BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018335
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB72467.1| putative protein [Arabidopsis thaliana]                67   2e-13
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]                          65   2e-13
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                64   1e-12
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    65   3e-12
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    65   5e-12

>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 67.0 bits (162), Expect(2) = 2e-13
 Identities = 26/63 (41%), Positives = 42/63 (66%)
 Frame = +1

Query: 214 ALISWDASCSSYYEGGLGLRELEKVNEAAIMRQTWKLLTKKDTVWAEWVHKNLIKKCIFW 393
           A ISW+  C    EGGLGLR L++ N+   ++  W++++  D++W +WV  NL+K+ IFW
Sbjct: 411 AKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFW 470

Query: 394 QLK 402
            +K
Sbjct: 471 IVK 473



 Score = 33.5 bits (75), Expect(2) = 2e-13
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 122 AAFMIARGAVKEINKICRNFLWGGLTVTNLMHSSA 226
           +AF + R  ++EI K+C +FLW G   TNL    A
Sbjct: 380 SAFQLPRACIQEIEKLCSSFLWSG---TNLNSKKA 411


>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
          Length = 382

 Score = 65.5 bits (158), Expect(2) = 2e-13
 Identities = 25/70 (35%), Positives = 43/70 (61%)
 Frame = +1

Query: 193 PDCDQSHALISWDASCSSYYEGGLGLRELEKVNEAAIMRQTWKLLTKKDTVWAEWVHKNL 372
           PD +   A +SW   C    EGGLGLR L+++N+   ++  W+L++  +++W +W+ K L
Sbjct: 268 PDLNPHKAKLSWVDVCKPKQEGGLGLRPLKEINDVCCLKLIWRLVSHANSLWVQWIEKYL 327

Query: 373 IKKCIFWQLK 402
           +K   FW +K
Sbjct: 328 LKADTFWSVK 337



 Score = 35.0 bits (79), Expect(2) = 2e-13
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 122 AAFMIARGAVKEINKICRNFLWGG 193
           +AF + RG +KEI K+C  FLW G
Sbjct: 244 SAFRLPRGCIKEIEKLCSAFLWSG 267


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 64.3 bits (155), Expect(2) = 1e-12
 Identities = 25/63 (39%), Positives = 41/63 (65%)
 Frame = +1

Query: 214 ALISWDASCSSYYEGGLGLRELEKVNEAAIMRQTWKLLTKKDTVWAEWVHKNLIKKCIFW 393
           A ISWD  C    EGGLGLR L++ N+ + ++  W++++  +++W +WV + LI+K   W
Sbjct: 505 AKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIW 564

Query: 394 QLK 402
            LK
Sbjct: 565 SLK 567



 Score = 33.5 bits (75), Expect(2) = 1e-12
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2

Query: 122 AAFMIARGAVKEINKICRNFLWGG 193
           AAF + R  ++EI+K+C +FLW G
Sbjct: 474 AAFRLPRQCIREIDKLCSSFLWSG 497


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 64.7 bits (156), Expect(2) = 3e-12
 Identities = 23/87 (26%), Positives = 52/87 (59%)
 Frame = +1

Query: 193 PDCDQSHALISWDASCSSYYEGGLGLRELEKVNEAAIMRQTWKLLTKKDTVWAEWVHKNL 372
           P+   + A I+W+  C    EGGLGL+ +++ N+   ++  W+++++ D++W +W+   L
Sbjct: 369 PELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYL 428

Query: 373 IKKCIFWQLKVPNDCSVELEELTKHKE 453
           +K+  FW  +  +  S   ++L K+++
Sbjct: 429 LKRNTFWSFRSASQGSWMWKKLLKYRD 455



 Score = 31.6 bits (70), Expect(2) = 3e-12
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 122 AAFMIARGAVKEINKICRNFLWGG 193
           +AF + R  V+EI+K+C  FLW G
Sbjct: 345 SAFRLPRECVREIDKLCSAFLWSG 368


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 64.7 bits (156), Expect(2) = 5e-12
 Identities = 27/73 (36%), Positives = 43/73 (58%)
 Frame = +1

Query: 193 PDCDQSHALISWDASCSSYYEGGLGLRELEKVNEAAIMRQTWKLLTKKDTVWAEWVHKNL 372
           P+  +  A +SWD  C    EGGLGLR L + N  ++++  W++ +  D++W +W   NL
Sbjct: 256 PELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNL 315

Query: 373 IKKCIFWQLKVPN 411
           +K+  FW L  PN
Sbjct: 316 LKQESFWSL-TPN 327



 Score = 30.8 bits (68), Expect(2) = 5e-12
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 122 AAFMIARGAVKEINKICRNFLWGG 193
           +AF +    +KEIN IC  FLW G
Sbjct: 232 SAFRLPSACLKEINSICSAFLWSG 255