BLASTX nr result

ID: Coptis24_contig00018285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018285
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15549.3| unnamed protein product [Vitis vinifera]              391   e-106
ref|XP_003634199.1| PREDICTED: uncharacterized GPI-anchored prot...   391   e-106
ref|XP_002322090.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
gb|ABK95654.1| unknown [Populus trichocarpa]                          376   e-102
ref|XP_002533130.1| conserved hypothetical protein [Ricinus comm...   374   e-101

>emb|CBI15549.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  391 bits (1004), Expect = e-106
 Identities = 199/319 (62%), Positives = 241/319 (75%), Gaps = 4/319 (1%)
 Frame = -1

Query: 1040 LLFLHIPYYLFALPTLPEPDPASIQPFLPTPSPPDTISAFPEQSNLATCPLDLPDELFHG 861
            LL L   + L     LPEPDP  I PF P PSPP+TI AFPEQS++A CPL+LPDELFHG
Sbjct: 5    LLLLVFCFLLPIFQALPEPDPVKIHPFHPNPSPPETIPAFPEQSDVAGCPLNLPDELFHG 64

Query: 860  IGHACS-GKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGK---MAVTPYDLPILPEDS 693
            I  ACS GK  +G+L RS+CCPVLAAWLYSAY+GTALGRA +      TPYDLP+LP+DS
Sbjct: 65   IKTACSAGKGASGELRRSRCCPVLAAWLYSAYSGTALGRAKRGLAPEATPYDLPLLPDDS 124

Query: 692  ESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEAFRVSKEGKLVGDKSVR 513
            E+CV++L K+LK RG+EL +PNETCDVVYC+C IRLHPLSCPEAF VS +GKLVGD+SV+
Sbjct: 125  ETCVNDLEKSLKSRGVELVKPNETCDVVYCFCGIRLHPLSCPEAFSVSSKGKLVGDESVK 184

Query: 512  MLENDCLNNNKSHLSLARCSKCLNRLYQLKEENSMDTTRKSDRKSKMHSRDCELMGLTWL 333
             LE DCL+ N     L  CSKCLN LY L ++ + ++++   R  KMH+RDCELMGLTWL
Sbjct: 185  KLERDCLSTN-GFPGLGGCSKCLNTLYLLGKDKTGNSSKLEARSRKMHNRDCELMGLTWL 243

Query: 332  LSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDSAELDDKSSSNKRLLTT 153
            L+KNRTAYIHTV+AVLRA+M+S DGS P SC+L SDG+PLAVDSAE+   SSS     T+
Sbjct: 244  LAKNRTAYIHTVSAVLRAIMMSTDGSDPLSCTLNSDGMPLAVDSAEISSHSSS-----TS 298

Query: 152  SGALVHVCAIIIFVLSFRF 96
                +H+C   I  LSF +
Sbjct: 299  LHFSIHLC---ILSLSFLY 314


>ref|XP_003634199.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Vitis
            vinifera]
          Length = 327

 Score =  391 bits (1004), Expect = e-106
 Identities = 199/319 (62%), Positives = 241/319 (75%), Gaps = 4/319 (1%)
 Frame = -1

Query: 1040 LLFLHIPYYLFALPTLPEPDPASIQPFLPTPSPPDTISAFPEQSNLATCPLDLPDELFHG 861
            LL L   + L     LPEPDP  I PF P PSPP+TI AFPEQS++A CPL+LPDELFHG
Sbjct: 5    LLLLVFCFLLPIFQALPEPDPVKIHPFHPNPSPPETIPAFPEQSDVAGCPLNLPDELFHG 64

Query: 860  IGHACS-GKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGK---MAVTPYDLPILPEDS 693
            I  ACS GK  +G+L RS+CCPVLAAWLYSAY+GTALGRA +      TPYDLP+LP+DS
Sbjct: 65   IKTACSAGKGASGELRRSRCCPVLAAWLYSAYSGTALGRAKRGLAPEATPYDLPLLPDDS 124

Query: 692  ESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEAFRVSKEGKLVGDKSVR 513
            E+CV++L K+LK RG+EL +PNETCDVVYC+C IRLHPLSCPEAF VS +GKLVGD+SV+
Sbjct: 125  ETCVNDLEKSLKSRGVELVKPNETCDVVYCFCGIRLHPLSCPEAFSVSSKGKLVGDESVK 184

