BLASTX nr result
ID: Coptis24_contig00018289
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00018289
(1511 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|... 514 e-143
ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|... 499 e-139
ref|XP_002514810.1| ATP binding protein, putative [Ricinus commu... 492 e-136
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-... 488 e-135
emb|CBI17597.3| unnamed protein product [Vitis vinifera] 488 e-135
>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
dicer-like protein [Populus trichocarpa]
Length = 1408
Score = 514 bits (1325), Expect = e-143
Identities = 264/423 (62%), Positives = 321/423 (75%), Gaps = 2/423 (0%)
Frame = +2
Query: 2 PSIMHRIESIVLALNLKKLQTGHLISNIQIPTMKILEAITTKNCQEEFSLESLETLGDSF 181
PSIMHR+ES+++A+NLKK+ + H + N+ IP MK+LEAITTK CQE+F LESLETLGDSF
Sbjct: 951 PSIMHRLESLLIAVNLKKMHSDHCMQNVDIPAMKVLEAITTKKCQEKFHLESLETLGDSF 1010
Query: 182 LKYAVSQQLFKRNKNHHEGLLTTHRQRMVSNSALCNLGCKCKLQGFVRYECFDPKCWVVP 361
LKYA SQQLFK +NHHEGLL+ +++++SN+ALC GC KL GF+R E FDPK W++P
Sbjct: 1011 LKYAASQQLFKLYQNHHEGLLSMKKEKIISNAALCRRGCDHKLPGFIRNESFDPKLWMIP 1070
Query: 362 GD-LGLSGLVEASFSTSGQLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAALHFLDWL 538
GD G L E S ++YV G R +K+K +ADVVE LIGAYL+ GGE AL F+DW+
Sbjct: 1071 GDKCGSDLLSEEPLSECRKIYVRGRRKVKSKTVADVVEALIGAYLSTGGEVLALFFMDWI 1130
Query: 539 GLKVDFSEEISNGVQFAMQPERHINVVELESLLDYRFRDQSLLLEALTHGSYQLPGISRC 718
G+KVDF + F +Q E+ +NV LESLL+Y FRD SLL+EALTHGSY LP I C
Sbjct: 1131 GIKVDFMI-VPYERHFQLQAEKFVNVRYLESLLNYSFRDPSLLVEALTHGSYMLPEIPSC 1189
Query: 719 YQRLEFLGDSVLDFLITWHMYNIYPGISPGQLTDLRSSAVNNDCYAFAAVKKGLHKHILH 898
YQRLEFLGD+VLD+LIT H+Y YPG+SPG LTDLRS++VNNDCYA +AVK LHKHILH
Sbjct: 1190 YQRLEFLGDAVLDYLITMHLYKEYPGMSPGLLTDLRSASVNNDCYAQSAVKGDLHKHILH 1249
Query: 899 ASSLLHERIKNFAESFGKSSLQSTDGWESETIVPKVLGDIIESLAGAILVDSGYSKEIVW 1078
S LH+ I AE F KSSL ST GWESET PKVLGD+IESLAGAILVDSGY+KEIV+
Sbjct: 1250 TSQDLHKHIVETAEIFQKSSLGSTFGWESETSFPKVLGDVIESLAGAILVDSGYNKEIVF 1309
Query: 1079 NCMRPILEPLATLDTMKLHPVKELGELCLRNSYDNKTS-PSYVDGKASITIVVKANGVSY 1255
+RP+LEPL T T++LHP +EL ELC + +D K S SY ASITIVV ANGV++
Sbjct: 1310 QSIRPLLEPLITPATVRLHPARELSELCQKQHFDYKKSVVSYNGRNASITIVVGANGVTF 1369
Query: 1256 TAT 1264
T
Sbjct: 1370 KHT 1372
>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|222852017|gb|EEE89564.1|
dicer-like protein [Populus trichocarpa]
