BLASTX nr result
ID: Coptis24_contig00018313
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00018313
(745 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519373.1| leucine-rich repeat containing protein, puta... 100 5e-19
ref|XP_002302959.1| cc-nbs-lrr resistance protein [Populus trich... 96 1e-17
ref|XP_002317122.1| nbs-lrr resistance protein [Populus trichoca... 92 1e-16
ref|XP_002316539.1| nbs-lrr resistance protein [Populus trichoca... 91 3e-16
ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trich... 91 3e-16
>ref|XP_002519373.1| leucine-rich repeat containing protein, putative [Ricinus communis]
gi|223541440|gb|EEF42990.1| leucine-rich repeat
containing protein, putative [Ricinus communis]
Length = 1208
Score = 99.8 bits (247), Expect = 5e-19
Identities = 57/134 (42%), Positives = 83/134 (61%), Gaps = 3/134 (2%)
Frame = -2
Query: 393 NLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTALQNLHLA 217
NL SLE + I+ CPR+ LP +G LTSL +L+I CE+L +LS G++YLTAL+ L +
Sbjct: 1014 NLTSLELIKIEECPRLQCLPGEGFRALTSLRTLRIYRCENLKTLSQGIQYLTALEELRIK 1073
Query: 216 RCEKMHILEDDM--DGLTSLRTLEIKKIPNLVSIPKGLQNATALKEFSIIDCQSLLHAFP 43
CEK+H+ +D M L +L LE+ IP + S+P +Q+ L E I +C S L P
Sbjct: 1074 SCEKLHLSDDGMQLQDLKNLHCLELNDIPRMTSLPNWIQDIPCLLELHIEECHS-LSTLP 1132
Query: 42 EGISLPTTLEKLWI 1
E I ++L++L I
Sbjct: 1133 EWIGSLSSLQRLKI 1146
>ref|XP_002302959.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222844685|gb|EEE82232.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1285
Score = 95.5 bits (236), Expect = 1e-17
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Frame = -2
Query: 393 NLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTALQNLHLA 217
NL SLE L I+ C R+ SLP GL GL+SL L I C+ ASLS G+R+LTAL++L L
Sbjct: 852 NLTSLEVLEIQTCRRLNSLPMNGLCGLSSLRRLSIHICDQFASLSEGVRHLTALEDLSLF 911
Query: 216 RCEKMHILEDDMDGLTSLRTLEIKKIPNLVSIPKGLQNATALKEFSIIDCQSLLHAFPEG 37
C +++ L + + L+SLR+L I L S+P ++ T+L +I DC +L+ +FP+G
Sbjct: 912 GCPELNSLPESIQHLSSLRSLSIHHCTGLTSLPDQIRYLTSLSSLNIWDCPNLV-SFPDG 970
Query: 36 ISLPTTLEKLWI 1
+ L KL I
Sbjct: 971 VQSLNNLGKLII 982
Score = 87.4 bits (215), Expect = 3e-15
Identities = 54/132 (40%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Frame = -2
Query: 393 NLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTALQNLHLA 217
NL SLE L I C R+ SLP L L+SL L I C+ ASLS G+R+LTAL++L L
Sbjct: 1120 NLTSLEILEILSCKRLNSLPMNELCSLSSLRHLSIHFCDQFASLSEGVRHLTALEDLSLF 1179
Query: 216 RCEKMHILEDDMDGLTSLRTLEIKKIPNLVSIPKGLQNATALKEFSIIDCQSLLHAFPEG 37
C +++ L + + +TSLR+L I+ L S+P + T+L +I C +L+ +FP+G
Sbjct: 1180 GCHELNSLPESIQHITSLRSLSIQYCTGLTSLPDQIGYLTSLSSLNIWGCPNLV-SFPDG 1238
Query: 36 ISLPTTLEKLWI 1
+ L KL I
Sbjct: 1239 VQSLNNLSKLII 1250
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = -2
Query: 393 NLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASLSG-MRYLTALQNLHLA 217
+L +LE L++ CP + SLPE + L+SL SL I C L SL +RYLT+L +L++
Sbjct: 901 HLTALEDLSLFGCPELNSLPES-IQHLSSLRSLSIHHCTGLTSLPDQIRYLTSLSSLNIW 959
Query: 216 RCEKMHILEDDMDGLTSLRTLEIKKIPNLVSIPKGLQN 103
C + D + L +L L IK P+L K ++N
Sbjct: 960 DCPNLVSFPDGVQSLNNLGKLIIKNCPSLEKSTKSMRN 997
>ref|XP_002317122.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222860187|gb|EEE97734.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1234
Score = 92.0 bits (227), Expect = 1e-16
Identities = 55/130 (42%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Frame = -2
Query: 393 NLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASL-SGMRYLTALQNLHLA 217
NL SLE+L I CP + SLPE+ L GL+SL SL I +C SL SL S M++ TAL+ L +
Sbjct: 1033 NLTSLESLEIIECPNLVSLPEESLEGLSSLRSLSIENCHSLTSLPSRMQHATALERLTIM 1092
Query: 216 RCEKMHILEDDMDGLTSLRTLEIKKIPNLVSIPKGLQNATALKEFSIIDCQSLLHAFPEG 37
C + L + + L++L++L I L S+P+GLQ T L+ I DC PE
Sbjct: 1093 YCSNLVSLPNGLQHLSALKSLSILSCTGLASLPEGLQFITTLQNLEIHDC-------PEV 1145
Query: 36 ISLPTTLEKL 7
+ LP +E L
Sbjct: 1146 MELPAWVENL 1155
Score = 76.6 bits (187), Expect = 5e-12
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Frame = -2
