BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018330
         (1326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285915.1| PREDICTED: cytoplasmic tRNA 2-thiolation pro...   650   0.0  
ref|XP_003634474.1| PREDICTED: cytoplasmic tRNA 2-thiolation pro...   640   0.0  
emb|CBI18888.3| unnamed protein product [Vitis vinifera]              639   0.0  
ref|NP_181956.2| cytoplasmic tRNA 2-thiolation protein 1 [Arabid...   630   e-178
ref|XP_002881955.1| hypothetical protein ARALYDRAFT_483552 [Arab...   630   e-178

>ref|XP_002285915.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 1
            [Vitis vinifera]
          Length = 356

 Score =  650 bits (1677), Expect = 0.0
 Identities = 318/356 (89%), Positives = 336/356 (94%), Gaps = 2/356 (0%)
 Frame = -1

Query: 1242 IGEA-AKPKKTGGRQCSICNQRRPALKRPKTLEQICRECFYAVFEDEIHKVIVDNKLFKS 1066
            +GEA  KPKK G  QCSIC+QRR ALKRPKTLEQICRECFYAVFE+EIH+V+VDN+LFK 
Sbjct: 1    MGEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKP 60

Query: 1065 GERIGIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNELQ 886
            GERI IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNE+Q
Sbjct: 61   GERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 885  YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 706
            YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA+LKVDKLATGHNA
Sbjct: 121  YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNA 180

Query: 705  DDIAETVLLNILRGDIARLGRCTSIVTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFS 526
            DDIAETVLLNILRGDIARL RCTSI+TGEDGPIPRCKPFKYTYEKEIVMYAYFK+LDYFS
Sbjct: 181  DDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKRLDYFS 240

Query: 525  TECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGESFRISNQTKMPEQGTCERCGYIS 346
            TECIYSPNAYRGFAREFIKDLERIRPRAILDII+SGE FRIS   KMPEQGTCERCGYIS
Sbjct: 241  TECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAKMPEQGTCERCGYIS 300

Query: 345  SQKWCKACVLLEGLNRGLPRLGIGRTRGL-NGHMTGVEKADGAQSIQSKQCGTLDF 181
            SQKWCKACVLLEGLNRGLP+LGIGRTRGL NG     ++++G ++IQSKQCGTLDF
Sbjct: 301  SQKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNIQSKQCGTLDF 356


>ref|XP_003634474.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 2
            [Vitis vinifera]
          Length = 363

 Score =  640 bits (1651), Expect = 0.0
 Identities = 316/363 (87%), Positives = 335/363 (92%), Gaps = 9/363 (2%)
 Frame = -1

Query: 1242 IGEA-AKPKKTGGRQCSICNQRRPALKRPKTLEQICRECFYAVFEDEIHKVIVDNKLFKS 1066
            +GEA  KPKK G  QCSIC+QRR ALKRPKTLEQICRECFYAVFE+EIH+V+VDN+LFK 
Sbjct: 1    MGEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKP 60

Query: 1065 GERIGIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNELQ 886
            GERI IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNE+Q
Sbjct: 61   GERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 885  YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 706
            YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA+LKVDKLATGHNA
Sbjct: 121  YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNA 180

Query: 705  DDIAETVLLNILRGDIARLGRCTSIVTGEDGPIPRCKPFKYTYEKEIVM-------YAYF 547
            DDIAETVLLNILRGDIARL RCTSI+TGEDGPIPRCKPFKYTYEKEI+        YAYF
Sbjct: 181  DDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEILQNLNRIYTYAYF 240

Query: 546  KKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGESFRISNQTKMPEQGTC 367
            K+LDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDII+SGE FRIS   KMPEQGTC
Sbjct: 241  KRLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAKMPEQGTC 300

Query: 366  ERCGYISSQKWCKACVLLEGLNRGLPRLGIGRTRGL-NGHMTGVEKADGAQSIQSKQCGT 190
            ERCGYISSQKWCKACVLLEGLNRGLP+LGIGRTRGL NG     ++++G ++IQSKQCGT
Sbjct: 301  ERCGYISSQKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNIQSKQCGT 360

Query: 189  LDF 181
            LDF
Sbjct: 361  LDF 363


>emb|CBI18888.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score =  639 bits (1648), Expect = 0.0
 Identities = 317/370 (85%), Positives = 336/370 (90%), Gaps = 16/370 (4%)
 Frame = -1

Query: 1242 IGEA-AKPKKTGGRQCSICNQRRPALKRPKTLEQICRECFYAVFEDEIHKVIVDNKLFKS 1066
            +GEA  KPKK G  QCSIC+QRR ALKRPKTLEQICRECFYAVFE+EIH+V+VDN+LFK 
Sbjct: 1    MGEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKP 60

Query: 1065 GERIGIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNELQ 886
            GERI IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNE+Q
Sbjct: 61   GERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 885  YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 706
            YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA+LKVDKLATGHNA
Sbjct: 121  YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNA 180

