BLASTX nr result

ID: Coptis24_contig00018305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018305
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625468.1| CLIP-associating protein [Medicago truncatul...   127   7e-28
ref|XP_003554315.1| PREDICTED: uncharacterized protein LOC100820...   126   2e-27
emb|CBI37240.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...   126   2e-27
ref|XP_003521327.1| PREDICTED: uncharacterized protein LOC100796...   124   6e-27

>ref|XP_003625468.1| CLIP-associating protein [Medicago truncatula]
           gi|355500483|gb|AES81686.1| CLIP-associating protein
           [Medicago truncatula]
          Length = 341

 Score =  127 bits (320), Expect = 7e-28
 Identities = 70/96 (72%), Positives = 78/96 (81%)
 Frame = +1

Query: 1   YSLLEASRKSLTSNEVTXXXXXXXXXXXXXXXYRVSQGVLQALASASVLSGEHFKLHFNS 180
           Y LLEASRKSL+S+EVT               +RVSQG LQ+LASA+VLSGEHFKLHFN+
Sbjct: 24  YHLLEASRKSLSSSEVTSLVDSCIDLLKDNN-FRVSQGALQSLASAAVLSGEHFKLHFNA 82

Query: 181 LVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTII 288
           L+PAVV+RLGD KQPVRDAARRLLLTLMEVSSPTII
Sbjct: 83  LLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTII 118


>ref|XP_003554315.1| PREDICTED: uncharacterized protein LOC100820523 [Glycine max]
          Length = 1444

 Score =  126 bits (316), Expect = 2e-27
 Identities = 69/96 (71%), Positives = 78/96 (81%)
 Frame = +1

Query: 1   YSLLEASRKSLTSNEVTXXXXXXXXXXXXXXXYRVSQGVLQALASASVLSGEHFKLHFNS 180
           + LLEASRKSL+S+EVT               +RVSQG LQALASA+VL+GEHFKLHFN+
Sbjct: 24  HQLLEASRKSLSSSEVTSLVDTCMDLLKDNN-FRVSQGALQALASAAVLAGEHFKLHFNA 82

Query: 181 LVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTII 288
           L+PAVV+RLGD KQPVRDAARRLLLTLMEVSSPTII
Sbjct: 83  LLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTII 118


>emb|CBI37240.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  126 bits (316), Expect = 2e-27
 Identities = 70/96 (72%), Positives = 78/96 (81%)
 Frame = +1

Query: 1   YSLLEASRKSLTSNEVTXXXXXXXXXXXXXXXYRVSQGVLQALASASVLSGEHFKLHFNS 180
           + LLE+SRK+L+S EVT               +RVSQG LQALASA+VLSG+HFKLHFN+
Sbjct: 24  HHLLESSRKALSSAEVTSLVDCCLDLLKDNN-FRVSQGSLQALASAAVLSGDHFKLHFNA 82

Query: 181 LVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTII 288
           LVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTII
Sbjct: 83  LVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTII 118


>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score =  126 bits (316), Expect = 2e-27
 Identities = 70/96 (72%), Positives = 78/96 (81%)
 Frame = +1

Query: 1   YSLLEASRKSLTSNEVTXXXXXXXXXXXXXXXYRVSQGVLQALASASVLSGEHFKLHFNS 180
           + LLE+SRK+L+S EVT               +RVSQG LQALASA+VLSG+HFKLHFN+
Sbjct: 24  HHLLESSRKALSSAEVTSLVDCCLDLLKDNN-FRVSQGSLQALASAAVLSGDHFKLHFNA 82

Query: 181 LVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTII 288
           LVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTII
Sbjct: 83  LVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTII 118


>ref|XP_003521327.1| PREDICTED: uncharacterized protein LOC100796697 [Glycine max]
          Length = 1440

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/96 (70%), Positives = 77/96 (80%)
 Frame = +1

Query: 1   YSLLEASRKSLTSNEVTXXXXXXXXXXXXXXXYRVSQGVLQALASASVLSGEHFKLHFNS 180
           + LLE SRKSL+S+EVT               +RVSQG LQALASA+VL+GEHFKLHFN+
Sbjct: 24  HQLLEVSRKSLSSSEVTSLVDTCMDLLKDNN-FRVSQGALQALASAAVLAGEHFKLHFNA 82

Query: 181 LVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTII 288
           L+PAVV+RLGD KQPVRDAARRLLLTLMEVSSPTII
Sbjct: 83  LLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTII 118


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