Length = 1468
Score = 499 bits (1286), Expect = e-139
Identities = 254/424 (59%), Positives = 321/424 (75%), Gaps = 3/424 (0%)
Frame = +2
Query: 2 PSIMHRIESIVLALNLKKLQTGHLISNIQIPTMKILEAITTKNCQEEFSLESLETLGDSF 181
PSIMHR+ES+++A+NLKK+ + H + ++ IP+MK+LEAITT CQE F+LESLETLGDSF
Sbjct: 1012 PSIMHRLESLLIAVNLKKMHSDHYLQHVNIPSMKVLEAITTNKCQENFNLESLETLGDSF 1071
Query: 182 LKYAVSQQLFKRNKNHHEGLLTTHRQRMVSNSALCNLGCKCKLQGFVRYECFDPKCWVVP 361
LKYA SQQLFK +NHHEGLL+ + +++SN+ALC GC KLQGF+R E FDPK W++P
Sbjct: 1072 LKYAASQQLFKIYQNHHEGLLSFKKDKIISNAALCRRGCNHKLQGFIRNESFDPKLWIIP 1131
Query: 362 GD-LGLSGLVEASFSTSGQLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAALHFLDWL 538
G LG L E S ++Y+ G R +K+K IADVVE LIGAYL+ GGE AL F+DW+
Sbjct: 1132 GGKLGSDFLSEEPLSKGRKIYIRGRRKVKSKTIADVVEALIGAYLSTGGEVTALLFMDWI 1191
Query: 539 GLKVDF-SEEISNGVQFAMQPERHINVVELESLLDYRFRDQSLLLEALTHGSYQLPGISR 715
G+KVDF + +Q +Q E+ +NV LESLL+Y F D SLL+EALTHGSY LP I R
Sbjct: 1192 GIKVDFMNTPYERHIQ--LQAEKFVNVRYLESLLNYSFNDPSLLVEALTHGSYMLPEIPR 1249
Query: 716 CYQRLEFLGDSVLDFLITWHMYNIYPGISPGQLTDLRSSAVNNDCYAFAAVKKGLHKHIL 895
CYQRLEFLGD+VLD+LIT HMY YPG+SPG LTDLRS++VNNDCYA +AVK GL +HIL
Sbjct: 1250 CYQRLEFLGDAVLDYLITLHMYKEYPGMSPGLLTDLRSASVNNDCYALSAVKVGLDRHIL 1309
Query: 896 HASSLLHERIKNFAESFGKSSLQSTDGWESETIVPKVLGDIIESLAGAILVDSGYSKEIV 1075
HAS LH+ I + + SL+ST GWESET PKVLGD+IESLAGAILVDSGY+KE+V
Sbjct: 1310 HASHDLHKHIVATVKKIQEFSLESTFGWESETAFPKVLGDVIESLAGAILVDSGYNKEVV 1369
Query: 1076 WNCMRPILEPLATLDTMKLHPVKELGELCLRNSYDNKTSPSYVDGK-ASITIVVKANGVS 1252
+ +RP+LEPL T +T++L PV+EL ELC R +D K +G+ AS+TI V+ANG+
Sbjct: 1370 FESIRPLLEPLITPETLRLQPVRELNELCQRQHFDYKKPIVSRNGRNASVTIEVEANGLI 1429
Query: 1253 YTAT 1264
+ T
Sbjct: 1430 FKHT 1433
>ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
gi|223545861|gb|EEF47364.1| ATP binding protein, putative
[Ricinus communis]
Length = 1388
Score = 492 bits (1266), Expect = e-136
Identities = 247/424 (58%), Positives = 317/424 (74%), Gaps = 3/424 (0%)
Frame = +2
Query: 2 PSIMHRIESIVLALNLKKLQTGHLISNIQIPTMKILEAITTKNCQEEFSLESLETLGDSF 181
PSIMHR+ES+++A NLKKL H + ++ IPT+K+LEAITTK CQE+F LESLETLGDSF
Sbjct: 939 PSIMHRLESLLIASNLKKLHLDHCMQSVAIPTIKVLEAITTKKCQEKFHLESLETLGDSF 998
Query: 182 LKYAVSQQLFKRNKNHHEGLLTTHRQRMVSNSALCNLGCKCKLQGFVRYECFDPKCWVVP 361
LKYAV QQLFK +NHHEGLL+ + +++SN+ LC LGC K+ GF+R E FDPK W++P
Sbjct: 999 LKYAVGQQLFKTYQNHHEGLLSIKKDKLISNATLCRLGCDSKIPGFIRNESFDPKNWLIP 1058
