BLASTX nr result
ID: Coptis24_contig00018356
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018356 (729 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis v... 306 4e-81 gb|AAU00158.1| root-specific metal transporter [Malus baccata] 288 8e-76 ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|2... 288 1e-75 ref|NP_001234318.1| root-specific metal transporter [Solanum lyc... 287 2e-75 ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|2... 279 4e-73 >ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera] gi|302141782|emb|CBI18985.3| unnamed protein product [Vitis vinifera] Length = 542 Score = 306 bits (783), Expect = 4e-81 Identities = 155/212 (73%), Positives = 170/212 (80%), Gaps = 3/212 (1%) Frame = -1 Query: 729 AIALLASGQSSTITGTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXX 550 AIAL ASGQSSTITGTYAGQ+IMQGFLD+KM+ W+RNLMTR IAITP Sbjct: 331 AIALFASGQSSTITGTYAGQFIMQGFLDIKMRKWLRNLMTRSIAITPSLIVSIIGGSAGA 390 Query: 549 XXXXXXXSMILSFELPFALIPLLKFSSGATKMGPYKNSIYVIVISWILGFLIIGINIYYL 370 SMILSFELPFALIPLLKFSS TKMGP+KNSIY+IVISWILGF IIGINIYYL Sbjct: 391 GRLIIIASMILSFELPFALIPLLKFSSSNTKMGPHKNSIYIIVISWILGFGIIGINIYYL 450 Query: 369 STGFIDWLIHNNLPKVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQ 190 ST F+ WL+HNNLPKV NVFIGIIVFP+M+IYILSVIYLT RKD +VT+I+P K DPN Q Sbjct: 451 STSFVGWLLHNNLPKVGNVFIGIIVFPLMAIYILSVIYLTTRKDTVVTFIEPEKNDPNVQ 510 Query: 189 NKMENGIDSADGV---DHVPYRDDLADIPLPR 103 N MENG D DGV HVPYR+DLADIPLP+ Sbjct: 511 NHMENGFDQTDGVFELGHVPYREDLADIPLPK 542 >gb|AAU00158.1| root-specific metal transporter [Malus baccata] Length = 551 Score = 288 bits (737), Expect = 8e-76 Identities = 142/209 (67%), Positives = 170/209 (81%) Frame = -1 Query: 729 AIALLASGQSSTITGTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXX 550 AIALLASGQSSTITGTYAGQ++MQGFLD+KMK W RNLMTRCIAITP Sbjct: 344 AIALLASGQSSTITGTYAGQFVMQGFLDIKMKKWARNLMTRCIAITPSLIVSIIGGSSGA 403 Query: 549 XXXXXXXSMILSFELPFALIPLLKFSSGATKMGPYKNSIYVIVISWILGFLIIGINIYYL 370 SMILSFELPFALIPLLKFS ATKMGP+KNSIY+IVISWI+G IIGINIYYL Sbjct: 404 GRLIIIASMILSFELPFALIPLLKFSGSATKMGPHKNSIYIIVISWIIGMAIIGINIYYL 463 Query: 369 STGFIDWLIHNNLPKVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQ 190 STGF+ W+IH++LPKVA VFIGI+VFP+M+IYIL+V+YL +RKD +VT+++P+K DP AQ Sbjct: 464 STGFVGWIIHSSLPKVATVFIGILVFPIMAIYILAVLYLALRKDSVVTFVEPTKNDPAAQ 523 Query: 189 NKMENGIDSADGVDHVPYRDDLADIPLPR 103 N+MENG+ + G VP+R+DLAD+ LP+ Sbjct: 524 NQMENGLPNY-GEPPVPFREDLADVSLPQ 551 >ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|222856902|gb|EEE94449.1| nramp transporter [Populus trichocarpa] Length = 518 Score = 288 bits (736), Expect = 1e-75 Identities = 148/211 (70%), Positives = 168/211 (79%), Gaps = 3/211 (1%) Frame = -1 Query: 729 AIALLASGQSSTITGTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXX 550 AIALLASGQSSTITGTYAGQYIMQGFL+LKM+ W+RNL+TRCIAI P Sbjct: 307 AIALLASGQSSTITGTYAGQYIMQGFLELKMRKWIRNLVTRCIAIAPSLVVSIIGGSSGA 366 Query: 549 XXXXXXXSMILSFELPFALIPLLKFSSGATKMGPYKNSIYVIVISWILGFLIIGINIYYL 370 SMILSFELPFALIPLLKFSS TKMGP+KNSIY+IVISWILG IIG+NIYYL Sbjct: 367 GRLIIIASMILSFELPFALIPLLKFSSSTTKMGPHKNSIYIIVISWILGLGIIGVNIYYL 426 Query: 369 STGFIDWLIHNNLPKVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQ 190 STGF+ WLI NNLPKV NVFIGIIVFP+M+IYIL+VIYLT RKD +VT++ P+K DP Q Sbjct: 427 STGFVGWLIDNNLPKVGNVFIGIIVFPLMAIYILAVIYLTFRKDSVVTFLGPNKNDPQQQ 486 Query: 189 NKMENGI-DSADG--VDHVPYRDDLADIPLP 106 MENG+ S +G ++ VPYR+DLADIPLP Sbjct: 487 ANMENGLTKSTEGPEMERVPYREDLADIPLP 517 >ref|NP_001234318.1| root-specific metal transporter [Solanum lycopersicum] gi|30267434|gb|AAP21818.1| root-specific metal transporter [Solanum lycopersicum] Length = 530 Score = 287 bits (734), Expect = 2e-75 Identities = 150/209 (71%), Positives = 166/209 (79%) Frame = -1 Query: 729 AIALLASGQSSTITGTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXX 550 AIALLASGQSSTITGTYAGQ+IMQGFLDLKMKTW+RNL TR IAITP Sbjct: 327 AIALLASGQSSTITGTYAGQFIMQGFLDLKMKTWLRNLFTRLIAITPSLVVSIIGGSSGA 386 Query: 549 XXXXXXXSMILSFELPFALIPLLKFSSGATKMGPYKNSIYVIVISWILGFLIIGINIYYL 370 SMILSFELPFALIPLLKFSS +TK+GP+KNSIY+IVISWILG IIGINIYYL Sbjct: 387 GRLIIIASMILSFELPFALIPLLKFSSSSTKLGPHKNSIYIIVISWILGLGIIGINIYYL 446 Query: 369 STGFIDWLIHNNLPKVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQ 190 ST F+ WLI NNLPKV NV IGI+VFP+M+IYIL+VIYL RKDK+VTYIDP K D Sbjct: 447 STAFVGWLISNNLPKVGNVLIGIVVFPLMAIYILAVIYLMFRKDKVVTYIDPIKDD---- 502 Query: 189 NKMENGIDSADGVDHVPYRDDLADIPLPR 103 MENGI+S + VD VPYR+DLADIPLP+ Sbjct: 503 -HMENGINSMELVDRVPYREDLADIPLPQ 530 >ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|222856903|gb|EEE94450.1| nramp transporter [Populus trichocarpa] Length = 585 Score = 279 bits (714), Expect = 4e-73 Identities = 148/214 (69%), Positives = 166/214 (77%), Gaps = 6/214 (2%) Frame = -1 Query: 729 AIALLASGQSSTITGTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXX 550 AIALLASGQSSTITGTYAGQYIMQGFL+LKM+ W+RNL+TRCIAI P Sbjct: 371 AIALLASGQSSTITGTYAGQYIMQGFLELKMRKWIRNLVTRCIAIAPSLVVSIIGGSSGA 430 Query: 549 XXXXXXXS---MILSFELPFALIPLLKFSSGATKMGPYKNSIYVIVISWILGFLIIGINI 379 S MILSFELPFALIPLLKFSS TKMGP+KNSIY+IVISWILG IIGINI Sbjct: 431 GRLIIIASVLQMILSFELPFALIPLLKFSSSTTKMGPHKNSIYIIVISWILGLGIIGINI 490 Query: 378 YYLSTGFIDWLIHNNLPKVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDP 199 YYLSTGF+ WLI NNLPKV NVFI IIVFP+M+IYIL+VIYLT RKD +VT++ P+K DP Sbjct: 491 YYLSTGFVGWLIDNNLPKVGNVFIAIIVFPLMAIYILAVIYLTFRKDSVVTFLGPNKNDP 550 Query: 198 NAQNKMENGI-DSADG--VDHVPYRDDLADIPLP 106 Q MENG+ S +G ++ VPYR DLADIPLP Sbjct: 551 QQQANMENGLTKSTEGPEMERVPYRGDLADIPLP 584