Query: 705  DDIAETVLLNILRGDIARLGRCTSIVTGEDGPIPRCKPFKYTYEKEIVM----------- 559
            DDIAETVLLNILRGDIARL RCTSI+TGEDGPIPRCKPFKYTYEKEIV+           
Sbjct: 181  DDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVIYPYSFLQNLNR 240

Query: 558  ---YAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGESFRISNQTK 388
               YAYFK+LDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDII+SGE FRIS   K
Sbjct: 241  IYTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAK 300

Query: 387  MPEQGTCERCGYISSQKWCKACVLLEGLNRGLPRLGIGRTRGL-NGHMTGVEKADGAQSI 211
            MPEQGTCERCGYISSQKWCKACVLLEGLNRGLP+LGIGRTRGL NG     ++++G ++I
Sbjct: 301  MPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNI 360

Query: 210  QSKQCGTLDF 181
            QSKQCGTLDF
Sbjct: 361  QSKQCGTLDF 370


>ref|NP_181956.2| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
            gi|226711456|sp|O64862.2|CTU1_ARATH RecName:
            Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
            Full=Cytoplasmic tRNA adenylyltransferase 1
            gi|26449617|dbj|BAC41934.1| unknown protein [Arabidopsis
            thaliana] gi|30725380|gb|AAP37712.1| At2g44270
            [Arabidopsis thaliana] gi|330255305|gb|AEC10399.1|
            cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis
            thaliana]
          Length = 355

 Score =  630 bits (1626), Expect = e-178
 Identities = 306/354 (86%), Positives = 323/354 (91%), Gaps = 2/354 (0%)
 Frame = -1

Query: 1236 EAAKPKKTGGRQCSICNQRRPALKRPKTLEQICRECFYAVFEDEIHKVIVDNKLFKSGER 1057
            EA   K    R C +CN RRP LKRPKTL+QICRECFY VFE+EIH+VIV N+LFKSGER
Sbjct: 2    EAKNKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGER 61

Query: 1056 IGIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNELQYGL 877
            + IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLS+DEGITGYRDDSLETVKRNE+QYGL
Sbjct: 62   VAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGL 121

Query: 876  PLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDI 697
            PLK+VSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKV+KL TGHNADDI
Sbjct: 122  PLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDI 181

Query: 696  AETVLLNILRGDIARLGRCTSIVTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC 517
            AETVLLNILRGDIARL RCTSI TGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC
Sbjct: 182  AETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC 241

Query: 516  IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGESFRISNQTKMPEQGTCERCGYISSQK 337
            IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGE FRI+  TKMPEQGTCERCGYISSQK
Sbjct: 242  IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQK 301

Query: 336  WCKACVLLEGLNRGLPRLGIGRTRGLNGHMTGVEKADG--AQSIQSKQCGTLDF 181
            WCKACVLLEGLNRGLP++GIGR RG+NG      K  G  A+SI+SKQCG+LDF
Sbjct: 302  WCKACVLLEGLNRGLPKMGIGRPRGVNGDHNKETKKPGSVAKSIESKQCGSLDF 355


>ref|XP_002881955.1| hypothetical protein ARALYDRAFT_483552 [Arabidopsis lyrata subsp.
            lyrata] gi|297327794|gb|EFH58214.1| hypothetical protein
            ARALYDRAFT_483552 [Arabidopsis lyrata subsp. lyrata]
          Length = 355

 Score =  630 bits (1624), Expect = e-178
 Identities = 306/354 (86%), Positives = 323/354 (91%), Gaps = 2/354 (0%)
 Frame = -1

Query: 1236 EAAKPKKTGGRQCSICNQRRPALKRPKTLEQICRECFYAVFEDEIHKVIVDNKLFKSGER 1057
            EA   K    R C +CN RRP LKRPKTL+QICRECFY VFE+EIH+VIV N+LFKSGER
Sbjct: 2    EAKSKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGER 61

Query: 1056 IGIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNELQYGL 877
            + IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLS+DEGITGYRDDSLETVKRNE+QYGL
Sbjct: 62   VAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGL 121

Query: 876  PLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDI 697
            PL++VSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKL TGHNADDI
Sbjct: 122  PLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDI 181

Query: 696  AETVLLNILRGDIARLGRCTSIVTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC 517
            AETVLLNILRGDIARL RCTSI TGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC
Sbjct: 182  AETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC 241

Query: 516  IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGESFRISNQTKMPEQGTCERCGYISSQK 337
            IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGE FRI+  TKMPEQGTCERCGYISSQK
Sbjct: 242  IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQK 301

Query: 336  WCKACVLLEGLNRGLPRLGIGRTRGLNGHMTGVEKADG--AQSIQSKQCGTLDF 181
            WCKACVLLEGLNRGLP++GIGR RG+NG      K  G  A+SI+SKQCG+LDF
Sbjct: 302  WCKACVLLEGLNRGLPKMGIGRPRGVNGDHKMETKKPGSVAKSIESKQCGSLDF 355