Query: 362 GDL-GLSGLVEASFSTSGQLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAALHFLDWL 538
++ G L E S ++Y+ R +K K+IADVVE LIGAYL+ GGE A L FLDW+
Sbjct: 1059 DEISGCYSLSEEILSNGRKMYIKRRRKLKEKMIADVVEALIGAYLSTGGEIAGLLFLDWI 1118
Query: 539 GLKVDF-SEEISNGVQFAMQPERHINVVELESLLDYRFRDQSLLLEALTHGSYQLPGISR 715
G+K DF + G F M PE+++N+ LESLL Y FRD LL+EALTHGSY LP I R
Sbjct: 1119 GIKADFLNMPYERG--FEMNPEKYVNICHLESLLKYSFRDPCLLVEALTHGSYMLPEIPR 1176
Query: 716 CYQRLEFLGDSVLDFLITWHMYNIYPGISPGQLTDLRSSAVNNDCYAFAAVKKGLHKHIL 895
CYQRLEFLGDSVLD+LIT H+Y YPG+SPG LTD+RS++VNNDCYA +AV++GLHK+IL
Sbjct: 1177 CYQRLEFLGDSVLDYLITVHLYEKYPGMSPGLLTDMRSASVNNDCYAQSAVREGLHKYIL 1236
Query: 896 HASSLLHERIKNFAESFGKSSLQSTDGWESETIVPKVLGDIIESLAGAILVDSGYSKEIV 1075
HAS LH+ I + + + S +ST GWESE PKVLGD+IESLAGAI VDSGY+KE+V
Sbjct: 1237 HASQKLHKDIVSTVANCKEFSSESTFGWESEISFPKVLGDVIESLAGAIFVDSGYNKEVV 1296
Query: 1076 WNCMRPILEPLATLDTMKLHPVKELGELCLRNSYD-NKTSPSYVDGKASITIVVKANGVS 1252
+N +RP+LEPL T +T++LHP +EL ELC + +D K S +G + +T+ V+ANGV
Sbjct: 1297 FNSIRPLLEPLITPETIRLHPTRELTELCQKQHFDRRKPVVSRNNGMSCVTVEVEANGVV 1356
Query: 1253 YTAT 1264
+ T
Sbjct: 1357 FKHT 1360
>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
Length = 1394
Score = 488 bits (1256), Expect = e-135
Identities = 251/422 (59%), Positives = 317/422 (75%), Gaps = 1/422 (0%)
Frame = +2
Query: 2 PSIMHRIESIVLALNLKKLQTGHLISNIQIPTMKILEAITTKNCQEEFSLESLETLGDSF 181
PSIMHRIES++LA+NLK + + N IPT K+LEAITTK+CQE F LESLETLGDSF
Sbjct: 946 PSIMHRIESLLLAVNLKNIHLNYCKQN-DIPTFKVLEAITTKHCQEGFHLESLETLGDSF 1004
Query: 182 LKYAVSQQLFKRNKNHHEGLLTTHRQRMVSNSALCNLGCKCKLQGFVRYECFDPKCWVVP 361
LKYA SQQLFK +NHHEGLL+ ++R++SN++LC LGC KL GF+R E FDPK W++
Sbjct: 1005 LKYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIA 1064
Query: 362 GDLGLSGLV-EASFSTSGQLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAALHFLDWL 538
GD S + E S++ ++YV R +K+K IADVVE LIGA+L+ GGE AAL F+ WL
Sbjct: 1065 GDQSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVEALIGAFLSTGGETAALIFMRWL 1124
Query: 539 GLKVDFSEEISNGVQFAMQPERHINVVELESLLDYRFRDQSLLLEALTHGSYQLPGISRC 718
G+ VDF + + F + +RH+NV LES+L+Y FRD SLL+EALTHGSY LP I RC
Sbjct: 1125 GINVDFVK-VPYKRDFPVILKRHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRC 1183
Query: 719 YQRLEFLGDSVLDFLITWHMYNIYPGISPGQLTDLRSSAVNNDCYAFAAVKKGLHKHILH 898
YQRLEFLGD+VLD+L+T H+Y+ YPG+SPG LTDLRS++VNNDCYA +AVK LH+HILH
