BLASTX nr result

ID: Coptis24_contig00018306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018306
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306441.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002327618.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_003629196.1| hypothetical protein MTR_8g074420 [Medicago ...   113   1e-23
ref|XP_003629198.1| hypothetical protein MTR_8g074450 [Medicago ...   112   2e-23
ref|XP_003629201.1| hypothetical protein MTR_8g074510 [Medicago ...   111   7e-23

>ref|XP_002306441.1| predicted protein [Populus trichocarpa] gi|222855890|gb|EEE93437.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/134 (44%), Positives = 88/134 (65%)
 Frame = +3

Query: 6   SFPSASHPLTARVEEELNKLRGWMMDSKPSLLNTTMVLQDGFGGLIRLFERVEDLLQLSH 185
           S PS SHP T R+EEELNKL+ W + S     +T+  + +G  GL  L++ ++DLL L+ 
Sbjct: 11  SLPSRSHPTTQRIEEELNKLKAWEVSSN----STSGSICNGLSGLEDLYKCMDDLLNLAS 66

Query: 186 TQQVLLQHRNEKCVDKVLDESLRLVDVCGTAKDALLWMKEHVQQTQSGLRRRRSEFDLTN 365
           TQQVL ++ NEKC+D++LD S+RL+DVC   +D LL  +E VQ  QS  RRR+ +  + +
Sbjct: 67  TQQVLSRYENEKCLDELLDGSVRLLDVCSIGRDILLRFREQVQALQSAFRRRKGDSSIES 126

Query: 366 EVDTYQFSRRKVNK 407
            V T+   R+K+ K
Sbjct: 127 SVATFTCFRKKMKK 140


>ref|XP_002327618.1| predicted protein [Populus trichocarpa] gi|222836703|gb|EEE75096.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/134 (44%), Positives = 88/134 (65%)
 Frame = +3

Query: 6   SFPSASHPLTARVEEELNKLRGWMMDSKPSLLNTTMVLQDGFGGLIRLFERVEDLLQLSH 185
           S PS SHP T R+EEELNKL+ W + S     +T+  + +G  GL  L++ ++DLL L+ 
Sbjct: 11  SLPSRSHPTTQRIEEELNKLKAWEVSSN----STSGSICNGLSGLEDLYKCMDDLLNLAS 66

Query: 186 TQQVLLQHRNEKCVDKVLDESLRLVDVCGTAKDALLWMKEHVQQTQSGLRRRRSEFDLTN 365
           TQQVL ++ NEKC+D++LD S+RL+DVC   +D LL  +E VQ  QS  RRR+ +  + +
Sbjct: 67  TQQVLSRYENEKCLDELLDGSVRLLDVCSIGRDILLRFREQVQALQSAFRRRKGDSSIES 126

Query: 366 EVDTYQFSRRKVNK 407
            V T+   R+K+ K
Sbjct: 127 SVATFTCFRKKMKK 140


>ref|XP_003629196.1| hypothetical protein MTR_8g074420 [Medicago truncatula]
           gi|355523218|gb|AET03672.1| hypothetical protein
           MTR_8g074420 [Medicago truncatula]
          Length = 290

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/136 (41%), Positives = 85/136 (62%)
 Frame = +3

Query: 6   SFPSASHPLTARVEEELNKLRGWMMDSKPSLLNTTMVLQDGFGGLIRLFERVEDLLQLSH 185
           S PS  HP T RV EELNKL+ W   S     +T+  +Q G   +  L+  +EDLL ++ 
Sbjct: 11  SLPSRFHPSTIRVHEELNKLKTWEGTST----STSSSIQTGLSLIEELYISLEDLLNMAS 66

Query: 186 TQQVLLQHRNEKCVDKVLDESLRLVDVCGTAKDALLWMKEHVQQTQSGLRRRRSEFDLTN 365
           TQQV+  HR EKC+++VLD S+R++D+CG  KD +L +KE+VQ   S LRRR+ +  +  
Sbjct: 67  TQQVISHHRGEKCIEEVLDSSMRILDICGITKDTILQIKENVQALHSCLRRRKGDSSVER 126

Query: 366 EVDTYQFSRRKVNKAI 413
            V+ Y+F  + + K +
Sbjct: 127 SVEEYKFFTKLMKKNV 142


>ref|XP_003629198.1| hypothetical protein MTR_8g074450 [Medicago truncatula]
           gi|355523220|gb|AET03674.1| hypothetical protein
           MTR_8g074450 [Medicago truncatula]
          Length = 290

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/136 (42%), Positives = 85/136 (62%)
 Frame = +3

Query: 6   SFPSASHPLTARVEEELNKLRGWMMDSKPSLLNTTMVLQDGFGGLIRLFERVEDLLQLSH 185
           S PS SHP T RVEEELNKL+ W   S     +T+  +  G   L  L+  +EDLL ++ 
Sbjct: 11  SLPSRSHPSTIRVEEELNKLKTWEGTST----STSGSIHIGLSLLEDLYMSMEDLLNMAS 66

Query: 186 TQQVLLQHRNEKCVDKVLDESLRLVDVCGTAKDALLWMKEHVQQTQSGLRRRRSEFDLTN 365
           TQQV+  H+ EKCV+++LD S+R++D+CG  +D +L  KE+VQ   S LRRR+ +  +  
Sbjct: 67  TQQVISHHQGEKCVEELLDSSMRILDICGITRDTILQTKENVQALHSSLRRRKGDSSVER 126

Query: 366 EVDTYQFSRRKVNKAI 413
            V  Y+F  +K+ K +
Sbjct: 127 SVAEYKFFTKKMKKNV 142


>ref|XP_003629201.1| hypothetical protein MTR_8g074510 [Medicago truncatula]
           gi|355523223|gb|AET03677.1| hypothetical protein
           MTR_8g074510 [Medicago truncatula]
          Length = 288

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/136 (41%), Positives = 85/136 (62%)
 Frame = +3

Query: 6   SFPSASHPLTARVEEELNKLRGWMMDSKPSLLNTTMVLQDGFGGLIRLFERVEDLLQLSH 185
           S PS SHP T RV+EELNKL+ W   S      T+  +  G   +  L+  ++DLL ++ 
Sbjct: 11  SLPSRSHPSTIRVDEELNKLKTWEGTS------TSCSIHIGLSLIDELYISLDDLLNMAS 64

Query: 186 TQQVLLQHRNEKCVDKVLDESLRLVDVCGTAKDALLWMKEHVQQTQSGLRRRRSEFDLTN 365
           TQQV+  HR EKC+++VLD S+R++D+CG  +D +L +KE+VQ   S LRRR+ +  +  
Sbjct: 65  TQQVISHHRGEKCIEEVLDSSMRILDICGITRDTILQIKENVQALHSCLRRRKGDSSVEI 124

Query: 366 EVDTYQFSRRKVNKAI 413
            V  Y+F  +K+ K +
Sbjct: 125 SVTQYKFFTKKMKKNV 140


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