNVFIGIIVFPLMAIYILSVIYLTTRKDTVVTFIEPEKNDPNVQ 510

Query: 189 NKMENGIDSADGV---DHVPYRDDLADIPLPR 103
           N MENG D  DGV    HVPYR+DLADIPLP+
Sbjct: 511 NHMENGFDQTDGVFELGHVPYREDLADIPLPK 542


>gb|AAU00158.1| root-specific metal transporter [Malus baccata]
          Length = 551

 Score =  288 bits (737), Expect = 8e-76
 Identities = 142/209 (67%), Positives = 170/209 (81%)
 Frame = -1

Query: 729 AIALLASGQSSTITGTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXX 550
           AIALLASGQSSTITGTYAGQ++MQGFLD+KMK W RNLMTRCIAITP             
Sbjct: 344 AIALLASGQSSTITGTYAGQFVMQGFLDIKMKKWARNLMTRCIAITPSLIVSIIGGSSGA 403

Query: 549 XXXXXXXSMILSFELPFALIPLLKFSSGATKMGPYKNSIYVIVISWILGFLIIGINIYYL 370
                  SMILSFELPFALIPLLKFS  ATKMGP+KNSIY+IVISWI+G  IIGINIYYL
Sbjct: 404 GRLIIIASMILSFELPFALIPLLKFSGSATKMGPHKNSIYIIVISWIIGMAIIGINIYYL 463

Query: 369 STGFIDWLIHNNLPKVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQ 190
           STGF+ W+IH++LPKVA VFIGI+VFP+M+IYIL+V+YL +RKD +VT+++P+K DP AQ
Sbjct: 464 STGFVGWIIHSSLPKVATVFIGILVFPIMAIYILAVLYLALRKDSVVTFVEPTKNDPAAQ 523

Query: 189 NKMENGIDSADGVDHVPYRDDLADIPLPR 103
           N+MENG+ +  G   VP+R+DLAD+ LP+
Sbjct: 524 NQMENGLPNY-GEPPVPFREDLADVSLPQ 551


>ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|222856902|gb|EEE94449.1|
           nramp transporter [Populus trichocarpa]
          Length = 518

 Score =  288 bits (736), Expect = 1e-75
 Identities = 148/211 (70%), Positives = 168/211 (79%), Gaps = 3/211 (1%)
 Frame = -1

Query: 729 AIALLASGQSSTITGTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXX 550
           AIALLASGQSSTITGTYAGQYIMQGFL+LKM+ W+RNL+TRCIAI P             
Sbjct: 307 AIALLASGQSSTITGTYAGQYIMQGFLELKMRKWIRNLVTRCIAIAPSLVVSIIGGSSGA 366

Query: 549 XXXXXXXSMILSFELPFALIPLLKFSSGATKMGPYKNSIYVIVISWILGFLIIGINIYYL 370
                  SMILSFELPFALIPLLKFSS  TKMGP+KNSIY+IVISWILG  IIG+NIYYL
Sbjct: 367 GRLIIIASMILSFELPFALIPLLKFSSSTTKMGPHKNSIYIIVISWILGLGIIGVNIYYL 426

Query: 369 STGFIDWLIHNNLPKVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQ 190
           STGF+ WLI NNLPKV NVFIGIIVFP+M+IYIL+VIYLT RKD +VT++ P+K DP  Q
Sbjct: 427 STGFVGWLIDNNLPKVGNVFIGIIVFPLMAIYILAVIYLTFRKDSVVTFLGPNKNDPQQQ 486

Query: 189 NKMENGI-DSADG--VDHVPYRDDLADIPLP 106
             MENG+  S +G  ++ VPYR+DLADIPLP
Sbjct: 487 ANMENGLTKSTEGPEMERVPYREDLADIPLP 517


>ref|NP_001234318.1| root-specific metal transporter [Solanum lycopersicum]
           gi|30267434|gb|AAP21818.1| root-specific metal
           transporter [Solanum lycopersicum]
          Length = 530

 Score =  287 bits (734), Expect = 2e-75
 Identities = 150/209 (71%), Positives = 166/209 (79%)
 Frame = -1

Query: 729 AIALLASGQSSTITGTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXX 550
           AIALLASGQSSTITGTYAGQ+IMQGFLDLKMKTW+RNL TR IAITP             
Sbjct: 327 AIALLASGQSSTITGTYAGQFIMQGFLDLKMKTWLRNLFTRLIAITPSLVVSIIGGSSGA 386

Query: 549 XXXXXXXSMILSFELPFALIPLLKFSSGATKMGPYKNSIYVIVISWILGFLIIGINIYYL 370
                  SMILSFELPFALIPLLKFSS +TK+GP+KNSIY+IVISWILG  IIGINIYYL
Sbjct: 387 GRLIIIASMILSFELPFALIPLLKFSSSSTKLGPHKNSIYIIVISWILGLGIIGINIYYL 446

Query: 369 STGFIDWLIHNNLPKVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQ 190
           ST F+ WLI NNLPKV NV IGI+VFP+M+IYIL+VIYL  RKDK+VTYIDP K D    
Sbjct: 447 STAFVGWLISNNLPKVGNVLIGIVVFPLMAIYILAVIYLMFRKDKVVTYIDPIKDD---- 502

Query: 189 NKMENGIDSADGVDHVPYRDDLADIPLPR 103
             MENGI+S + VD VPYR+DLADIPLP+
Sbjct: 503 -HMENGINSMELVDRVPYREDLADIPLPQ 530


>ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|222856903|gb|EEE94450.1|
            nramp transporter [Populus trichocarpa]
          Length = 585

 Score =  279 bits (714), Expect = 4e-73
 Identities = 148/214 (69%), Positives = 166/214 (77%), Gaps = 6/214 (2%)
 Frame = -1

Query: 729  AIALLASGQSSTITGTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXX 550
            AIALLASGQSSTITGTYAGQYIMQGFL+LKM+ W+RNL+TRCIAI P             
Sbjct: 371  AIALLASGQSSTITGTYAGQYIMQGFLELKMRKWIRNLVTRCIAIAPSLVVSIIGGSSGA 430

Query: 549  XXXXXXXS---MILSFELPFALIPLLKFSSGATKMGPYKNSIYVIVISWILGFLIIGINI 379
                   S   MILSFELPFALIPLLKFSS  TKMGP+KNSIY+IVISWILG  IIGINI
Sbjct: 431  GRLIIIASVLQMILSFELPFALIPLLKFSSSTTKMGPHKNSIYIIVISWILGLGIIGINI 490

Query: 378  YYLSTGFIDWLIHNNLPKVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDP 199
            YYLSTGF+ WLI NNLPKV NVFI IIVFP+M+IYIL+VIYLT RKD +VT++ P+K DP
Sbjct: 491  YYLSTGFVGWLIDNNLPKVGNVFIAIIVFPLMAIYILAVIYLTFRKDSVVTFLGPNKNDP 550

Query: 198  NAQNKMENGI-DSADG--VDHVPYRDDLADIPLP 106
              Q  MENG+  S +G  ++ VPYR DLADIPLP
Sbjct: 551  QQQANMENGLTKSTEGPEMERVPYRGDLADIPLP 584