Query: 512  MLENDCLNNNKSHLSLARCSKCLNRLYQLKEENSMDTTRKSDRKSKMHSRDCELMGLTWL 333
             LE DCL+ N     L  CSKCLN LY L ++ + ++++   R  KMH+RDCELMGLTWL
Sbjct: 185  KLERDCLSTN-GFPGLGGCSKCLNTLYLLGKDKTGNSSKLEARSRKMHNRDCELMGLTWL 243

Query: 332  LSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDSAELDDKSSSNKRLLTT 153
            L+KNRTAYIHTV+AVLRA+M+S DGS P SC+L SDG+PLAVDSAE+   SSS     T+
Sbjct: 244  LAKNRTAYIHTVSAVLRAIMMSTDGSDPLSCTLNSDGMPLAVDSAEISSHSSS-----TS 298

Query: 152  SGALVHVCAIIIFVLSFRF 96
                +H+C   I  LSF +
Sbjct: 299  LHFSIHLC---ILSLSFLY 314


>ref|XP_002322090.1| predicted protein [Populus trichocarpa] gi|222869086|gb|EEF06217.1|
            predicted protein [Populus trichocarpa]
          Length = 334

 Score =  377 bits (968), Expect = e-102
 Identities = 191/324 (58%), Positives = 235/324 (72%), Gaps = 11/324 (3%)
 Frame = -1

Query: 1043 FLLFLHIPYYLFALPTLPEPDPASIQPFLPTPSPPDTISAFPEQSNLATCPLDLPDELFH 864
            FLL L +  +   LP LP PD A+IQPF P PSPP  I AFPEQSNLA CPLDLP+ELFH
Sbjct: 8    FLLLLAL--FPLLLPGLPNPDTATIQPFKPNPSPPAIIPAFPEQSNLAGCPLDLPNELFH 65

Query: 863  GIGHAC-SGKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGKMAVTP-------YDLPI 708
            GI  AC SG +  G L R++CCPVLAAWLYSAY+ TAL RA K+           YD+P+
Sbjct: 66   GINSACGSGSSATGHLHRTRCCPVLAAWLYSAYSATALSRANKVIPATDTGRSPSYDMPL 125

Query: 707  LPEDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEAFRVSKEGKLVG 528
            LP+DSE+CVD L K LK +GIEL +PNETCDVVYCYC IRLHPLSCPEAF +++ GKLVG
Sbjct: 126  LPDDSETCVDGLSKGLKEKGIELFKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGKLVG 185

Query: 527  DKSVRMLENDCL---NNNKSHLSLARCSKCLNRLYQLKEENSMDTTRKSDRKSKMHSRDC 357
            DK V  LE +CL   NN      L  CSKCLN LY L  + ++++++  DR +KMH++DC
Sbjct: 186  DKRVEKLERNCLSDSNNVNGFPGLGGCSKCLNSLYLLNNKKALNSSKSEDRTTKMHNKDC 245

Query: 356  ELMGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDSAELDDKSS 177
            +LMGLTWLL+KNRTAYIHTVTAVLRA+M+S DGS P+SC+L+SDG+PL VDS+E+     
Sbjct: 246  QLMGLTWLLAKNRTAYIHTVTAVLRAMMMSIDGSDPRSCTLSSDGMPLPVDSSEI----- 300

Query: 176  SNKRLLTTSGALVHVCAIIIFVLS 105
            SN     +  A ++V   +I +LS
Sbjct: 301  SNNSFSISHQAPIYVTIAVICLLS 324


>gb|ABK95654.1| unknown [Populus trichocarpa]
          Length = 334

 Score =  376 bits (965), Expect = e-102
 Identities = 190/324 (58%), Positives = 235/324 (72%), Gaps = 11/324 (3%)
 Frame = -1

Query: 1043 FLLFLHIPYYLFALPTLPEPDPASIQPFLPTPSPPDTISAFPEQSNLATCPLDLPDELFH 864
            FLL L +  +   LP LP PD A+IQPF P PSPP  I AFPEQSNLA CPLDLP+ELFH
Sbjct: 8    FLLLLAL--FPLLLPGLPNPDTATIQPFKPNPSPPAIIPAFPEQSNLAGCPLDLPNELFH 65

