BLASTX nr result

ID: Coptis24_contig00018303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018303
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326656.1| predicted protein [Populus trichocarpa] gi|2...   484   e-134
ref|XP_002525341.1| acyl-CoA oxidase, putative [Ricinus communis...   478   e-133
gb|AAW78691.1| peroxisomal acyl-CoA oxidase 1A [Solanum cheesman...   471   e-131
ref|NP_001234198.1| peroxisomal acyl-CoA oxidase 1A [Solanum lyc...   471   e-131
pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-C...   471   e-131

>ref|XP_002326656.1| predicted protein [Populus trichocarpa] gi|222833978|gb|EEE72455.1|
           predicted protein [Populus trichocarpa]
          Length = 664

 Score =  484 bits (1246), Expect = e-134
 Identities = 227/257 (88%), Positives = 246/257 (95%)
 Frame = +2

Query: 80  VDHLADERNKAQFDVDAMKIVWAGSQHDFNVTDRMSRLVASDPAFSKDGRTMLGRKELVK 259
           VDHLA ERNK +FDVDAMKIVWAGS+H F ++DRM+RLVASDPAF KDGRT LGRKEL K
Sbjct: 4   VDHLAHERNKTEFDVDAMKIVWAGSRHAFELSDRMARLVASDPAFQKDGRTRLGRKELFK 63

Query: 260 NTLRKAAHAWKRIIELRLSEEEANKLRNFVDEPAFTDLHWGMFIPAIKGQGTDEQQQKWL 439
           NTLRKAAHAWKRI+ELRL+EEEA  LR+FVDEP+FTDLHWGMFIPAIKGQGTDEQQQKWL
Sbjct: 64  NTLRKAAHAWKRILELRLTEEEAGWLRSFVDEPSFTDLHWGMFIPAIKGQGTDEQQQKWL 123

Query: 440 PLAFKMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEFIIHSPTLTSSKWWPGGLGKVS 619
           PLA+KMQIIGCYAQTELGHGSNVQGLETTATFDP+TDEF+IHSPTLTSSKWWPGGLGKVS
Sbjct: 124 PLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPETDEFVIHSPTLTSSKWWPGGLGKVS 183

Query: 620 THAVVYARLLTDGQEHGVHGFIVQLRSLDDHSPLPGITVGDIGMKFGNGAYNTMDNGVLQ 799
           THA+VYARL+T+GQEHGVHGFIVQLRSLDDH PLPG+T+GDIGMKFGNGAYNTMDNGVL+
Sbjct: 184 THAIVYARLITNGQEHGVHGFIVQLRSLDDHMPLPGLTIGDIGMKFGNGAYNTMDNGVLK 243

Query: 800 FDHVRIPRNQMLMRVSQ 850
           FDH+RIPRNQMLMRV Q
Sbjct: 244 FDHIRIPRNQMLMRVLQ 260


>ref|XP_002525341.1| acyl-CoA oxidase, putative [Ricinus communis]
           gi|223535400|gb|EEF37074.1| acyl-CoA oxidase, putative
           [Ricinus communis]
          Length = 664

 Score =  478 bits (1230), Expect = e-133
 Identities = 228/257 (88%), Positives = 244/257 (94%)
 Frame = +2

Query: 80  VDHLADERNKAQFDVDAMKIVWAGSQHDFNVTDRMSRLVASDPAFSKDGRTMLGRKELVK 259
           VDHLA+ERNKAQFDVD MKIVWAGS+H F+V DRM+RLVASDPAF KD R ML RKEL K
Sbjct: 4   VDHLAEERNKAQFDVDEMKIVWAGSRHAFDVADRMARLVASDPAFRKDNRAMLSRKELFK 63

Query: 260 NTLRKAAHAWKRIIELRLSEEEANKLRNFVDEPAFTDLHWGMFIPAIKGQGTDEQQQKWL 439
           NTLRKAAHAWKRIIELRLSEEEA+KLR FVDEPA+TDLHWGMF+PAIKGQGT+EQQ+KWL
Sbjct: 64  NTLRKAAHAWKRIIELRLSEEEASKLRTFVDEPAYTDLHWGMFVPAIKGQGTEEQQKKWL 123

