BLASTX nr result
ID: Coptis24_contig00018338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00018338
(974 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266572.2| PREDICTED: uncharacterized protein LOC100267... 316 6e-84
emb|CBI15293.3| unnamed protein product [Vitis vinifera] 316 6e-84
ref|XP_003550768.1| PREDICTED: uncharacterized protein LOC100802... 258 1e-66
ref|XP_003622400.1| RING finger and CHY zinc finger domain-conta... 258 2e-66
ref|XP_002511501.1| zinc finger protein, putative [Ricinus commu... 254 3e-65
>ref|XP_002266572.2| PREDICTED: uncharacterized protein LOC100267228 [Vitis vinifera]
Length = 1288
Score = 316 bits (809), Expect = 6e-84
Identities = 164/306 (53%), Positives = 216/306 (70%), Gaps = 1/306 (0%)
Frame = +2
Query: 56 LLDAPILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGE-ILDIRNRFEFLKLVYRYH 232
L DAPILLFV FHKA AEL E+ R +++S + +G +++IR RFEFLKL Y+YH
Sbjct: 42 LRDAPILLFVFFHKALRAELAELRRLAAAESGCRGGSSNGNLVVEIRRRFEFLKLFYKYH 101
Query: 233 CAAEDEIVFRALDVHVSNVACTYSLEHRGIDDLFDSVFQCLILLLDNDGNSSMHYQELVY 412
AAEDE++F ALDVH+ NVA TYSLEH+ IDDLF S+F CL +L++ D N++ +QELV
Sbjct: 102 SAAEDEVIFLALDVHIKNVAHTYSLEHKSIDDLFSSIFHCLDVLMEGDANTAKPFQELVL 161
Query: 413 TTATLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIILLENILPWMTSYL 592
+T+Q TI HMLKEEEQVFPLL++QFS +EQASLVWQF CSVP++LLE+ LPWMTS+L
Sbjct: 162 LISTIQTTICHHMLKEEEQVFPLLMKQFSPQEQASLVWQFMCSVPVLLLEDFLPWMTSFL 221
Query: 593 PKDEQADVLHCIKEVVPKEELLQGVLESWLGRQTSLIGLSSTQNKAAMSSDESFYLKKFQ 772
+EQ +V++CIKEVVP+E+LL+ V+ SWLG G + + A S + LK
Sbjct: 222 SPEEQVNVVNCIKEVVPEEKLLEEVVISWLGNNNQPFGSPTRIGEEAQSVGPA-NLKDAL 280
Query: 773 KIYSWASSDKKNCIQGELDSLHDIAKYHPVDTLHLWHASAQKDFKGVLEDLYEISNSEVF 952
K+YS S + E+ L +PVD LHLWH + +KD KG+LE+LY+I +S+ F
Sbjct: 281 KVYSSKSFSTEIRQWKEVFGLKTNVGQNPVDGLHLWHGAIRKDLKGILEELYQIRSSDSF 340
Query: 953 SNLASV 970
S LASV
Sbjct: 341 STLASV 346
Score = 66.2 bits (160), Expect = 1e-08
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Frame = +2
Query: 68 PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGEILDIRNRFEFLKLVYRYHCAAED 247
P+ L FHKA +L + + + +TG+ + D RF ++ +Y+ H AED
Sbjct: 636 PVDLIFFFHKALKKDLEFL---VFGSAKLAENTGY--LADFHRRFRLIRFLYQIHSDAED 690
Query: 248 EIVFRALDVHVS--NVACTYSLEHRGIDDLFDSVFQCLILLLDNDGN-----SSMHYQEL 406
