BLASTX nr result

ID: Coptis24_contig00018344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018344
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277692.1| PREDICTED: cytochrome c [Vitis vinifera] gi|...   222   4e-56
ref|XP_004146423.1| PREDICTED: cytochrome c-like [Cucumis sativus]    221   8e-56
sp|P00052.1|CYC_PHAAU RecName: Full=Cytochrome c                      220   2e-55
sp|P62772.1|CYC_BRANA RecName: Full=Cytochrome c gi|51317000|sp|...   219   3e-55
ref|XP_003568426.1| PREDICTED: cytochrome c-like [Brachypodium d...   219   3e-55

>ref|XP_002277692.1| PREDICTED: cytochrome c [Vitis vinifera]
           gi|183393002|gb|ACC61674.1| mitochondrial cytochrome c
           [Vitis vinifera] gi|297741010|emb|CBI31322.3| unnamed
           protein product [Vitis vinifera]
          Length = 112

 Score =  222 bits (566), Expect = 4e-56
 Identities = 104/112 (92%), Positives = 107/112 (95%)
 Frame = -3

Query: 649 MASFDEAPPGNPTTGAKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 470
           MASFDEAPPGNP  G KIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAA
Sbjct: 1   MASFDEAPPGNPAAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 469 NKNMAVQWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLISYLKESTA 314
           NKNMAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLI+YLK++TA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQATA 112


>ref|XP_004146423.1| PREDICTED: cytochrome c-like [Cucumis sativus]
          Length = 114

 Score =  221 bits (564), Expect = 8e-56
 Identities = 105/111 (94%), Positives = 106/111 (95%)
 Frame = -3

Query: 649 MASFDEAPPGNPTTGAKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 470
           MASFDEAPPGN  TG KIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAA
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 469 NKNMAVQWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLISYLKEST 317
           NKNMAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLI+YLKEST
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 111


>sp|P00052.1|CYC_PHAAU RecName: Full=Cytochrome c
          Length = 111

 Score =  220 bits (560), Expect = 2e-55
 Identities = 104/111 (93%), Positives = 106/111 (95%)
 Frame = -3

Query: 646 ASFDEAPPGNPTTGAKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 467
           ASFDEAPPGN  +G KIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYS AN
Sbjct: 1   ASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSTAN 60

Query: 466 KNMAVQWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLISYLKESTA 314
           KNMAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLI+YLKESTA
Sbjct: 61  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 111


>sp|P62772.1|CYC_BRANA RecName: Full=Cytochrome c gi|51317000|sp|P62773.1|CYC_BRAOL
           RecName: Full=Cytochrome c gi|229347|prf||711058A
           cytochrome c
          Length = 111

 Score =  219 bits (559), Expect = 3e-55
 Identities = 103/111 (92%), Positives = 106/111 (95%)
 Frame = -3

Query: 646 ASFDEAPPGNPTTGAKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 467
           ASFDEAPPGN   G KIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 60

Query: 466 KNMAVQWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLISYLKESTA 314
           KN AV+WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLI+YLKE+TA
Sbjct: 61  KNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111


>ref|XP_003568426.1| PREDICTED: cytochrome c-like [Brachypodium distachyon]
          Length = 113

 Score =  219 bits (559), Expect = 3e-55
 Identities = 103/112 (91%), Positives = 106/112 (94%)
 Frame = -3

Query: 649 MASFDEAPPGNPTTGAKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 470
           MASF EAPPGNP  G KIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYS+A
Sbjct: 1   MASFSEAPPGNPKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSSA 60

Query: 469 NKNMAVQWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLISYLKESTA 314
           NKNMAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLISYLKE+T+
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLISYLKEATS 112


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