BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018317
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ...    76   3e-12
ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat...    73   3e-11
ref|XP_003609638.1| Pentatricopeptide repeat-containing protein ...    72   6e-11

>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +2

Query: 2   ICKDCHEALKYMSIVIEREILVRDVNRYHRFMHGSCTCGDHW 127
           ICKDCHEA KYM+ VIEREI+VRDVNRYHRF++G+CTC D W
Sbjct: 520 ICKDCHEAFKYMTRVIEREIIVRDVNRYHRFVNGNCTCSDIW 561


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +2

Query: 2   ICKDCHEALKYMSIVIEREILVRDVNRYHRFMHGSCTCGDHW 127
           ICKDCHEA KYM+ V+EREI+VRDVNRYHRF++G+CTC D W
Sbjct: 520 ICKDCHEAFKYMTRVLEREIIVRDVNRYHRFVNGNCTCRDIW 561


>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486783|gb|AES67986.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 29/42 (69%), Positives = 36/42 (85%)
 Frame = +2

Query: 2   ICKDCHEALKYMSIVIEREILVRDVNRYHRFMHGSCTCGDHW 127
           IC+DCH A+K++S ++EREI VRDVNRYH F HG C+CGDHW
Sbjct: 579 ICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620


>ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 28/42 (66%), Positives = 35/42 (83%)
 Frame = +2

Query: 2   ICKDCHEALKYMSIVIEREILVRDVNRYHRFMHGSCTCGDHW 127
           IC+DCH A+K++S + EREI VRDVNRYH F HG C+CGD+W
Sbjct: 590 ICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631


>ref|XP_003609638.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510693|gb|AES91835.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 589

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 27/42 (64%), Positives = 35/42 (83%)
 Frame = +2

Query: 2   ICKDCHEALKYMSIVIEREILVRDVNRYHRFMHGSCTCGDHW 127
           +C+DCHEA K +S ++ERE +VRDVNR+H F +GSCTCGD W
Sbjct: 548 MCRDCHEAFKLISDIVEREFVVRDVNRFHHFKNGSCTCGDFW 589