Query: 863  GIGHAC-SGKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGKMAVTP-------YDLPI 708
            GI  AC SG +  G L R++CCPVLAAWLYSAY+ TAL RA ++           YD+P+
Sbjct: 66   GINSACGSGSSATGHLHRTRCCPVLAAWLYSAYSATALSRANRVIPATDTGRSPSYDMPL 125

Query: 707  LPEDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEAFRVSKEGKLVG 528
            LP+DSE+CVD L K LK +GIEL +PNETCDVVYCYC IRLHPLSCPEAF +++ GKLVG
Sbjct: 126  LPDDSETCVDGLSKGLKEKGIELFKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGKLVG 185

Query: 527  DKSVRMLENDCL---NNNKSHLSLARCSKCLNRLYQLKEENSMDTTRKSDRKSKMHSRDC 357
            DK V  LE +CL   NN      L  CSKCLN LY L  + ++++++  DR +KMH++DC
Sbjct: 186  DKRVEKLERNCLSDSNNVNGFPGLGGCSKCLNSLYLLNNKKALNSSKSEDRTTKMHNKDC 245

Query: 356  ELMGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDSAELDDKSS 177
            +LMGLTWLL+KNRTAYIHTVTAVLRA+M+S DGS P+SC+L+SDG+PL VDS+E+     
Sbjct: 246  QLMGLTWLLAKNRTAYIHTVTAVLRAMMMSIDGSDPRSCTLSSDGMPLPVDSSEI----- 300

Query: 176  SNKRLLTTSGALVHVCAIIIFVLS 105
            SN     +  A ++V   +I +LS
Sbjct: 301  SNNSFSISHQAPIYVTIAVICLLS 324


>ref|XP_002533130.1| conserved hypothetical protein [Ricinus communis]
            gi|223527074|gb|EEF29257.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 330

 Score =  374 bits (961), Expect = e-101
 Identities = 185/325 (56%), Positives = 240/325 (73%), Gaps = 7/325 (2%)
 Frame = -1

Query: 1049 LFFLLFLHIPYYLFALPTLPEPDPASIQPFLPTPSPPDTISAFPEQSNLATCPLDLPDEL 870
            LF  LF  +P+  F +  +  PDP +IQ FLP PSPP TI AFPEQSN+A CPLD+PDEL
Sbjct: 7    LFLFLFTILPFP-FLISGVSNPDPVTIQSFLPNPSPPATIPAFPEQSNIAGCPLDIPDEL 65

Query: 869  FHGIGHACSGKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGKMAVTP----YDLPILP 702
            FH +  AC   N   QL +S+CCPVLAAWLY+AY+ TALGRA ++A       YD+P+LP
Sbjct: 66   FHSVKSACG--NGQQQLHKSRCCPVLAAWLYAAYSATALGRAARVAPATVAGAYDMPLLP 123

Query: 701  EDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEAFRVSKEGKLVGDK 522
            +DSE+CVD+LGKAL  +G+EL +PNETCD+VYCYC IRLHPLSC EAF  ++EGKLVGDK
Sbjct: 124  DDSETCVDDLGKALSQKGVELVRPNETCDLVYCYCGIRLHPLSCSEAFSTNQEGKLVGDK 183

Query: 521  SVRMLENDCLNN--NKSHL-SLARCSKCLNRLYQLKEENSMDTTRKSDRKSKMHSRDCEL 351
             V  LE DCL++  N +H   L  CSKCLN LY L  + ++++++  DR +KMH++DC+L
Sbjct: 184  RVHKLERDCLSSSTNVNHFPGLGGCSKCLNALYLLNNKKTLNSSKSDDRTTKMHNKDCQL 243

Query: 350  MGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDSAELDDKSSSN 171
            MGLTWLL+ NRTAYIHTV+AVLRA+M++ D S+PQSC+L SDG+PLAVDS+E+     SN
Sbjct: 244  MGLTWLLATNRTAYIHTVSAVLRAMMMNVDSSNPQSCTLGSDGMPLAVDSSEI-----SN 298

Query: 170  KRLLTTSGALVHVCAIIIFVLSFRF 96
              L  T  A +++  ++I +L   F
Sbjct: 299  NSLSVTHQAPIYLSVVLICLLHILF 323


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