BLASTX nr result

ID: Coptis24_contig00018331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018331
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31217.3| unnamed protein product [Vitis vinifera]              163   3e-38
ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing...   163   3e-38
emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]   163   3e-38
ref|XP_003548465.1| PREDICTED: nucleolar MIF4G domain-containing...   160   3e-37
ref|XP_003553340.1| PREDICTED: nucleolar MIF4G domain-containing...   159   5e-37

>emb|CBI31217.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  163 bits (413), Expect = 3e-38
 Identities = 86/122 (70%), Positives = 97/122 (79%)
 Frame = -1

Query: 665 LTENVKYIAPHLRARARNESEEHTQIRRHVRGLLNRLSETNVESITEEMSSIYRSIGRVT 486
           L  +VKYIAPHLR+RA NE  E+ QIRR +RGLLNRLSE+NVESI  EMS+I+ S GR  
Sbjct: 23  LEGSVKYIAPHLRSRAGNELGEYHQIRRQIRGLLNRLSESNVESIAGEMSTIFHSAGRRV 82

Query: 485 GTQIISEEVLASCSGGPRGNEQYXXXXXXXXXXXACLVGSDFSAKLIASLAKSFEDEFMK 306
           G+QIISEEVLASCSGGPRGNEQY           ACLVG DFSAKL+ASLAKSFEDE++K
Sbjct: 83  GSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLAKSFEDEYIK 142

Query: 305 ED 300
           ED
Sbjct: 143 ED 144



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = -2

Query: 121 LSILSKRLLEIDVSTILTILQCCGMKLRGDDPSAMKDFI 5
           L I SK+LLEIDVSTILTILQCCGMKLR DDP+AMKDFI
Sbjct: 173 LIIRSKQLLEIDVSTILTILQCCGMKLRRDDPAAMKDFI 211


>ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing protein 1 [Vitis
           vinifera]
          Length = 700

 Score =  163 bits (413), Expect = 3e-38
 Identities = 86/122 (70%), Positives = 97/122 (79%)
 Frame = -1

Query: 665 LTENVKYIAPHLRARARNESEEHTQIRRHVRGLLNRLSETNVESITEEMSSIYRSIGRVT 486
           L  +VKYIAPHLR+RA NE  E+ QIRR +RGLLNRLSE+NVESI  EMS+I+ S GR  
Sbjct: 187 LEGSVKYIAPHLRSRAGNELGEYHQIRRQIRGLLNRLSESNVESIAGEMSTIFHSAGRRV 246

Query: 485 GTQIISEEVLASCSGGPRGNEQYXXXXXXXXXXXACLVGSDFSAKLIASLAKSFEDEFMK 306
           G+QIISEEVLASCSGGPRGNEQY           ACLVG DFSAKL+ASLAKSFEDE++K
Sbjct: 247 GSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLAKSFEDEYIK 306

Query: 305 ED 300
           ED
Sbjct: 307 ED 308



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = -2

Query: 121 LSILSKRLLEIDVSTILTILQCCGMKLRGDDPSAMKDFI 5
           L I SK+LLEIDVSTILTILQCCGMKLR DDP+AMKDFI
Sbjct: 337 LIIRSKQLLEIDVSTILTILQCCGMKLRRDDPAAMKDFI 375


>emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]
          Length = 700

 Score =  163 bits (413), Expect = 3e-38
 Identities = 86/122 (70%), Positives = 97/122 (79%)
 Frame = -1

Query: 665 LTENVKYIAPHLRARARNESEEHTQIRRHVRGLLNRLSETNVESITEEMSSIYRSIGRVT 486
           L  +VKYIAPHLR+RA NE  E+ QIRR +RGLLNRLSE+NVESI  EMS+I+ S GR  
Sbjct: 187 LEGSVKYIAPHLRSRAGNELGEYHQIRRQIRGLLNRLSESNVESIAGEMSTIFHSAGRRV 246