EI F AL+ N++ +Y+++H+ L F L +LD S +H+ ++
Sbjct: 691 EIAFPALEAKGKGQNISHSYTIDHK----LEVEHFNKLSFILDEMSKLHISVSGVHFDKM 746
Query: 407 VYTTA--------------TLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSV 544
+LQ + H+ EE +++PL + FS KEQ ++ +
Sbjct: 747 DQRMLKYHQLCMKLHDMCQSLQKILCDHVNHEEIELWPLFRECFSNKEQEKIIGSILGRM 806
Query: 545 PIILLENILPWMTSYLPKDEQADVLHCIKEVVPKEELLQGVLESWLG 685
+L+ I+PW+ + L EQ ++ ++ + E WLG
Sbjct: 807 RAEILQEIIPWLMASLTPKEQHAMMSLWRKATKNT-----MFEEWLG 848
>emb|CBI15293.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 316 bits (809), Expect = 6e-84
Identities = 164/306 (53%), Positives = 216/306 (70%), Gaps = 1/306 (0%)
Frame = +2
Query: 56 LLDAPILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGE-ILDIRNRFEFLKLVYRYH 232
L DAPILLFV FHKA AEL E+ R +++S + +G +++IR RFEFLKL Y+YH
Sbjct: 42 LRDAPILLFVFFHKALRAELAELRRLAAAESGCRGGSSNGNLVVEIRRRFEFLKLFYKYH 101
Query: 233 CAAEDEIVFRALDVHVSNVACTYSLEHRGIDDLFDSVFQCLILLLDNDGNSSMHYQELVY 412
AAEDE++F ALDVH+ NVA TYSLEH+ IDDLF S+F CL +L++ D N++ +QELV
Sbjct: 102 SAAEDEVIFLALDVHIKNVAHTYSLEHKSIDDLFSSIFHCLDVLMEGDANTAKPFQELVL 161
Query: 413 TTATLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIILLENILPWMTSYL 592
+T+Q TI HMLKEEEQVFPLL++QFS +EQASLVWQF CSVP++LLE+ LPWMTS+L
Sbjct: 162 LISTIQTTICHHMLKEEEQVFPLLMKQFSPQEQASLVWQFMCSVPVLLLEDFLPWMTSFL 221
Query: 593 PKDEQADVLHCIKEVVPKEELLQGVLESWLGRQTSLIGLSSTQNKAAMSSDESFYLKKFQ 772
+EQ +V++CIKEVVP+E+LL+ V+ SWLG G + + A S + LK
Sbjct: 222 SPEEQVNVVNCIKEVVPEEKLLEEVVISWLGNNNQPFGSPTRIGEEAQSVGPA-NLKDAL 280
Query: 773 KIYSWASSDKKNCIQGELDSLHDIAKYHPVDTLHLWHASAQKDFKGVLEDLYEISNSEVF 952
K+YS S + E+ L +PVD LHLWH + +KD KG+LE+LY+I +S+ F
Sbjct: 281 KVYSSKSFSTEIRQWKEVFGLKTNVGQNPVDGLHLWHGAIRKDLKGILEELYQIRSSDSF 340
Query: 953 SNLASV 970
S LASV
Sbjct: 341 STLASV 346
>ref|XP_003550768.1| PREDICTED: uncharacterized protein LOC100802706 [Glycine max]
Length = 1262
Score = 258 bits (660), Expect = 1e-66
Identities = 138/307 (44%), Positives = 190/307 (61%), Gaps = 2/307 (0%)
Frame = +2
Query: 56 LLDAPILLFVSFHKAFHAELGEIYRYISSDSF--DVSSTGHGEILDIRNRFEFLKLVYRY 229
L+DAPILLFV FHKAF +EL + R + S D +L ++ RF+FLKL ++Y
Sbjct: 28 LVDAPILLFVCFHKAFRSELDHLRRLAETASSLEDEPRRCRQIVLQLQRRFQFLKLAHKY 87
