BLASTX nr result

ID: Coptis24_contig00018283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018283
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278117.2| PREDICTED: probable LRR receptor-like serine...   112   3e-23
emb|CBI19974.3| unnamed protein product [Vitis vinifera]              112   3e-23
emb|CAN82376.1| hypothetical protein VITISV_024048 [Vitis vinifera]   107   8e-22
emb|CAN81714.1| hypothetical protein VITISV_005816 [Vitis vinifera]   107   8e-22
ref|XP_003633276.1| PREDICTED: probable LRR receptor-like serine...   107   1e-21

>ref|XP_002278117.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1067

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/107 (49%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3    TSCDVYSYGIVVLETFTRKRPTDDLFIEGQTLTQWVNTSYPEKVMDVTDADLLTNEDRSI 182
            T  DVYSYGI+++ETFTRK+PT ++F+ G +L QWV++S+P+ +M+V DA+LL  +  + 
Sbjct: 961  TKGDVYSYGIMLMETFTRKKPTHEMFVGGLSLRQWVDSSFPDLIMEVVDANLLARDQNNT 1020

Query: 183  S-NRRHCLSSIIELALECSRHLPEERIQMNEVVVRLTKIQSEALSST 320
            + N + CL SI+ L L+CS   PE+R+ M EVVVRL+KI+ + +S T
Sbjct: 1021 NGNLQTCLLSIMGLGLQCSLDSPEQRLDMKEVVVRLSKIRQQYISQT 1067


>emb|CBI19974.3| unnamed protein product [Vitis vinifera]
          Length = 902

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/107 (49%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3    TSCDVYSYGIVVLETFTRKRPTDDLFIEGQTLTQWVNTSYPEKVMDVTDADLLTNEDRSI 182
            T  DVYSYGI+++ETFTRK+PT ++F+ G +L QWV++S+P+ +M+V DA+LL  +  + 
Sbjct: 796  TKGDVYSYGIMLMETFTRKKPTHEMFVGGLSLRQWVDSSFPDLIMEVVDANLLARDQNNT 855

Query: 183  S-NRRHCLSSIIELALECSRHLPEERIQMNEVVVRLTKIQSEALSST 320
            + N + CL SI+ L L+CS   PE+R+ M EVVVRL+KI+ + +S T
Sbjct: 856  NGNLQTCLLSIMGLGLQCSLDSPEQRLDMKEVVVRLSKIRQQYISQT 902


>emb|CAN82376.1| hypothetical protein VITISV_024048 [Vitis vinifera]
          Length = 646

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/125 (46%), Positives = 80/125 (64%)
 Frame = +3

Query: 3   TSCDVYSYGIVVLETFTRKRPTDDLFIEGQTLTQWVNTSYPEKVMDVTDADLLTNEDRSI 182
           T  D+YSYGI+++ETF RK+PTD++F+E  TL  WV +S    +M+V D DLL  ED  I
Sbjct: 521 TKGDIYSYGIMLMETFVRKKPTDEMFMEELTLKSWVESS-ANNIMEVIDVDLLIEEDEKI 579

Query: 183 SNRRHCLSSIIELALECSRHLPEERIQMNEVVVRLTKIQSEALSSTLKTPNSPT*QYSSE 362
           S R  C SSII LAL+C+   PE+RI M +VVVRL KI ++     ++TP     ++  +
Sbjct: 580 SLRPACFSSIITLALDCTVEPPEKRINMKDVVVRLKKILNQIYD--VRTPQLRKNRHEDQ 637

Query: 363 VRVGH 377
           V   H
Sbjct: 638 VPFFH 642


>emb|CAN81714.1| hypothetical protein VITISV_005816 [Vitis vinifera]
          Length = 1420

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/101 (50%), Positives = 72/101 (71%)
 Frame = +3

Query: 3    TSCDVYSYGIVVLETFTRKRPTDDLFIEGQTLTQWVNTSYPEKVMDVTDADLLTNEDRSI 182
            T CD YSYGI+++E F RK+PTD++F+E  TL  WV +S    +M+V DA+LLT ED S 
Sbjct: 1097 TKCDTYSYGIILMEIFVRKKPTDEMFVEELTLKSWVESS-ANNIMEVIDANLLTEEDESF 1155

Query: 183  SNRRHCLSSIIELALECSRHLPEERIQMNEVVVRLTKIQSE 305
            + ++ C SSI+ LAL+C+   PE+RI M +VV RL KI ++
Sbjct: 1156 ALKQACFSSIMTLALDCTIEPPEKRINMKDVVARLKKILNQ 1196



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/103 (42%), Positives = 62/103 (60%)
 Frame = +3

Query: 3    TSCDVYSYGIVVLETFTRKRPTDDLFIEGQTLTQWVNTSYPEKVMDVTDADLLTNEDRSI 182
            T  DV+SYGI++++ F R +P D++F    +L   V  S  + + +V DA LL  +D   
Sbjct: 1318 TKGDVFSYGIMLMDVFARNKPMDEMFNGDLSLKSLVE-SLADSMKEVVDATLLRRDDEDF 1376

Query: 183  SNRRHCLSSIIELALECSRHLPEERIQMNEVVVRLTKIQSEAL 311
            + +  CLSSI+ LAL C+    EERI M +VVVRL KI  E L
Sbjct: 1377 ATKLSCLSSIMALALTCTTDSLEERIDMKDVVVRLMKIIIELL 1419


>ref|XP_003633276.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1202

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/110 (49%), Positives = 77/110 (70%)
 Frame = +3

Query: 3    TSCDVYSYGIVVLETFTRKRPTDDLFIEGQTLTQWVNTSYPEKVMDVTDADLLTNEDRSI 182
            T  D+YSYGI+++ETF RK+PTD++F+E  TL  WV +S    +M+V DA+LLT ED S 
Sbjct: 1096 TKGDIYSYGILLMETFVRKKPTDEMFVEELTLKSWVESS-TNNIMEVIDANLLTEEDESF 1154

Query: 183  SNRRHCLSSIIELALECSRHLPEERIQMNEVVVRLTKIQSEALSSTLKTP 332
            + +R C SSI+ LAL+C+   PE+RI   +VVVRL K+ ++     L+TP
Sbjct: 1155 ALKRACFSSIMTLALDCTVEPPEKRINTKDVVVRLKKLLNQI--DVLRTP 1202


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