Query: 485 GTQIISEEVLASCSGGPRGNEQYXXXXXXXXXXXACLVGSDFSAKLIASLAKSFEDEFMK 306
           G+QIISEEVLASCSGGPRGNEQY           ACLVG DFSAKL+ASLAKSFEDE++K
Sbjct: 247 GSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLAKSFEDEYIK 306

Query: 305 ED 300
           ED
Sbjct: 307 ED 308



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = -2

Query: 121 LSILSKRLLEIDVSTILTILQCCGMKLRGDDPSAMKDFI 5
           L I SK+LLEIDVSTILTILQCCGMKLR DDP+AMKDFI
Sbjct: 337 LIIRSKQLLEIDVSTILTILQCCGMKLRRDDPAAMKDFI 375


>ref|XP_003548465.1| PREDICTED: nucleolar MIF4G domain-containing protein 1-like
           [Glycine max]
          Length = 793

 Score =  160 bits (405), Expect = 3e-37
 Identities = 83/125 (66%), Positives = 94/125 (75%)
 Frame = -1

Query: 674 LPELTENVKYIAPHLRARARNESEEHTQIRRHVRGLLNRLSETNVESITEEMSSIYRSIG 495
           +PE     KYIAPHLRARA NE EEHTQIRR VRGLLNRLSE+NVESIT E+S I++S+ 
Sbjct: 277 VPEKKAKEKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRLSESNVESITGELSLIFQSVA 336

Query: 494 RVTGTQIISEEVLASCSGGPRGNEQYXXXXXXXXXXXACLVGSDFSAKLIASLAKSFEDE 315
           R   TQI++EEVLASCS GPRGN+QY           ACLVG DFSAK +AS AK FEDE
Sbjct: 337 RSVATQILTEEVLASCSSGPRGNQQYAAVFAAFVAGMACLVGVDFSAKFMASFAKCFEDE 396

Query: 314 FMKED 300
           + KED
Sbjct: 397 YNKED 401



 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = -2

Query: 121 LSILSKRLLEIDVSTILTILQCCGMKLRGDDPSAMKDFI 5
           L +LSKRL E DVS IL +LQCCGMK+R DDP+AMKDFI
Sbjct: 430 LVMLSKRLTEADVSIILALLQCCGMKIRADDPAAMKDFI 468


>ref|XP_003553340.1| PREDICTED: nucleolar MIF4G domain-containing protein 1-like
           [Glycine max]
          Length = 794

 Score =  159 bits (403), Expect = 5e-37
 Identities = 82/125 (65%), Positives = 94/125 (75%)
 Frame = -1

Query: 674 LPELTENVKYIAPHLRARARNESEEHTQIRRHVRGLLNRLSETNVESITEEMSSIYRSIG 495
           +PE     KYIAPHLRARA NE EEHTQIRR VRGLLNRLSE+NVESIT E+S I++S+ 
Sbjct: 278 VPEKKAKEKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRLSESNVESITGELSLIFQSVA 337

Query: 494 RVTGTQIISEEVLASCSGGPRGNEQYXXXXXXXXXXXACLVGSDFSAKLIASLAKSFEDE 315
           R   +QI++EEVLASCS GPRGN+QY           ACLVG DFSAK +AS AK FEDE
Sbjct: 338 RSVASQILTEEVLASCSSGPRGNQQYAAVFAAFVAGMACLVGVDFSAKFVASFAKCFEDE 397

Query: 314 FMKED 300
           + KED
Sbjct: 398 YNKED 402



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -2

Query: 121 LSILSKRLLEIDVSTILTILQCCGMKLRGDDPSAMKDFI 5
           L ++SKRL E DVS ILT+LQCCGMKLR DDP+AMKDFI
Sbjct: 431 LVMVSKRLTEADVSIILTLLQCCGMKLRADDPAAMKDFI 469


Top