Query: 230 HCAAEDEIVFRALDVHVSNVACTYSLEHRGIDDLFDSVFQCLILLLDNDGNSSMHYQELV 409
HCAAEDE++F ALD HV NV CTYSLEHR + LF SVF L L+ N S +QELV
Sbjct: 88 HCAAEDEVIFLALDTHVKNVICTYSLEHRSTNGLFGSVFHFLDELMVPKENISKLFQELV 147
Query: 410 YTTATLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIILLENILPWMTSY 589
Y LQ +I QHMLKEEEQVFPLL+Q+ S KEQASLVWQF CSVPI+LLE +LPWM S+
Sbjct: 148 YCIGILQTSIYQHMLKEEEQVFPLLIQKLSNKEQASLVWQFICSVPIMLLEEVLPWMVSF 207
Query: 590 LPKDEQADVLHCIKEVVPKEELLQGVLESWLGRQTSLIGLSSTQNKAAMSSDESFYLKKF 769
L ++Q++V C+ E+ P E+ +Q VL SWL + Q+ D ++++
Sbjct: 208 LSANKQSEVTQCLNEIAPMEKAMQEVLVSWLRSSKQTCTETCFQSGEFQGVDGFLHIERS 267
Query: 770 QKIYSWASSDKKNCIQGELDSLHDIAKYHPVDTLHLWHASAQKDFKGVLEDLYEISNSEV 949
++ + ++ +++ + V+ LHLWH + +KD K +LE+L+ + S
Sbjct: 268 LELSYCNRNSEEISSPMKVNGKEIEDGANQVNVLHLWHNAIKKDLKDILEELHLLRKSSC 327
Query: 950 FSNLASV 970
F NL S+
Sbjct: 328 FQNLDSI 334
Score = 68.2 bits (165), Expect = 3e-09
Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 19/239 (7%)
Frame = +2
Query: 20 PKCDLEKEMVGSLLD--APILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGEILDIR 193
P E+ S LD PI L FHKA +L Y + S + + ++D
Sbjct: 593 PTLHAEERSSISFLDDPKPIDLIFFFHKAIKKDLE--YLVLGSTQLEKNDK---LLMDFH 647
Query: 194 NRFEFLKLVYRYHCAAEDEIVFRALDVH--VSNVACTYSLEHRGIDDLFDSVFQCLILL- 364
RF + +++ H AEDEIVF A++ + N++ Y+ +H+ D F+ + L +
Sbjct: 648 KRFHLIYFLHQIHSDAEDEIVFPAMEARGKLKNISHAYTFDHKHEVDHFNKISHILDKMS 707
Query: 365 ------------LDNDGNSSMHY--QELVYTTATLQATISQHMLKEEEQVFPLLVQQFSF 502
+ G H+ ++L ++ ++S H+ +EE +++P++ + FS
Sbjct: 708 GLHLSVSTIDPNVKEKGILRYHHLCRKLQEMCKSMHKSLSDHINREEIEIWPIIRKFFSN 767
Query: 503 KEQASLVWQFFCSVPIILLENILPWMTSYLPKDEQADVLHCIKEVVPKEELLQGVLESW 679
EQ ++ + +L++++PW+ + L ++EQ VL + + K + L W
Sbjct: 768 HEQGRIIGCMLGRIRAEILQDMIPWLMASLTQEEQ-HVLMFLWSMATKNTMFDEWLGEW 825
>ref|XP_003622400.1| RING finger and CHY zinc finger domain-containing protein [Medicago
truncatula] gi|355497415|gb|AES78618.1| RING finger and
CHY zinc finger domain-containing protein [Medicago
truncatula]
Length = 1225
Score = 258 bits (658), Expect = 2e-66
Identities = 138/308 (44%), Positives = 187/308 (60%), Gaps = 12/308 (3%)
Frame = +2
Query: 56 LLDAPILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGE------ILDIRNRFEFLKL 217
