BLASTX nr result

ID: Coptis24_contig00018295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018295
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550258.1| PREDICTED: peroxisome biogenesis factor 10-l...   149   3e-34
ref|XP_003544551.1| PREDICTED: peroxisome biogenesis factor 10-l...   145   3e-33
ref|XP_002279784.2| PREDICTED: peroxisome biogenesis factor 10-l...   145   3e-33
ref|XP_004173721.1| PREDICTED: peroxisome biogenesis factor 10-l...   144   7e-33
ref|XP_004141339.1| PREDICTED: peroxisome biogenesis factor 10-l...   144   7e-33

>ref|XP_003550258.1| PREDICTED: peroxisome biogenesis factor 10-like [Glycine max]
          Length = 394

 Score =  149 bits (375), Expect = 3e-34
 Identities = 61/79 (77%), Positives = 70/79 (88%)
 Frame = +3

Query: 21  LEKGSWASDPTSVSESQGTGGISKCTLCLSTREHPTATTCGHVFCWNCIMEWCNEKPECP 200
           ++KGSW S+ +S SE   T G+SKCTLCLS R+HPTAT+CGHVFCWNCI EWCNEKPECP
Sbjct: 317 IDKGSWVSESSS-SEYHATSGVSKCTLCLSNRQHPTATSCGHVFCWNCITEWCNEKPECP 375

Query: 201 LCRTPVTHSSLVCIYHSDF 257
           LCRTP+THSSLVC+YHSDF
Sbjct: 376 LCRTPITHSSLVCVYHSDF 394


>ref|XP_003544551.1| PREDICTED: peroxisome biogenesis factor 10-like [Glycine max]
          Length = 394

 Score =  145 bits (367), Expect = 3e-33
 Identities = 60/79 (75%), Positives = 69/79 (87%)
 Frame = +3

Query: 21  LEKGSWASDPTSVSESQGTGGISKCTLCLSTREHPTATTCGHVFCWNCIMEWCNEKPECP 200
           ++K SW S+ +S SE   T G+SKCTLCLS R+HPTAT+CGHVFCWNCI EWCNEKPECP
Sbjct: 317 IDKRSWVSESSS-SEYHATSGVSKCTLCLSNRQHPTATSCGHVFCWNCITEWCNEKPECP 375

Query: 201 LCRTPVTHSSLVCIYHSDF 257
           LCRTP+THSSLVC+YHSDF
Sbjct: 376 LCRTPITHSSLVCVYHSDF 394


>ref|XP_002279784.2| PREDICTED: peroxisome biogenesis factor 10-like [Vitis vinifera]
           gi|296081704|emb|CBI20709.3| unnamed protein product
           [Vitis vinifera]
          Length = 400

 Score =  145 bits (366), Expect = 3e-33
 Identities = 63/78 (80%), Positives = 70/78 (89%)
 Frame = +3

Query: 24  EKGSWASDPTSVSESQGTGGISKCTLCLSTREHPTATTCGHVFCWNCIMEWCNEKPECPL 203
           +KGSW SD T V ESQ +G +SKCTLCLS R+HPTAT CGHVFCW+CIMEWCNEKPECPL
Sbjct: 325 DKGSWVSDSTYV-ESQASG-VSKCTLCLSNRQHPTATPCGHVFCWSCIMEWCNEKPECPL 382

Query: 204 CRTPVTHSSLVCIYHSDF 257
           CRTP+THSSLVC+YHSDF
Sbjct: 383 CRTPLTHSSLVCLYHSDF 400


>ref|XP_004173721.1| PREDICTED: peroxisome biogenesis factor 10-like [Cucumis sativus]
          Length = 196

 Score =  144 bits (363), Expect = 7e-33
 Identities = 61/78 (78%), Positives = 66/78 (84%)
 Frame = +3

Query: 24  EKGSWASDPTSVSESQGTGGISKCTLCLSTREHPTATTCGHVFCWNCIMEWCNEKPECPL 203
           + G+W SDP S SE     GISKCTLCLS R+HPTAT CGHVFCWNCIMEWCNEKPECPL
Sbjct: 120 DSGNWVSDP-SHSEFNTGSGISKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPL 178

Query: 204 CRTPVTHSSLVCIYHSDF 257
           CRTP+ HSSLVC+YHSDF
Sbjct: 179 CRTPINHSSLVCLYHSDF 196


>ref|XP_004141339.1| PREDICTED: peroxisome biogenesis factor 10-like [Cucumis sativus]
          Length = 397

 Score =  144 bits (363), Expect = 7e-33
 Identities = 61/78 (78%), Positives = 66/78 (84%)
 Frame = +3

Query: 24  EKGSWASDPTSVSESQGTGGISKCTLCLSTREHPTATTCGHVFCWNCIMEWCNEKPECPL 203
           + G+W SDP S SE     GISKCTLCLS R+HPTAT CGHVFCWNCIMEWCNEKPECPL
Sbjct: 321 DSGNWVSDP-SHSEFNTGSGISKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPL 379

Query: 204 CRTPVTHSSLVCIYHSDF 257
           CRTP+ HSSLVC+YHSDF
Sbjct: 380 CRTPINHSSLVCLYHSDF 397


Top