Query: 440 PLAFKMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEFIIHSPTLTSSKWWPGGLGKVS 619
           PLA KMQIIGCYAQTELGHGSNVQGLETTATFD +TDEF+IHSPTLTSSKWWPGGLGKVS
Sbjct: 124 PLAHKMQIIGCYAQTELGHGSNVQGLETTATFDLETDEFVIHSPTLTSSKWWPGGLGKVS 183

Query: 620 THAVVYARLLTDGQEHGVHGFIVQLRSLDDHSPLPGITVGDIGMKFGNGAYNTMDNGVLQ 799
           THAVVYARL+T+G+EHGVHGFIVQLRSLDDH PLPGITVGDIGMKFG+GAYNTMDNGVL+
Sbjct: 184 THAVVYARLITEGREHGVHGFIVQLRSLDDHMPLPGITVGDIGMKFGSGAYNTMDNGVLR 243

Query: 800 FDHVRIPRNQMLMRVSQ 850
           FDHVRIPRNQMLMRV Q
Sbjct: 244 FDHVRIPRNQMLMRVMQ 260


>gb|AAW78691.1| peroxisomal acyl-CoA oxidase 1A [Solanum cheesmaniae]
          Length = 664

 Score =  471 bits (1213), Expect = e-131
 Identities = 223/257 (86%), Positives = 245/257 (95%)
 Frame = +2

Query: 80  VDHLADERNKAQFDVDAMKIVWAGSQHDFNVTDRMSRLVASDPAFSKDGRTMLGRKELVK 259
           VD+LADER KA FDVD MKIVWAGS+HDF +TDR+S+LVASDP FSK+GRTML RKEL K
Sbjct: 4   VDYLADERKKAGFDVDEMKIVWAGSRHDFELTDRISKLVASDPGFSKEGRTMLPRKELFK 63

Query: 260 NTLRKAAHAWKRIIELRLSEEEANKLRNFVDEPAFTDLHWGMFIPAIKGQGTDEQQQKWL 439
           NTLRKAA+AWKRIIELRLS+EEA  LR +VDEPAFTDLHWGMFIPAIKGQGTD+QQ+KWL
Sbjct: 64  NTLRKAAYAWKRIIELRLSQEEATMLRRYVDEPAFTDLHWGMFIPAIKGQGTDKQQEKWL 123

Query: 440 PLAFKMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEFIIHSPTLTSSKWWPGGLGKVS 619
           PLA+KMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEF+IHSPTLTSSKWWPGGLGKVS
Sbjct: 124 PLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVS 183

Query: 620 THAVVYARLLTDGQEHGVHGFIVQLRSLDDHSPLPGITVGDIGMKFGNGAYNTMDNGVLQ 799
           THAVVYARL+TDG+++GV+GFIVQLRSL+DH PLPG+TVGDIGMKFGNGAYN+MDNGVL 
Sbjct: 184 THAVVYARLITDGKDYGVNGFIVQLRSLEDHKPLPGVTVGDIGMKFGNGAYNSMDNGVLS 243

Query: 800 FDHVRIPRNQMLMRVSQ 850
           FDHVRIPR+QMLMRVSQ
Sbjct: 244 FDHVRIPRDQMLMRVSQ 260


>ref|NP_001234198.1| peroxisomal acyl-CoA oxidase 1A [Solanum lycopersicum]
           gi|58531948|gb|AAW78689.1| peroxisomal acyl-CoA oxidase
           1A [Solanum lycopersicum]
          Length = 664

 Score =  471 bits (1213), Expect = e-131
 Identities = 223/257 (86%), Positives = 245/257 (95%)
 Frame = +2