+ DAPILLFV FH+A +EL ++ + + SS H + +++RF+FLKL
Sbjct: 34 IFDAPILLFVCFHQALRSELDQLRPFAET----ASSLEHDPNRCREIVFKLQHRFQFLKL 89
Query: 218 VYRYHCAAEDEIVFRALDVHVSNVACTYSLEHRGIDDLFDSVFQCLILLLDNDGNSSMHY 397
++YHCAAEDEI+F ALD+HV NV CTYSLEH + LFDS+ L L+ + N S +
Sbjct: 90 AFKYHCAAEDEIIFHALDIHVKNVVCTYSLEHNSTNGLFDSILHFLDELMGSSENISKLF 149
Query: 398 QELVYTTATLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIILLENILPW 577
+ELVY LQ ++ QHMLKEEEQVFPLL+Q+ S KEQASLVWQF CSVPI+LLE +LPW
Sbjct: 150 RELVYCIDILQTSVYQHMLKEEEQVFPLLIQKLSTKEQASLVWQFICSVPIMLLEEVLPW 209
Query: 578 MTSYLPKDEQADVLHCIKEVVPKEELLQGVLESWLGRQTSLIGLSSTQNKAAMSSDESFY 757
M S+L D+QA+V C E+ P E LQ VL SWLG + Q++ S +
Sbjct: 210 MVSFLSADKQAEVTRCFNEIAPMETTLQEVLVSWLGSNKQTFTGTYFQSEELQGSHGFLH 269
Query: 758 LKK------FQKIYSWASSDKKNCIQGELDSLHDIAKYHPVDTLHLWHASAQKDFKGVLE 919
++K F + YS S ++ E + + + LHLWH + +KD K +L+
Sbjct: 270 IEKPFGPSSFNRNYSKEISSQRKVNDKETED-----GVNQIKVLHLWHNAIKKDLKEILQ 324
Query: 920 DLYEISNS 943
+LY I NS
Sbjct: 325 ELYLIRNS 332
Score = 71.2 bits (173), Expect = 3e-10
Identities = 72/318 (22%), Positives = 146/318 (45%), Gaps = 20/318 (6%)
Frame = +2
Query: 68 PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGEIL-DIRNRFEFLKLVYRYHCAAE 244
PI L FHKA +L Y+ S + GH +++ D + RF + +++ H AE
Sbjct: 620 PIDLIFFFHKAIKKDLD----YLVHGSAQLE--GHDDLVTDFQKRFNLIYFLHQIHSDAE 673
Query: 245 DEIVFRALDV--HVSNVACTYSLEHRG-------IDDLFDSVFQCLILLLDNDGNSS--- 388
+EIVF AL+ + N++ Y+ +H+ + + D + + +L+ D
Sbjct: 674 EEIVFPALEAIGQLKNISHAYTFDHKHEVEHFGKMSRILDKISELHLLVSTTDSKIRDKR 733
Query: 389 ---MHY--QELVYTTATLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPII 553
H+ ++L ++ +S H+ +EE +++P++ + FS +EQ ++ +
Sbjct: 734 VLRRHHLIRKLQERCKSMHKLLSDHINREEIEIWPIIREFFSNREQGKIIGCILGRISAE 793
Query: 554 LLENILPWMTSYLPKDEQADVLHCIKEVVPKEELLQGVLESWLGRQTSLIGLSSTQNKAA 733
+L++++PW+ + L ++EQ VL + + K + + WLG + ++ KAA
Sbjct: 794 ILQDMIPWLMASLTQEEQ-HVLMFLWSMATKNTM----FDEWLGEWWNGYSVA----KAA 844
Query: 734 MSSDES--FYLKKFQKIYSWASSDKKNCIQGELDSLHDIAKYHPVDTLHLWHASAQKDFK 907
S+++ ++ + I + S + N +Q E + I QKD
Sbjct: 845 DGSNDAPLQNVEPLEIISKYLSEEVLNALQEESSANESI-------------TFLQKDLI 891
Query: 908 GVLEDLYEISNSEVFSNL 961
G + +E+SN+ V N+
Sbjct: 892 G---NNFELSNNNVDDNV 906
>ref|XP_002511501.1| zinc finger protein, putative [Ricinus communis]
