BLASTX nr result
ID: Coptis24_contig00018291
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018291 (420 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001238493.1| uncharacterized protein LOC100305647 precurs... 57 1e-06 ref|NP_001238205.1| uncharacterized protein LOC100499677 precurs... 55 4e-06 gb|AAR07596.1| fiber protein Fb34 [Gossypium barbadense] 55 6e-06 gb|AEO32392.1| hypothetical protein [Amblyomma maculatum] 55 8e-06 gb|AFK33716.1| unknown [Lotus japonicus] 54 1e-05 >ref|NP_001238493.1| uncharacterized protein LOC100305647 precursor [Glycine max] gi|255626185|gb|ACU13437.1| unknown [Glycine max] Length = 185 Score = 57.4 bits (137), Expect = 1e-06 Identities = 24/39 (61%), Positives = 35/39 (89%) Frame = -2 Query: 236 AQIVTDS*KNYNHCMYDSNISTGYNVGSFLFLLANRLLI 120 A +VTD+ KNYN+C+Y+S+I+TGY VG+FLFLL +++LI Sbjct: 31 ASVVTDNEKNYNYCVYNSDIATGYGVGAFLFLLVSQVLI 69 >ref|NP_001238205.1| uncharacterized protein LOC100499677 precursor [Glycine max] gi|255625711|gb|ACU13200.1| unknown [Glycine max] Length = 185 Score = 55.5 bits (132), Expect = 4e-06 Identities = 24/39 (61%), Positives = 34/39 (87%) Frame = -2 Query: 236 AQIVTDS*KNYNHCMYDSNISTGYNVGSFLFLLANRLLI 120 A IV D+ KNYN+C+Y+S+I+TGY VG+FLFLL +++LI Sbjct: 31 ASIVPDNEKNYNYCVYNSDIATGYGVGAFLFLLVSQVLI 69 >gb|AAR07596.1| fiber protein Fb34 [Gossypium barbadense] Length = 185 Score = 55.1 bits (131), Expect = 6e-06 Identities = 25/43 (58%), Positives = 34/43 (79%) Frame = -2 Query: 236 AQIVTDS*KNYNHCMYDSNISTGYNVGSFLFLLANRLLICSTN 108 A+IV DS NYN+C+YDS ISTGY VG+FLFL+ ++ LI + + Sbjct: 31 AKIVQDSEVNYNYCVYDSYISTGYGVGAFLFLMVSQALIMAAS 73 >gb|AEO32392.1| hypothetical protein [Amblyomma maculatum] Length = 177 Score = 54.7 bits (130), Expect = 8e-06 Identities = 23/39 (58%), Positives = 33/39 (84%) Frame = -2 Query: 236 AQIVTDS*KNYNHCMYDSNISTGYNVGSFLFLLANRLLI 120 A +V D+ KNY +C+YDS+I+TGY VG+FLFLL +++LI Sbjct: 31 ANVVPDTEKNYTYCVYDSDIATGYGVGAFLFLLVSQVLI 69 >gb|AFK33716.1| unknown [Lotus japonicus] Length = 186 Score = 54.3 bits (129), Expect = 1e-05 Identities = 23/39 (58%), Positives = 34/39 (87%) Frame = -2 Query: 236 AQIVTDS*KNYNHCMYDSNISTGYNVGSFLFLLANRLLI 120 A+IV DS NYN+C+Y+S+I+TGY VG+FLFL+ +++LI Sbjct: 31 AKIVLDSEANYNYCVYNSDIATGYGVGAFLFLMVSQILI 69