Query: 384 SLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASL-SGMRYLTALQNLHLARCE 208
+LE L I +C + SLP GL L++L SL I C LASL G++++T LQNL + C
Sbjct: 1085 ALERLTIMYCSNLVSLPN-GLQHLSALKSLSILSCTGLASLPEGLQFITTLQNLEIHDCP 1143
Query: 207 KMHILEDDMDGLTSLRTLEIKKIPNLVSIPKGLQNATALKEFSIIDCQSL 58
++ L ++ L SLR+L I N+ S P+GLQ AL+ SI C L
Sbjct: 1144 EVMELPAWVENLVSLRSLTISDCQNIKSFPQGLQRLRALQHLSIRGCPEL 1193
Score = 64.7 bits (156), Expect = 2e-08
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Frame = -2
Query: 390 LASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASL-SGMRYLTALQNLHLAR 214
L S+ TL I P + +P+ + L+SL IS C L SL + + L L+ L +
Sbjct: 961 LRSISTLIIGNFPELLYIPKALIENNLLLLSLTISFCPKLRSLPANVGQLQNLKFLRIGW 1020
Query: 213 CEKMHILEDDMDGLTSLRTLEIKKIPNLVSIP-KGLQNATALKEFSIIDCQSLLHAFPEG 37
+++H L + LTSL +LEI + PNLVS+P + L+ ++L+ SI +C SL + P
Sbjct: 1021 FQELHSLPHGLTNLTSLESLEIIECPNLVSLPEESLEGLSSLRSLSIENCHSLT-SLPSR 1079
Query: 36 ISLPTTLEKLWI 1
+ T LE+L I
Sbjct: 1080 MQHATALERLTI 1091
>ref|XP_002316539.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222859604|gb|EEE97151.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1065
Score = 90.5 bits (223), Expect = 3e-16
Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = -2
Query: 393 NLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASL-SGMRYLTALQNLHLA 217
NL SLE+L I CP + SLPEQ L GL+SL SL I +C SL SL S M++ TAL+ L +
Sbjct: 890 NLTSLESLEIIECPNLVSLPEQSLEGLSSLRSLSIENCHSLTSLPSRMQHATALERLTIM 949
Query: 216 RCEKMHILEDDMDGLTSLRTLEIKKIPNLVSIPKGLQNATALKEFSIIDCQSLLHAFPEG 37
C + L + + L++L++L I L S+P+GLQ T L+ I DC P
Sbjct: 950 YCSNLVSLPNGLQHLSALKSLSILSCTGLASLPEGLQFITTLQNLEIHDC-------PGV 1002
Query: 36 ISLPTTLEKL 7
+ LP +E L
Sbjct: 1003 MELPAWVENL 1012
Score = 64.7 bits (156), Expect = 2e-08
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Frame = -2
Query: 390 LASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASL-SGMRYLTALQNLHLAR 214
L S+ TL I P + +P+ + L SL IS C L SL + + L L+ L +
Sbjct: 818 LRSISTLIIGNSPELLYIPKALIENNLLLSSLTISSCPKLRSLPANVGQLQNLKFLKIGW 877
Query: 213 CEKMHILEDDMDGLTSLRTLEIKKIPNLVSIP-KGLQNATALKEFSIIDCQSLLHAFPEG 37
+++H L + LTSL +LEI + PNLVS+P + L+ ++L+ SI +C SL + P
Sbjct: 878 FQELHSLPHGLTNLTSLESLEIIECPNLVSLPEQSLEGLSSLRSLSIENCHSLT-SLPSR 936
Query: 36 ISLPTTLEKLWI 1
+ T LE+L I
Sbjct: 937 MQHATALERLTI 948
Score = 57.0 bits (136), Expect = 4e-06
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = -2
Query: 384 SLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASL-SGMRYLTALQNLHLARCE 208
+LE L I +C + SLP GL L++L SL I C LASL G++++T LQNL + C
Sbjct: 942 ALERLTIMYCSNLVSLPN-GLQHLSALKSLSILSCTGLASLPEGLQFITTLQNLEIHDCP 1000
Query: 207 KMHILEDDMDGLTSLRTLEIKKIPNL 130
+ L ++ L SLR+L I N+
Sbjct: 1001 GVMELPAWVENLVSLRSLTISDCQNI 1026
>ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222839627|gb|EEE77950.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1052
Score = 90.5 bits (223), Expect = 3e-16
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Frame = -2
Query: 393 NLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTALQNLHLA 217
+L SLE L I C R+ SLP GL GL+SL L I C ASLS G+++LTAL++L+L+
Sbjct: 887 HLTSLEVLEIWSCRRLNSLPMNGLCGLSSLRHLSIHYCNQFASLSEGVQHLTALEDLNLS 946
Query: 216 RCEKMHILEDDMDGLTSLRTLEIKKIPNLVSIPKGLQNATALKEFSIIDCQSLLHAFPEG 37
C +++ L + + L+SLR+L I+ L S+P + T+L +I C +L+ +FP+G
Sbjct: 947 HCPELNSLPESIQHLSSLRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCSNLV-SFPDG 1005
Query: 36 ISLPTTLEKLWI 1
+ L KL I
Sbjct: 1006 VQTLNNLSKLII 1017
Score = 56.2 bits (134), Expect = 7e-06
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = -2
Query: 393 NLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASLSG-MRYLTALQNLHLA 217
+L +LE LN+ CP + SLPE + L+SL SL I C L SL + YLT+L +L++
Sbjct: 936 HLTALEDLNLSHCPELNSLPES-IQHLSSLRSLSIQYCTGLTSLPDQIGYLTSLSSLNIR 994
Query: 216 RCEKMHILEDDMDGLTSLRTLEIKKIPNL 130
C + D + L +L L I PNL
Sbjct: 995 GCSNLVSFPDGVQTLNNLSKLIINNCPNL 1023