gi|223550616|gb|EEF52103.1| zinc finger protein,
putative [Ricinus communis]
Length = 1268
Score = 254 bits (648), Expect = 3e-65
Identities = 144/322 (44%), Positives = 198/322 (61%), Gaps = 3/322 (0%)
Frame = +2
Query: 11 SSSPKCDLEKEMVGSLLDAPILLFVSFHKAFHAELGEIYRY--ISSDSFDVSSTGHGEIL 184
SS P + E SL DAPILL V FHKA EL E+YR ++S+S G I+
Sbjct: 21 SSMPAVESEPLSHVSLTDAPILLLVYFHKAMREELSELYRLAVLASESLP---NGRQLIV 77
Query: 185 DIRNRFEFLKLVYRYHCAAEDEIVFRALDVHVSNVACTYSLEHRGIDDLFDSVFQCLILL 364
++R RF+F K V +YH A EDE++F LD H+ N+ TYSLEH IDD+FDS+F CL L
Sbjct: 78 ELRRRFDFFKHVQKYHSAFEDEVIFLELDAHIKNIVYTYSLEHNSIDDIFDSIFHCLSTL 137
Query: 365 LDNDGNSSMHYQELVYTTATLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSV 544
+N + +QEL+ T+ ++I +HMLKEEEQVFPLL+Q FS KEQA LVWQFFCS+
Sbjct: 138 EENKDGAKT-FQELLSCIGTMDSSICKHMLKEEEQVFPLLIQHFSPKEQALLVWQFFCSI 196
Query: 545 PIILLENILPWMTSYLPKDEQADVLHCIKEVVPKEELLQGVLESWLGRQ-TSLIGLSSTQ 721
P+ILL +LPW+TS+L +++ +V CI+ VVP+E+ LQ V+ SWL S +G+ S
Sbjct: 197 PVILLVELLPWLTSFLTPEKRLNVTRCIEGVVPQEKSLQEVVVSWLHMNGQSSLGVFSKI 256
Query: 722 NKAAMSSDESFYLKKFQKIYSWASSDKKNCIQGELDSLHDIAKYHPVDTLHLWHASAQKD 901
K A SD LK + Y +S ++ + + A+ + +D L LWH + Q D
Sbjct: 257 RKEA--SDGPECLKSMPRFYFAENSLREKRQWKKSYCVQTNARNNVIDCLKLWHRAIQTD 314
Query: 902 FKGVLEDLYEISNSEVFSNLAS 967
K +LE+ Y NS FS++ S
Sbjct: 315 LKEILEEAYLTRNSRSFSDIDS 336
Score = 69.3 bits (168), Expect = 1e-09
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Frame = +2
Query: 68 PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGEILDIRNRFEFLKLVYRYHCAAED 247
P+ FHKA +L Y+ S S ++ +++ F L L Y++H ED
Sbjct: 623 PMDFIFFFHKALKKDL----EYLVSGSAQLAENIRF-LVEFSQHFHLLWLRYQFHSETED 677
Query: 248 EIVFRALDV--HVSNVACTYSLEHRGIDDLFDSVFQCLIL----------------LLDN 373
EI F AL+ +V N++ +Y+++H+ LF+ + LIL +LD
Sbjct: 678 EIAFPALEAKGNVQNISYSYTIDHKLEVKLFNEI--SLILEKMSKLHVSLSTVDSGMLDQ 735
Query: 374 D-GNSSMHYQELVYTTATLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPI 550
+ ++L T ++ +S H+ EE +++PL + FS +EQ ++ V
Sbjct: 736 TVAKYNQQCKKLHLTCKSMHKLLSDHIHHEEIELWPLFRECFSIEEQEKIIGLMIGKVGA 795
Query: 551 ILLENILPWMTSYLPKDEQADVLHCIKEVVPKEELLQGVLESWL 682
L++++PW+T L +EQ VL + V K L WL
Sbjct: 796 KFLQDMIPWLTGSLTPEEQ-HVLMSLWRKVTKNTKFDEWLGEWL 838