Sbjct: 1184 YQRLEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILH 1243
Query: 899 ASSLLHERIKNFAESFGKSSLQSTDGWESETIVPKVLGDIIESLAGAILVDSGYSKEIVW 1078
+S LH I +F K ++ST GWESE+ PKVLGD+IESLAGAILVDS Y+KE+V+
Sbjct: 1244 SSQELHRHIVVTVGNFDKLPVESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVF 1303
Query: 1079 NCMRPILEPLATLDTMKLHPVKELGELCLRNSYDNKTSPSYVDGKASITIVVKANGVSYT 1258
+RP+LEPL T +T+KLHP +ELGELC + YD K +GKAS+TI V+ANG +
Sbjct: 1304 QSIRPLLEPLITPETVKLHPARELGELCQKEHYDIKRVVVSQNGKASVTIEVEANGAKHK 1363
Query: 1259 AT 1264
T
Sbjct: 1364 HT 1365
>emb|CBI17597.3| unnamed protein product [Vitis vinifera]
Length = 1340
Score = 488 bits (1256), Expect = e-135
Identities = 251/422 (59%), Positives = 317/422 (75%), Gaps = 1/422 (0%)
Frame = +2
Query: 2 PSIMHRIESIVLALNLKKLQTGHLISNIQIPTMKILEAITTKNCQEEFSLESLETLGDSF 181
PSIMHRIES++LA+NLK + + N IPT K+LEAITTK+CQE F LESLETLGDSF
Sbjct: 892 PSIMHRIESLLLAVNLKNIHLNYCKQN-DIPTFKVLEAITTKHCQEGFHLESLETLGDSF 950
Query: 182 LKYAVSQQLFKRNKNHHEGLLTTHRQRMVSNSALCNLGCKCKLQGFVRYECFDPKCWVVP 361
LKYA SQQLFK +NHHEGLL+ ++R++SN++LC LGC KL GF+R E FDPK W++
Sbjct: 951 LKYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIA 1010
Query: 362 GDLGLSGLV-EASFSTSGQLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAALHFLDWL 538
GD S + E S++ ++YV R +K+K IADVVE LIGA+L+ GGE AAL F+ WL
Sbjct: 1011 GDQSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVEALIGAFLSTGGETAALIFMRWL 1070
Query: 539 GLKVDFSEEISNGVQFAMQPERHINVVELESLLDYRFRDQSLLLEALTHGSYQLPGISRC 718
G+ VDF + + F + +RH+NV LES+L+Y FRD SLL+EALTHGSY LP I RC
Sbjct: 1071 GINVDFVK-VPYKRDFPVILKRHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRC 1129
Query: 719 YQRLEFLGDSVLDFLITWHMYNIYPGISPGQLTDLRSSAVNNDCYAFAAVKKGLHKHILH 898
YQRLEFLGD+VLD+L+T H+Y+ YPG+SPG LTDLRS++VNNDCYA +AVK LH+HILH
Sbjct: 1130 YQRLEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILH 1189
Query: 899 ASSLLHERIKNFAESFGKSSLQSTDGWESETIVPKVLGDIIESLAGAILVDSGYSKEIVW 1078
+S LH I +F K ++ST GWESE+ PKVLGD+IESLAGAILVDS Y+KE+V+
Sbjct: 1190 SSQELHRHIVVTVGNFDKLPVESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVF 1249
Query: 1079 NCMRPILEPLATLDTMKLHPVKELGELCLRNSYDNKTSPSYVDGKASITIVVKANGVSYT 1258
+RP+LEPL T +T+KLHP +ELGELC + YD K +GKAS+TI V+ANG +
Sbjct: 1250 QSIRPLLEPLITPETVKLHPARELGELCQKEHYDIKRVVVSQNGKASVTIEVEANGAKHK 1309
Query: 1259 AT 1264
T
Sbjct: 1310 HT 1311