Query: 80  VDHLADERNKAQFDVDAMKIVWAGSQHDFNVTDRMSRLVASDPAFSKDGRTMLGRKELVK 259
           VD+LADER KA FDVD MKIVWAGS+HDF +TDR+S+LVASDP FSK+GRTML RKEL K
Sbjct: 4   VDYLADERKKAGFDVDEMKIVWAGSRHDFELTDRISKLVASDPGFSKEGRTMLPRKELFK 63

Query: 260 NTLRKAAHAWKRIIELRLSEEEANKLRNFVDEPAFTDLHWGMFIPAIKGQGTDEQQQKWL 439
           NTLRKAA+AWKRIIELRLS+EEA  LR +VDEPAFTDLHWGMFIPAIKGQGTD+QQ+KWL
Sbjct: 64  NTLRKAAYAWKRIIELRLSQEEATMLRRYVDEPAFTDLHWGMFIPAIKGQGTDKQQEKWL 123

Query: 440 PLAFKMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEFIIHSPTLTSSKWWPGGLGKVS 619
           PLA+KMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEF+IHSPTLTSSKWWPGGLGKVS
Sbjct: 124 PLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVS 183

Query: 620 THAVVYARLLTDGQEHGVHGFIVQLRSLDDHSPLPGITVGDIGMKFGNGAYNTMDNGVLQ 799
           THAVVYARL+TDG+++GV+GFIVQLRSL+DH PLPG+TVGDIGMKFGNGAYN+MDNGVL 
Sbjct: 184 THAVVYARLITDGKDYGVNGFIVQLRSLEDHKPLPGVTVGDIGMKFGNGAYNSMDNGVLS 243

Query: 800 FDHVRIPRNQMLMRVSQ 850
           FDHVRIPR+QMLMRVSQ
Sbjct: 244 FDHVRIPRDQMLMRVSQ 260


>pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
           gi|109157677|pdb|2FON|B Chain B, X-Ray Crystal Structure
           Of Leacx1, An Acyl-Coa Oxidase From Lycopersicon
           Esculentum (Tomato) gi|109157678|pdb|2FON|C Chain C,
           X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
          Length = 683

 Score =  471 bits (1213), Expect = e-131
 Identities = 223/257 (86%), Positives = 245/257 (95%)
 Frame = +2

Query: 80  VDHLADERNKAQFDVDAMKIVWAGSQHDFNVTDRMSRLVASDPAFSKDGRTMLGRKELVK 259
           VD+LADER KA FDVD MKIVWAGS+HDF +TDR+S+LVASDP FSK+GRTML RKEL K
Sbjct: 23  VDYLADERKKAGFDVDEMKIVWAGSRHDFELTDRISKLVASDPGFSKEGRTMLPRKELFK 82

Query: 260 NTLRKAAHAWKRIIELRLSEEEANKLRNFVDEPAFTDLHWGMFIPAIKGQGTDEQQQKWL 439
           NTLRKAA+AWKRIIELRLS+EEA  LR +VDEPAFTDLHWGMFIPAIKGQGTD+QQ+KWL
Sbjct: 83  NTLRKAAYAWKRIIELRLSQEEATMLRRYVDEPAFTDLHWGMFIPAIKGQGTDKQQEKWL 142

Query: 440 PLAFKMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEFIIHSPTLTSSKWWPGGLGKVS 619
           PLA+KMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEF+IHSPTLTSSKWWPGGLGKVS
Sbjct: 143 PLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVS 202

Query: 620 THAVVYARLLTDGQEHGVHGFIVQLRSLDDHSPLPGITVGDIGMKFGNGAYNTMDNGVLQ 799
           THAVVYARL+TDG+++GV+GFIVQLRSL+DH PLPG+TVGDIGMKFGNGAYN+MDNGVL 
Sbjct: 203 THAVVYARLITDGKDYGVNGFIVQLRSLEDHKPLPGVTVGDIGMKFGNGAYNSMDNGVLS 262

Query: 800 FDHVRIPRNQMLMRVSQ 850
           FDHVRIPR+QMLMRVSQ
Sbjct: 263 FDHVRIPRDQMLMRVSQ 279