BLASTX nr result

ID: Coptis24_contig00018291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018291
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238493.1| uncharacterized protein LOC100305647 precurs...    57   1e-06
ref|NP_001238205.1| uncharacterized protein LOC100499677 precurs...    55   4e-06
gb|AAR07596.1| fiber protein Fb34 [Gossypium barbadense]               55   6e-06
gb|AEO32392.1| hypothetical protein [Amblyomma maculatum]              55   8e-06
gb|AFK33716.1| unknown [Lotus japonicus]                               54   1e-05

>ref|NP_001238493.1| uncharacterized protein LOC100305647 precursor [Glycine max]
           gi|255626185|gb|ACU13437.1| unknown [Glycine max]
          Length = 185

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/39 (61%), Positives = 35/39 (89%)
 Frame = -2

Query: 236 AQIVTDS*KNYNHCMYDSNISTGYNVGSFLFLLANRLLI 120
           A +VTD+ KNYN+C+Y+S+I+TGY VG+FLFLL +++LI
Sbjct: 31  ASVVTDNEKNYNYCVYNSDIATGYGVGAFLFLLVSQVLI 69


>ref|NP_001238205.1| uncharacterized protein LOC100499677 precursor [Glycine max]
           gi|255625711|gb|ACU13200.1| unknown [Glycine max]
          Length = 185

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 24/39 (61%), Positives = 34/39 (87%)
 Frame = -2

Query: 236 AQIVTDS*KNYNHCMYDSNISTGYNVGSFLFLLANRLLI 120
           A IV D+ KNYN+C+Y+S+I+TGY VG+FLFLL +++LI
Sbjct: 31  ASIVPDNEKNYNYCVYNSDIATGYGVGAFLFLLVSQVLI 69


>gb|AAR07596.1| fiber protein Fb34 [Gossypium barbadense]
          Length = 185

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = -2

Query: 236 AQIVTDS*KNYNHCMYDSNISTGYNVGSFLFLLANRLLICSTN 108
           A+IV DS  NYN+C+YDS ISTGY VG+FLFL+ ++ LI + +
Sbjct: 31  AKIVQDSEVNYNYCVYDSYISTGYGVGAFLFLMVSQALIMAAS 73


>gb|AEO32392.1| hypothetical protein [Amblyomma maculatum]
          Length = 177

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/39 (58%), Positives = 33/39 (84%)
 Frame = -2

Query: 236 AQIVTDS*KNYNHCMYDSNISTGYNVGSFLFLLANRLLI 120
           A +V D+ KNY +C+YDS+I+TGY VG+FLFLL +++LI
Sbjct: 31  ANVVPDTEKNYTYCVYDSDIATGYGVGAFLFLLVSQVLI 69


>gb|AFK33716.1| unknown [Lotus japonicus]
          Length = 186

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/39 (58%), Positives = 34/39 (87%)
 Frame = -2

Query: 236 AQIVTDS*KNYNHCMYDSNISTGYNVGSFLFLLANRLLI 120
           A+IV DS  NYN+C+Y+S+I+TGY VG+FLFL+ +++LI
Sbjct: 31  AKIVLDSEANYNYCVYNSDIATGYGVGAFLFLMVSQILI 69


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